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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR TARGETING AND ELONGATION ARREST OF BACI SIGNAL RECOGNITION PARTICLE
Keywords SIGNAL RECOGNITION PARTICLE (SRP), STALLED-RIBOSOME, TRANSLA TRANSLOCATION, MIFM STALLING
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4UE4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 266 5685 0
2  Protein   FTSQ SIGNAL SEQUENCE  B 22 88 0
3  Protein   SIGNAL RECOGNITION PARTICLE PROTEIN  C 102 408 0
total       390 6181 0

Proteins
Unit 2 LEU10 PHE11 LEU12 LEU13 THR14 VAL15 CYS16 THR17 THR18 VAL19 LEU20 VAL21 SER22 GLY23 TRP24 VAL25 VAL26 LEU27 GLY28 TRP29 MET30 GLU31
Unit 3 THR330 LEU331 ASP332 ASP333 PHE334 LEU335 GLU336 GLN337 LEU338 GLY339 GLN340 VAL341 ARG342 ASN343 MET344 GLY345 PRO346 LEU347 ASP348 GLU349 LEU350 LEU351 GLN352 MET353 MET354 PRO355 GLY356 ALA357 GLY358 LYS359 MET360 LYS361 GLY362 LEU363 LYS364 ASN365 ILE366 GLN367 VAL368 ASP369 GLU370 LYS371 GLN372 LEU373 ASN374 HIS375 VAL376 GLU377 ALA378 ILE379 ILE380 LYS381 SER382 MET383 THR384 VAL385 LEU386 GLU387 LYS388 GLU389 GLN390 PRO391 ASP392 ILE393 ILE394 ASN395 ALA396 SER397 ARG398 ARG399 LYS400 ARG401 ILE402 ALA403 LYS404 GLY405 SER406 GLY407 THR408 SER409 VAL410 GLN411 GLU412 VAL413 ASN414 ARG415 LEU416 LEU417 LYS418 GLN419 PHE420 ASP421 GLU422 MET423 LYS424 LYS425 MET426 MET427 LYS428 GLN429 MET430 THR431

Nucleic acids
Unit 1 G4 C5 C6 G7 U8 G9 C10 U11 A12 A13 G14 C15 G16 G17 G18 G19 A20 G21 G22 U23 A24 G25 C26 G27 G28 U29 G30 C31 C32 C33 U34 G35 U36 A37 C38 C39 U40 G41 C42 A43 A44 U45 C46 C47 G48 C49 U50 C51 U52 A53 G54 C55 A56 G57 G58 G59 C60 C61 G62 A63 A64 U65 C66 C67 C68 U69 U70 C71 U72 C73 G74 A75 G76 G77 U78 U79 C80 G81 U82 U83 U84 A85 C86 U87 U88 U89 A90 A91 G92 G93 C94 C95 U96 G97 C98 C99 U100 U101 A102 A103 G104 U105 A106 A107 G108 U109 G110 G111 U112 G113 U114 U115 G116 A117 C118 G119 U120 U121 U122 G123 G124 G125 U126 C127 C128 U129 G130 C131 G132 C133 A134 A135 U136 G137 G138 G139 A140 A141 U142 U143 C144 A145 U146 G147 A148 A149 C150 C151 A152 U153 G154 U155 C156 A157 G158 G159 U160 C161 C162 G163 G164 A165 A166 G167 G168 A169 A170 G171 C172 A173 G174 C175 A176 U177 U178 A179 A180 G181 U182 G183 A184 A185 A186 C187 C188 U189 C190 U191 C192 A193 U194 G195 U196 G197 C198 C199 G200 C201 A202 G203 G204 G205 U206 U207 G208 C209 C210 U211 G212 G213 G214 C215 C216 G217 A218 G219 C220 U221 A222 A223 C224 U225 G226 C227 U228 U229 A230 A231 G232 U233 A234 A235 C236 G237 C238 U239 A240 G241 G242 G243 U244 A245 G246 C247 G248 A249 A250 U251 C252 G253 A254 C255 A256 G257 A258 A259 G260 G261 U262 G263 C264 A265 C266 G267 G268 U269

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany