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| Title | CRYSTAL STRUCTURES OF THE BACTERIAL RIBOSOMAL DECODING SITE WITH AMIKACIN | |
| Keywords | AMINOGLYCOSIDE, HABA GROUP, RIBOSOMAL DECODING SITE, X-RAY A RNA, AMIKACIN, RNA-ANTIBIOTIC COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 4P20 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 21 | 449 | 0 | |
| 2 | RNA | B | 21 | 449 | 0 | |
| 3 | Ligand | 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*U *GP*UP*CP*GP*C)-3' | A | 1 | 0 | 40 |
| 4 | Ligand | 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*U *GP*UP*CP*GP*C)-3' | B | 1 | 0 | 40 |
| 5 | Water | 75 | 0 | 75 | ||
| total | 119 | 898 | 155 |
| Unit 1 | G2 C3 G4 U5 C6 A7 C8 A9 C10 C11 G12 G13 U14 G15 A16 A17 G18 U19 C20 G21 C22 |
| Unit 2 | G24 C25 G26 U27 C28 A29 C30 A31 C32 C33 G34 G35 U36 G37 A38 A39 G40 U41 C42 G43 C44 |
| Unit 3 | AKN101 |
| Unit 4 | AKN101 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |