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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE SMALL TERMINASE OLIGOMERIZATION CORE DOMAIN FROM A SPP1-LIKE BACTERIOPHAGE (CRYSTAL FORM 3)
Keywords DNA-BINDING PROTEIN, MOLECULAR MOTOR, DNA PACKAGING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3ZQO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TERMINASE SMALL SUBUNIT  A 58 439 8
2  Protein   TERMINASE SMALL SUBUNIT  B 56 422 8
3  Protein   TERMINASE SMALL SUBUNIT  C 56 422 8
4  Protein   TERMINASE SMALL SUBUNIT  D 58 439 8
5  Protein   TERMINASE SMALL SUBUNIT  E 56 422 8
6  Protein   TERMINASE SMALL SUBUNIT  F 56 422 8
7  Protein   TERMINASE SMALL SUBUNIT  G 57 431 8
8  Protein   TERMINASE SMALL SUBUNIT  H 57 431 8
9  Protein   TERMINASE SMALL SUBUNIT  I 57 431 8
10  Protein   TERMINASE SMALL SUBUNIT  J 58 439 8
11  Protein   TERMINASE SMALL SUBUNIT  K 56 422 8
12  Protein   TERMINASE SMALL SUBUNIT  L 56 422 8
13  Protein   TERMINASE SMALL SUBUNIT  M 57 431 8
14  Protein   TERMINASE SMALL SUBUNIT  N 56 422 8
15  Protein   TERMINASE SMALL SUBUNIT  O 57 431 8
16  Protein   TERMINASE SMALL SUBUNIT  P 58 439 8
17  Protein   TERMINASE SMALL SUBUNIT  Q 58 439 8
18  Protein    R 56 422 8
19  Ligand    R 1 0 1
20  Ligand   TERMINASE SMALL SUBUNIT  K 1 0 1
21 Water     604 0 604
total       1629 7726 750

Proteins
Unit 1 ASN63 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 2 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 3 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 4 ASN63 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 5 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 6 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 7 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 8 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 9 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 10 ASN63 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 11 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 12 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 13 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 14 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 15 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 16 ASN63 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 17 ASN63 GLU64 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120
Unit 18 LYS65 LYS66 ILE67 LEU68 GLN69 ALA70 ASN71 GLU72 VAL73 LEU74 GLU75 HIS76 LEU77 THR78 ARG79 ILE80 ALA81 LEU82 GLY83 GLN84 GLU85 LYS86 GLU87 GLN88 VAL89 LEU90 MSE91 GLY92 ILE93 GLY94 LYS95 GLY96 ALA97 GLU98 THR99 LYS100 THR101 HIS102 VAL103 GLU104 VAL105 SER106 ALA107 LYS108 ASP109 ARG110 ILE111 LYS112 ALA113 LEU114 GLU115 LEU116 LEU117 GLY118 LYS119 ALA120

Ligands
Unit 19 K1121
Unit 20 K1121

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany