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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE PERIPLASMIC DOMAIN OF DOTI (CRYSTAL FORM I)
Keywords TYPE IVB SECRETION, UNKNOWN FUNCTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3WZ4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DOTI  A 137 1037 24
2  Protein   DOTI  B 137 1037 24
3  Protein   DOTI  C 139 1047 24
4  Protein   DOTI  D 136 1027 24
5  Protein   DOTI  E 139 1047 24
6  Protein   DOTI  F 136 1027 24
7  Protein   DOTI  G 140 1053 24
8  Protein   DOTI  H 139 1047 24
9  Ligand   DOTI  A 4 0 32
10  Ligand   DOTI  B 4 0 32
11  Ligand   DOTI  C 4 0 32
12  Ligand   DOTI  D 4 0 32
13  Ligand   DOTI  E 4 0 32
14  Ligand   DOTI  F 4 0 32
15  Ligand   DOTI  G 4 0 32
16  Ligand   DOTI  H 4 0 32
17 Water     1256 0 1256
total       2391 8322 1704

Proteins
Unit 1 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 2 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 3 GLY69 SER70 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 4 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 5 GLY69 SER70 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 6 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207
Unit 7 GLY69 SER70 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207 SER208
Unit 8 GLY69 SER70 HIS71 MSE72 GLN73 SER74 ASP75 SER76 ALA77 VAL78 LEU79 GLN80 TRP81 ALA82 ASN83 GLN84 ALA85 ALA86 ILE87 ALA88 ALA89 PHE90 THR91 TYR92 ASN93 PHE94 VAL95 ASN96 TYR97 ARG98 ASP99 GLU100 LEU101 GLN102 ALA103 SER104 SER105 GLY106 PHE107 PHE108 THR109 ALA110 GLU111 GLY112 TRP113 ASP114 GLN115 PHE116 LEU117 GLY118 ALA119 LEU120 GLU121 GLN122 SER123 ASN124 ASN125 LEU126 ASP127 ALA128 VAL129 LYS130 ALA131 LYS132 LYS133 LEU134 VAL135 VAL136 SER137 ALA138 VAL139 ALA140 THR141 ARG142 ALA143 PRO144 ILE145 ILE146 LEU147 GLN148 LYS149 GLY150 VAL151 LEU152 ASN153 GLY154 ARG155 TYR156 SER157 TRP158 ARG159 VAL160 GLN161 MSE162 PRO163 ILE164 LEU165 VAL166 THR167 TYR168 GLN169 SER170 ALA171 SER172 GLU173 PHE174 THR175 GLN176 GLN177 ASN178 ASN179 VAL180 VAL181 THR182 MSE183 LEU184 ILE185 THR186 ARG187 VAL188 SER189 THR190 LEU191 ASN192 SER193 PRO194 ARG195 GLY196 ILE197 GLY198 ILE199 SER200 GLN201 PHE202 VAL203 VAL204 GLY205 PRO206 ALA207

Ligands
Unit 9 MRD501 MRD502 MPD503 MPD504
Unit 10 MRD501 MRD502 MPD503 MPD504
Unit 11 MRD501 MRD502 MPD503 MPD504
Unit 12 MRD501 MRD502 MPD503 MPD504
Unit 13 MRD501 MRD502 MPD503 MPD504
Unit 14 MRD501 MRD502 MPD503 MPD504
Unit 15 MRD501 MRD502 MPD503 MPD504
Unit 16 MRD501 MRD502 MPD503 MPD504

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany