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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CARBOHYDRATE RECOGNITION DOMAIN OF BLOO DENDRITIC CELL ANTIGEN-2 (BDCA2) LECTIN (CRYSTAL FORM-3)
Keywords C-TYPE LECTIN FOLD, IMMUNE RECEPTOR, COMPLEX-TYPE N-GLYCAN, CARBOHYDRATE BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3WBR     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  A 128 1051 0
2  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  B 128 1051 0
3  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  C 127 1042 0
4  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  D 126 1036 0
5  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  E 125 1024 0
6  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  F 127 1042 0
7  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  G 127 1042 0
8  Protein   C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER C  H 126 1033 0
9 Water     89 0 89
total       1103 8321 89

Proteins
Unit 1 SER82 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 GLU189 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209 LYS210
Unit 2 SER82 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 GLU189 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209 LYS210
Unit 3 SER82 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209 LYS210
Unit 4 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209 LYS210
Unit 5 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 SER188 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208
Unit 6 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 SER188 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209 LYS210
Unit 7 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 SER188 GLU189 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209
Unit 8 CYS83 PRO84 THR85 PRO86 TRP87 THR88 SER89 PHE90 GLN91 SER92 SER93 CYS94 TYR95 PHE96 ILE97 SER98 THR99 GLY100 MET101 GLN102 SER103 TRP104 THR105 LYS106 SER107 GLN108 LYS109 ASN110 CYS111 SER112 VAL113 MET114 GLY115 ALA116 ASP117 LEU118 VAL119 VAL120 ILE121 ASN122 THR123 ARG124 GLU125 GLU126 GLN127 ASP128 PHE129 ILE130 ILE131 GLN132 ASN133 LEU134 LYS135 ARG136 ASN137 SER138 SER139 TYR140 PHE141 LEU142 GLY143 LEU144 SER145 ASP146 PRO147 GLY148 GLY149 ARG150 ARG151 HIS152 TRP153 GLN154 TRP155 VAL156 ASP157 GLN158 THR159 PRO160 TYR161 ASN162 GLU163 ASN164 VAL165 THR166 PHE167 TRP168 HIS169 SER170 GLY171 GLU172 PRO173 ASN174 ASN175 LEU176 ASP177 GLU178 ARG179 CYS180 ALA181 ILE182 ILE183 ASN184 PHE185 ARG186 SER187 SER188 GLU190 TRP191 GLY192 TRP193 ASN194 ASP195 ILE196 HIS197 CYS198 HIS199 VAL200 PRO201 GLN202 LYS203 SER204 ILE205 CYS206 LYS207 MET208 LYS209

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany