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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A G-RICH RNA SEQUENCE BINDING FACTOR 1 FROM HOMO SAPIENS AT 2.50 A RESOLUTION
Keywords CANONICAL RNA BINDING DOMAIN, RRM_6, PF14259, STRUCTURAL GEN JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTU INITIATIVE, PSI-BIOLOGY, RNA-BINDING PROTEIN, RNA BINDING P RNA COMPLEX, PARTNERSHIP FOR T-CELL BIOLOGY, TCELL
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4QU7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   G-RICH SEQUENCE FACTOR 1  A 81 649 0
2  Protein   G-RICH SEQUENCE FACTOR 1  B 79 631 0
3  Protein   G-RICH SEQUENCE FACTOR 1  C 79 631 0
4  Protein   G-RICH SEQUENCE FACTOR 1  D 77 619 0
5  RNA    U 3 69 0
6  RNA    V 4 91 0
7  RNA    X 3 69 0
8 Water     182 0 182
total       508 2759 182

Proteins
Unit 1 MET400 HIS401 PHE402 VAL403 HIS404 MET405 ARG406 GLY407 LEU408 PRO409 PHE410 GLN411 ALA412 ASN413 ALA414 GLN415 ASP416 ILE417 ILE418 ASN419 PHE420 PHE421 ALA422 PRO423 LEU424 LYS425 PRO426 VAL427 ARG428 ILE429 THR430 MET431 GLU432 TYR433 SER434 SER435 SER436 GLY437 LYS438 ALA439 THR440 GLY441 GLU442 ALA443 ASP444 VAL445 HIS446 PHE447 GLU448 THR449 HIS450 GLU451 ASP452 ALA453 VAL454 ALA455 ALA456 MET457 LEU458 LYS459 ASP460 ARG461 SER462 HIS463 VAL464 HIS465 HIS466 ARG467 TYR468 ILE469 GLU470 LEU471 PHE472 LEU473 ASN474 SER475 CYS476 PRO477 LYS478 GLY479 LYS480
Unit 2 MET400 HIS401 PHE402 VAL403 HIS404 MET405 ARG406 GLY407 LEU408 PRO409 PHE410 GLN411 ALA412 ASN413 ALA414 GLN415 ASP416 ILE417 ILE418 ASN419 PHE420 PHE421 ALA422 PRO423 LEU424 LYS425 PRO426 VAL427 ARG428 ILE429 THR430 MET431 GLU432 TYR433 SER434 SER435 SER436 GLY437 LYS438 ALA439 THR440 GLY441 GLU442 ALA443 ASP444 VAL445 HIS446 PHE447 GLU448 THR449 HIS450 GLU451 ASP452 ALA453 VAL454 ALA455 ALA456 MET457 LEU458 LYS459 ASP460 ARG461 SER462 HIS463 VAL464 HIS465 HIS466 ARG467 TYR468 ILE469 GLU470 LEU471 PHE472 LEU473 ASN474 SER475 CYS476 PRO477 LYS478
Unit 3 MET400 HIS401 PHE402 VAL403 HIS404 MET405 ARG406 GLY407 LEU408 PRO409 PHE410 GLN411 ALA412 ASN413 ALA414 GLN415 ASP416 ILE417 ILE418 ASN419 PHE420 PHE421 ALA422 PRO423 LEU424 LYS425 PRO426 VAL427 ARG428 ILE429 THR430 MET431 GLU432 TYR433 SER434 SER435 SER436 GLY437 LYS438 ALA439 THR440 GLY441 GLU442 ALA443 ASP444 VAL445 HIS446 PHE447 GLU448 THR449 HIS450 GLU451 ASP452 ALA453 VAL454 ALA455 ALA456 MET457 LEU458 LYS459 ASP460 ARG461 SER462 HIS463 VAL464 HIS465 HIS466 ARG467 TYR468 ILE469 GLU470 LEU471 PHE472 LEU473 ASN474 SER475 CYS476 PRO477 LYS478
Unit 4 MET400 HIS401 PHE402 VAL403 HIS404 MET405 ARG406 GLY407 LEU408 PRO409 PHE410 GLN411 ALA412 ASN413 ALA414 GLN415 ASP416 ILE417 ILE418 ASN419 PHE420 PHE421 ALA422 PRO423 LEU424 LYS425 PRO426 VAL427 ARG428 ILE429 THR430 MET431 GLU432 TYR433 SER434 SER435 SER436 GLY437 LYS438 ALA439 THR440 GLY441 GLU442 ALA443 ASP444 VAL445 HIS446 PHE447 GLU448 THR449 HIS450 GLU451 ASP452 ALA453 VAL454 ALA455 ALA456 MET457 LEU458 LYS459 ASP460 ARG461 SER462 HIS463 VAL464 HIS465 HIS466 ARG467 TYR468 ILE469 GLU470 LEU471 PHE472 LEU473 ASN474 SER475 CYS476

Nucleic acids
Unit 5 G802 G803 G804
Unit 6 G802 G803 G804 A805
Unit 7 G802 G803 G804

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany