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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PHI29 PRNA 3WJ CORE
Keywords PHI29 DNA PACKAGING MOTOR PRNA CORE ELEMENT, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4KZ2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 18 382 0
2  RNA    B 20 411 0
3  RNA    C 16 341 0
4  Ligand   PHI29 PRNA 3WJ CORE RNA 18 MER  A 1 0 1
5  Ligand   PHI29 PRNA 3WJ CORE RNA 20 MER  B 1 0 1
6  Ligand   PHI29 PRNA 3WJ CORE RNA 16 MER  C 1 0 1
7 Water     2 0 2
total       59 1134 5

Nucleic acids
Unit 1 U1 U2 G3 C4 C5 A6 U7 G8 U9 G10 U11 A12 U13 G14 U15 G16 G17 G18
Unit 2 C1 C2 C3 A4 C5 A6 U7 A8 C9 U10 U11 U12 G13 U14 U15 G16 A17 U18 C19 C20
Unit 3 G1 G2 A3 U4 C5 A6 A7 U8 C9 A10 U11 G12 G13 C14 A15 A16

Ligands
Unit 4 MN101
Unit 5 MN101
Unit 6 MN101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany