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Title | HIGH RESOLUTION STRUCTURE OF A MIRROR-IMAGE RNA OLIGONUCLEOT APTAMER IN COMPLEX WITH THE CHEMOKINE CCL2 | |
Keywords | APTAMER SPIEGELMER L-OLIGONUCLEOTIDE, CYTOKINE-RNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4R8I | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | C-C MOTIF CHEMOKINE 2 | A | 68 | 544 | 0 |
2 | Other macromolecule | MIRROR-IMAGE RNA OLIGONUCLEOTIDE APTAMER NOXE36 | B | 40 | 0 | 853 |
3 | Ligand | MIRROR-IMAGE RNA OLIGONUCLEOTIDE APTAMER NOXE36 | B | 7 | 0 | 7 |
4 | Water | 111 | 0 | 111 | ||
total | 226 | 544 | 971 |
Unit 1 | ASP3 ALA4 ILE5 ASN6 ALA7 PRO8 VAL9 THR10 CYS11 CYS12 TYR13 ASN14 PHE15 THR16 ASN17 ARG18 LYS19 ILE20 SER21 VAL22 GLN23 ARG24 LEU25 ALA26 SER27 TYR28 ARG29 ARG30 ILE31 THR32 SER33 SER34 LYS35 CYS36 PRO37 LYS38 GLU39 ALA40 VAL41 ILE42 PHE43 LYS44 THR45 ILE46 VAL47 ALA48 LYS49 GLU50 ILE51 CYS52 ALA53 ASP54 PRO55 LYS56 GLN57 LYS58 TRP59 VAL60 GLN61 ASP62 SER63 MET64 ASP65 HIS66 LEU67 ASP68 LYS69 GLN70 |
Unit 2 | 0G1 0C2 0A3 0C4 0G5 0U6 0C7 0C8 0C9 0U10 0C11 0A12 0C13 0C14 0G15 0G16 0U17 0G18 0C19 0A20 0A21 0G22 0U23 0G24 0A25 0A26 0G27 0C28 0C29 0G30 0U131 0G32 0G33 0C34 0U35 0C36 0U37 0G38 0C39 0G40 |
Unit 3 | NA101 SR102 K103 K104 K105 K106 K107 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |