Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PFEBA-175 F1 IN COMPLEX WITH R218 ANTIB FRAGMENT
Keywords DBL DOMAIN, IMMUNOGLOBULIN DOMAIN, ANTIBODY FRAGMENT, CELL ATTACHMENT, IMMUNITY, RECEPTOR, LIGAND, EXTRACELLULAR, IMMU
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4K2U     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ERYTHROCYTE BINDING ANTIGEN 175  A 230 3869 0
2  Protein   ERYTHROCYTE BINDING ANTIGEN 175  B 257 4313 0
3  Protein   ANTIBODY HEAVY CHAIN  H 208 3143 0
4  Protein   ANTIBODY HEAVY CHAIN  I 214 3235 0
5  Protein   ANTIBODY LIGHT CHAIN  L 208 3146 0
6  Protein   ANTIBODY LIGHT CHAIN  M 200 3038 0
7  Ligand   ERYTHROCYTE BINDING ANTIGEN 175  A 2 0 10
8  Ligand   ERYTHROCYTE BINDING ANTIGEN 175  B 1 0 5
9  Ligand   ANTIBODY HEAVY CHAIN  H 3 0 15
10  Ligand   ANTIBODY HEAVY CHAIN  I 3 0 15
11  Ligand   ANTIBODY LIGHT CHAIN  L 2 0 10
12  Ligand   ANTIBODY LIGHT CHAIN  M 1 0 5
13 Water     171 0 171
total       1500 20744 231
Proteins
Unit 1 VAL10 LEU11 SER12 ASN13 CYS14 ARG15 GLU16 LYS17 ARG18 LYS19 GLY20 MET21 LYS22 TRP23 ASP24 CYS25 LYS26 LYS27 LYS28 ASN29 ASP30 ASN33 TYR34 VAL35 CYS36 ILE37 PRO38 ASP39 ARG40 ARG41 ILE42 GLN43 LEU44 CYS45 ILE46 VAL47 ASN48 LEU49 SER50 ILE51 ILE52 LYS53 THR54 TYR55 THR56 LYS57 GLU58 THR59 MET60 LYS61 ASP62 HIS63 PHE64 ILE65 GLU66 ALA67 SER68 LYS69 LYS70 GLU71 SER72 GLN73 LEU74 LEU75 LEU76 LYS77 LYS78 ASN79 ASP80 ASN81 LYS82 TYR83 ASN84 SER85 LYS86 PHE87 CYS88 ASN89 ASP90 LEU91 LYS92 ASN93 SER94 PHE95 LEU96 ASP97 TYR98 GLY99 HIS100 LEU101 ALA102 MET103 GLY104 ASN105 ASP106 MET107 ASP108 PHE109 GLY110 GLY111 TYR112 SER113 THR114 LYS115 ALA116 GLU117 ASN118 LYS119 ILE120 GLN121 GLU122 VAL123 PHE124 LYS125 GLY126 ALA127 HIS128 HIS134 LYS135 ILE136 LYS137 ASN138 PHE139 ARG140 LYS141 LYS142 TRP143 TRP144 ASN145 GLU146 PHE147 ARG148 GLU149 LYS150 LEU151 TRP152 GLU153 ALA154 MET155 LEU156 SER157 GLU158 HIS159 LYS160 ASN161 ASN162 ILE163 ASN164 ASN165 CYS166 LYS167 ASN168 ILE169 PRO170 GLN171 GLU172 GLU173 LEU174 GLN175 ILE176 THR177 GLN178 TRP179 ILE180 LYS181 GLU182 TRP183 HIS184 GLY185 GLU186 PHE187 LEU188 LEU189 GLU190 ARG191 ASP192 ASN193 ARG194 SER195 LYS196 LEU197 LYS213 GLU214 CYS215 ILE216 ASP217 PRO218 CYS219 MET220 LYS221 TYR222 ARG223 ASP224 TRP225 ILE226 ILE227 ARG228 SER229 LYS230 PHE231 GLU232 TRP233 HIS234 THR235 LEU236 SER237 LYS238 GLU239 TYR240 GLU241 THR242 GLN243 LYS244 LYS265 VAL266 SER267 LEU268 LEU269 LEU270 ASN271 ASN272 CYS273 ASP274 ALA275 GLU276 TYR277 SER278 LYS279 TYR280 CYS281
Unit 2 GLU9 VAL10 LEU11 SER12 ASN13 CYS14 ARG15 GLU16 LYS17 ARG18 LYS19 GLY20 MET21 LYS22 TRP23 ASP24 CYS25 LYS26 LYS27 LYS28 ASN33 TYR34 VAL35 CYS36 ILE37 PRO38 ASP39 ARG40 ARG41 ILE42 GLN43 LEU44 CYS45 ILE46 VAL47 ASN48 LEU49 SER50 ILE51 ILE52 LYS53 THR54 TYR55 THR56 LYS57 GLU58 THR59 MET60 LYS61 ASP62 HIS63 PHE64 ILE65 GLU66 ALA67 SER68 LYS69 LYS70 GLU71 SER72 GLN73 LEU74 LEU75 LEU76 LYS77 LYS78 ASN79 ASP80 ASN81 LYS82 TYR83 ASN84 SER85 LYS86 PHE87 CYS88 ASN89 ASP90 LEU91 LYS92 ASN93 SER94 PHE95 LEU96 ASP97 TYR98 GLY99 HIS100 LEU101 ALA102 MET103 GLY104 ASN105 ASP106 MET107 ASP108 PHE109 GLY110 TYR112 SER113 THR114 LYS115 ALA116 GLU117 ASN118 LYS119 ILE120 GLN121 GLU122 VAL123 PHE124 LYS125 ILE131 SER132 GLU133 HIS134 LYS135 ILE136 LYS137 ASN138 PHE139 ARG140 LYS141 LYS142 TRP143 TRP144 ASN145 GLU146 PHE147 ARG148 GLU149 LYS150 LEU151 TRP152 GLU153 ALA154 MET155 LEU156 SER157 GLU158 HIS159 LYS160 ASN161 ASN162 ILE163 ASN164 ASN165 CYS166 LYS167 ASN168 ILE169 PRO170 GLN171 GLU172 GLU173 LEU174 GLN175 ILE176 THR177 GLN178 TRP179 ILE180 LYS181 GLU182 TRP183 HIS184 GLY185 GLU186 PHE187 LEU188 LEU189 GLU190 ARG191 ASP192 ASN193 ARG194 SER195 LYS196 LEU197 PRO198 LYS199 SER200 LYS201 CYS202 LYS203 LEU207 TYR208 GLU209 ALA210 CYS211 GLU212 LYS213 CYS215 ILE216 ASP217 PRO218 CYS219 MET220 LYS221 TYR222 ARG223 ASP224 TRP225 ILE226 ILE227 ARG228 SER229 LYS230 PHE231 GLU232 TRP233 HIS234 THR235 LEU236 SER237 LYS238 GLU239 TYR240 GLU241 THR242 GLN243 LYS244 VAL245 PRO246 LYS247 GLU248 ASN249 ALA250 GLU251 ASN252 TYR253 LEU254 ILE255 LYS256 ILE257 SER258 ASP263 ALA264 LYS265 VAL266 SER267 LEU268 LEU269 LEU270 ASN271 ASN272 CYS273 ASP274 ALA275 GLU276 TYR277 SER278 LYS279 TYR280 CYS281 ASP282 CYS283
Unit 3 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 THR23 ALA24 SER25 GLY26 PHE27 ASN28 ILE29 LYS30 ASP31 ASN32 TYR33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO52A ALA53 ASN54 GLY55 ASN56 THR57 LYS58 TYR59 ASP60 PRO61 LYS62 PHE63 GLN64 GLY65 LYS66 ALA67 THR68 ILE69 THR70 ALA71 ASP72 THR73 SER74 SER75 ASN76 THR77 ALA78 TYR79 LEU80 GLN81 LEU82 SER82A SER82B LEU82C THR83 SER84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 HIS95 TYR96 ASP97 GLY98 TYR99 PHE100 LEU100A TYR100B TYR100C PHE100D GLU101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 THR108 LEU109 THR110 VAL111 SER112 SER113 ALA114 LYS115 THR116 THR117 PRO118 PRO119 SER120 VAL121 TYR122 PRO123 LEU124 ALA125 PRO126 VAL136 THR137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 GLY144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 THR153 TRP154 ASN155 SER156 GLY157 SER158 LEU159 SER160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 ASP173 LEU174 TYR175 THR176 LEU177 SER178 SER179 SER180 VAL181 THR182 VAL183 PRO184 SER185 SER186 THR187 TRP188 PRO189 SER190 GLU191 THR192 VAL193 THR194 CYS195 ASN196 VAL197 ALA198 HIS199 PRO200 ALA201 SER202 SER203 THR204 LYS205 VAL206 ASP207 LYS208 LYS209 ILE210 VAL211 PRO212
Unit 4 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 THR23 ALA24 SER25 GLY26 PHE27 ASN28 ILE29 LYS30 ASP31 ASN32 TYR33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLU42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO52A ALA53 ASN54 GLY55 ASN56 THR57 LYS58 TYR59 ASP60 PRO61 LYS62 PHE63 GLN64 GLY65 LYS66 ALA67 THR68 ILE69 THR70 ALA71 ASP72 THR73 SER74 SER75 ASN76 THR77 ALA78 TYR79 LEU80 GLN81 LEU82 SER82A SER82B LEU82C THR83 SER84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 HIS95 TYR96 ASP97 GLY98 TYR99 PHE100 LEU100A TYR100B TYR100C PHE100D GLU101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 THR108 LEU109 THR110 VAL111 SER112 SER113 ALA114 LYS115 THR116 THR117 PRO118 PRO119 SER120 VAL121 TYR122 PRO123 LEU124 ALA125 PRO126 SER134 MET135 VAL136 THR137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 GLY144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 THR153 TRP154 ASN155 SER156 GLY157 SER158 LEU159 SER160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 ASP173 LEU174 TYR175 THR176 LEU177 SER178 SER179 SER180 VAL181 THR182 VAL183 PRO184 SER185 SER186 THR187 TRP188 PRO189 SER190 GLU191 THR192 VAL193 THR194 CYS195 ASN196 VAL197 ALA198 HIS199 PRO200 ALA201 SER202 SER203 THR204 LYS205 VAL206 ASP207 LYS208 LYS209 ILE210 VAL211 PRO212 ARG213
Unit 5 ASP1 ILE2 GLN3 MET4 THR5 GLN6 THR7 THR8 SER9 SER10 LEU11 SER12 ALA13 SER14 LEU15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 ARG24 ALA25 GLY26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ASN34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 ASP41 GLY42 THR43 VAL44 LYS45 LEU46 LEU47 ILE48 TYR49 TYR50 THR51 SER52 ARG53 LEU54 HIS55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 TYR71 SER72 LEU73 THR74 ILE75 SER76 ASN77 LEU78 GLU79 GLN80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 PHE87 CYS88 GLN89 GLN90 GLY91 SER92 THR93 PHE94 PRO95 TRP96 THR97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLN124 LEU125 THR126 SER127 GLY128 GLY129 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ASP184 GLU185 TYR186 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 HIS198 LYS199 LYS200 GLY201 GLU202 PHE203 GLN204 HIS205 THR206 GLY207 GLY208 ARG209 TYR210
Unit 6 ASP1 ILE2 GLN3 MET4 THR5 GLN6 THR7 THR8 SER9 SER10 LEU11 SER12 ALA13 SER14 LEU15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 ARG24 ALA25 GLY26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ASN34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 ASP41 GLY42 THR43 VAL44 LYS45 LEU46 LEU47 ILE48 TYR49 TYR50 THR51 SER52 ARG53 LEU54 HIS55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 TYR71 SER72 LEU73 THR74 ILE75 SER76 ASN77 LEU78 GLU79 GLN80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 PHE87 CYS88 GLN89 GLN90 GLY91 SER92 THR93 PHE94 PRO95 TRP96 THR97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLN124 LEU125 THR126 SER127 GLY128 GLY129 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ASP184 GLU185 TYR186 GLU187 ARG188 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 HIS198 LYS199 LYS200
Ligands
Unit 7 SO4301 SO4302
Unit 8 SO4301
Unit 9 SO4301 SO4302 SO4303
Unit 10 SO4301 SO4302 SO4303
Unit 11 SO4301 SO4302
Unit 12 SO4301
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany