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Sequence, Chains, Asymmetric and Biological Units

Title L-LACTATE DEHYDROGENASE FROM THERMUS CALDOPHILUS GK24 COMPLE OXAMATE, NADH AND FBP
Keywords ROSSMANN FOLD, DEHYDROGENASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3VPH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE  A 310 2314 0
2  Protein   L-LACTATE DEHYDROGENASE  B 310 2314 0
3  Protein   L-LACTATE DEHYDROGENASE  C 310 2314 0
4  Protein   L-LACTATE DEHYDROGENASE  D 310 2314 0
5  Ligand   L-LACTATE DEHYDROGENASE  A 4 0 76
6  Ligand   L-LACTATE DEHYDROGENASE  B 4 0 76
7  Ligand   L-LACTATE DEHYDROGENASE  C 2 0 12
8  Ligand   L-LACTATE DEHYDROGENASE  D 3 0 56
9 Water     448 0 448
total       1701 9256 668
Proteins
Unit 1 MET21 LYS22 VAL23 GLY24 ILE25 VAL26 GLY27 SER28 GLY29 MET30 VAL31 GLY32 SER33 ALA34 THR35 ALA36 TYR37 ALA38 LEU39 ALA40 LEU41 LEU42 GLY43 VAL44 ALA45 ARG46 GLU47 VAL48 VAL49 LEU50 VAL51 ASP52 LEU53 ASP54 ARG55 LYS56 LEU57 ALA58 GLN59 ALA60 HIS61 ALA62 GLU63 ASP64 ILE65 LEU66 HIS67 ALA68 THR69 PRO70 PHE71 ALA72 HIS73 PRO75 VAL76 TRP77 VAL78 ARG79 ALA80 GLY81 SER82 TYR83 GLY84 ASP85 LEU86 GLU87 GLY88 ALA89 ARG90 ALA91 VAL92 VAL93 LEU94 ALA95 ALA96 GLY97 VAL98 ALA99 GLN100 ARG101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 GLN108 LEU109 LEU110 ASP111 ARG112 ASN113 ALA114 GLN115 VAL116 PHE117 ALA118 GLN119 VAL120 VAL121 PRO122 ARG123 VAL124 LEU125 GLU126 ALA127 ALA128 PRO129 GLU130 ALA131 VAL132 LEU133 LEU134 VAL135 ALA136 THR137 ASN138 PRO139 VAL140 ASP141 VAL142 MET143 THR144 GLN145 VAL146 ALA147 TYR148 ARG149 LEU150 SER151 ALA152 LEU153 PRO154 PRO155 GLY156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 ILE164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 ALA172 LEU173 LEU174 ALA175 GLU176 HIS177 LEU178 ARG179 VAL180 ALA181 PRO182 GLN183 SER184 VAL185 HIS186 ALA187 TYR188 VAL189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 GLU197 VAL198 LEU199 VAL200 TRP201 SER202 SER203 ALA204 GLN205 VAL206 GLY207 GLY208 VAL209 PRO210 LEU211 LEU212 GLU213 PHE214 ALA215 GLU216 ALA217 ARG218 GLY219 ARG220A ALA220B LEU221 SER222 PRO223 GLU224 ASP225 ARG226 ALA227 ARG228 ILE229 ASP230 GLU231 GLY232 VAL233 ARG234 ARG235 ALA236 ALA237 TYR238 ARG239 ILE240 ILE241 GLU242 GLY243 LYS244 GLY245 ALA246 THR247 TYR248 TYR249 GLY250 ILE251 GLY252 ALA253 GLY254 LEU255 ALA256 ARG257 LEU258 VAL259 ARG260 ALA261 ILE262 LEU263 THR264 ASP265 GLU266 LYS267 GLY268 VAL269 TYR270 THR271 VAL272 SER273 ALA274 PHE275 THR276 PRO277 GLU278 VAL279 GLU280 GLY281 VAL282 LEU283 GLU284 VAL285 SER286 LEU287 SER288 LEU289 PRO290 ARG291 ILE292 LEU293 GLY294 ALA295 GLY296 GLY297 VAL298 GLU299 GLY300 THR301 VAL302 TYR303 PRO304 SER305 LEU306 SER307 PRO308 GLU309 GLU310 ARG311 GLU312 ALA313 LEU314 ARG315 ARG316 SER317 ALA318 GLU319 ILE320 LEU321 LYS322 GLU323 ALA324 ALA325 PHE326 ALA327 LEU328 GLY329 PHE330
Unit 2 MET21 LYS22 VAL23 GLY24 ILE25 VAL26 GLY27 SER28 GLY29 MET30 VAL31 GLY32 SER33 ALA34 THR35 ALA36 TYR37 ALA38 LEU39 ALA40 LEU41 LEU42 GLY43 VAL44 ALA45 ARG46 GLU47 VAL48 VAL49 LEU50 VAL51 ASP52 LEU53 ASP54 ARG55 LYS56 LEU57 ALA58 GLN59 ALA60 HIS61 ALA62 GLU63 ASP64 ILE65 LEU66 HIS67 ALA68 THR69 PRO70 PHE71 ALA72 HIS73 PRO75 VAL76 TRP77 VAL78 ARG79 ALA80 GLY81 SER82 TYR83 GLY84 ASP85 LEU86 GLU87 GLY88 ALA89 ARG90 ALA91 VAL92 VAL93 LEU94 ALA95 ALA96 GLY97 VAL98 ALA99 GLN100 ARG101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 GLN108 LEU109 LEU110 ASP111 ARG112 ASN113 ALA114 GLN115 VAL116 PHE117 ALA118 GLN119 VAL120 VAL121 PRO122 ARG123 VAL124 LEU125 GLU126 ALA127 ALA128 PRO129 GLU130 ALA131 VAL132 LEU133 LEU134 VAL135 ALA136 THR137 ASN138 PRO139 VAL140 ASP141 VAL142 MET143 THR144 GLN145 VAL146 ALA147 TYR148 ARG149 LEU150 SER151 ALA152 LEU153 PRO154 PRO155 GLY156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 ILE164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 ALA172 LEU173 LEU174 ALA175 GLU176 HIS177 LEU178 ARG179 VAL180 ALA181 PRO182 GLN183 SER184 VAL185 HIS186 ALA187 TYR188 VAL189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 GLU197 VAL198 LEU199 VAL200 TRP201 SER202 SER203 ALA204 GLN205 VAL206 GLY207 GLY208 VAL209 PRO210 LEU211 LEU212 GLU213 PHE214 ALA215 GLU216 ALA217 ARG218 GLY219 ARG220A ALA220B LEU221 SER222 PRO223 GLU224 ASP225 ARG226 ALA227 ARG228 ILE229 ASP230 GLU231 GLY232 VAL233 ARG234 ARG235 ALA236 ALA237 TYR238 ARG239 ILE240 ILE241 GLU242 GLY243 LYS244 GLY245 ALA246 THR247 TYR248 TYR249 GLY250 ILE251 GLY252 ALA253 GLY254 LEU255 ALA256 ARG257 LEU258 VAL259 ARG260 ALA261 ILE262 LEU263 THR264 ASP265 GLU266 LYS267 GLY268 VAL269 TYR270 THR271 VAL272 SER273 ALA274 PHE275 THR276 PRO277 GLU278 VAL279 GLU280 GLY281 VAL282 LEU283 GLU284 VAL285 SER286 LEU287 SER288 LEU289 PRO290 ARG291 ILE292 LEU293 GLY294 ALA295 GLY296 GLY297 VAL298 GLU299 GLY300 THR301 VAL302 TYR303 PRO304 SER305 LEU306 SER307 PRO308 GLU309 GLU310 ARG311 GLU312 ALA313 LEU314 ARG315 ARG316 SER317 ALA318 GLU319 ILE320 LEU321 LYS322 GLU323 ALA324 ALA325 PHE326 ALA327 LEU328 GLY329 PHE330
Unit 3 MET21 LYS22 VAL23 GLY24 ILE25 VAL26 GLY27 SER28 GLY29 MET30 VAL31 GLY32 SER33 ALA34 THR35 ALA36 TYR37 ALA38 LEU39 ALA40 LEU41 LEU42 GLY43 VAL44 ALA45 ARG46 GLU47 VAL48 VAL49 LEU50 VAL51 ASP52 LEU53 ASP54 ARG55 LYS56 LEU57 ALA58 GLN59 ALA60 HIS61 ALA62 GLU63 ASP64 ILE65 LEU66 HIS67 ALA68 THR69 PRO70 PHE71 ALA72 HIS73 PRO75 VAL76 TRP77 VAL78 ARG79 ALA80 GLY81 SER82 TYR83 GLY84 ASP85 LEU86 GLU87 GLY88 ALA89 ARG90 ALA91 VAL92 VAL93 LEU94 ALA95 ALA96 GLY97 VAL98 ALA99 GLN100 ARG101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 GLN108 LEU109 LEU110 ASP111 ARG112 ASN113 ALA114 GLN115 VAL116 PHE117 ALA118 GLN119 VAL120 VAL121 PRO122 ARG123 VAL124 LEU125 GLU126 ALA127 ALA128 PRO129 GLU130 ALA131 VAL132 LEU133 LEU134 VAL135 ALA136 THR137 ASN138 PRO139 VAL140 ASP141 VAL142 MET143 THR144 GLN145 VAL146 ALA147 TYR148 ARG149 LEU150 SER151 ALA152 LEU153 PRO154 PRO155 GLY156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 ILE164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 ALA172 LEU173 LEU174 ALA175 GLU176 HIS177 LEU178 ARG179 VAL180 ALA181 PRO182 GLN183 SER184 VAL185 HIS186 ALA187 TYR188 VAL189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 GLU197 VAL198 LEU199 VAL200 TRP201 SER202 SER203 ALA204 GLN205 VAL206 GLY207 GLY208 VAL209 PRO210 LEU211 LEU212 GLU213 PHE214 ALA215 GLU216 ALA217 ARG218 GLY219 ARG220A ALA220B LEU221 SER222 PRO223 GLU224 ASP225 ARG226 ALA227 ARG228 ILE229 ASP230 GLU231 GLY232 VAL233 ARG234 ARG235 ALA236 ALA237 TYR238 ARG239 ILE240 ILE241 GLU242 GLY243 LYS244 GLY245 ALA246 THR247 TYR248 TYR249 GLY250 ILE251 GLY252 ALA253 GLY254 LEU255 ALA256 ARG257 LEU258 VAL259 ARG260 ALA261 ILE262 LEU263 THR264 ASP265 GLU266 LYS267 GLY268 VAL269 TYR270 THR271 VAL272 SER273 ALA274 PHE275 THR276 PRO277 GLU278 VAL279 GLU280 GLY281 VAL282 LEU283 GLU284 VAL285 SER286 LEU287 SER288 LEU289 PRO290 ARG291 ILE292 LEU293 GLY294 ALA295 GLY296 GLY297 VAL298 GLU299 GLY300 THR301 VAL302 TYR303 PRO304 SER305 LEU306 SER307 PRO308 GLU309 GLU310 ARG311 GLU312 ALA313 LEU314 ARG315 ARG316 SER317 ALA318 GLU319 ILE320 LEU321 LYS322 GLU323 ALA324 ALA325 PHE326 ALA327 LEU328 GLY329 PHE330
Unit 4 MET21 LYS22 VAL23 GLY24 ILE25 VAL26 GLY27 SER28 GLY29 MET30 VAL31 GLY32 SER33 ALA34 THR35 ALA36 TYR37 ALA38 LEU39 ALA40 LEU41 LEU42 GLY43 VAL44 ALA45 ARG46 GLU47 VAL48 VAL49 LEU50 VAL51 ASP52 LEU53 ASP54 ARG55 LYS56 LEU57 ALA58 GLN59 ALA60 HIS61 ALA62 GLU63 ASP64 ILE65 LEU66 HIS67 ALA68 THR69 PRO70 PHE71 ALA72 HIS73 PRO75 VAL76 TRP77 VAL78 ARG79 ALA80 GLY81 SER82 TYR83 GLY84 ASP85 LEU86 GLU87 GLY88 ALA89 ARG90 ALA91 VAL92 VAL93 LEU94 ALA95 ALA96 GLY97 VAL98 ALA99 GLN100 ARG101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 GLN108 LEU109 LEU110 ASP111 ARG112 ASN113 ALA114 GLN115 VAL116 PHE117 ALA118 GLN119 VAL120 VAL121 PRO122 ARG123 VAL124 LEU125 GLU126 ALA127 ALA128 PRO129 GLU130 ALA131 VAL132 LEU133 LEU134 VAL135 ALA136 THR137 ASN138 PRO139 VAL140 ASP141 VAL142 MET143 THR144 GLN145 VAL146 ALA147 TYR148 ARG149 LEU150 SER151 ALA152 LEU153 PRO154 PRO155 GLY156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 ILE164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 ALA172 LEU173 LEU174 ALA175 GLU176 HIS177 LEU178 ARG179 VAL180 ALA181 PRO182 GLN183 SER184 VAL185 HIS186 ALA187 TYR188 VAL189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 GLU197 VAL198 LEU199 VAL200 TRP201 SER202 SER203 ALA204 GLN205 VAL206 GLY207 GLY208 VAL209 PRO210 LEU211 LEU212 GLU213 PHE214 ALA215 GLU216 ALA217 ARG218 GLY219 ARG220A ALA220B LEU221 SER222 PRO223 GLU224 ASP225 ARG226 ALA227 ARG228 ILE229 ASP230 GLU231 GLY232 VAL233 ARG234 ARG235 ALA236 ALA237 TYR238 ARG239 ILE240 ILE241 GLU242 GLY243 LYS244 GLY245 ALA246 THR247 TYR248 TYR249 GLY250 ILE251 GLY252 ALA253 GLY254 LEU255 ALA256 ARG257 LEU258 VAL259 ARG260 ALA261 ILE262 LEU263 THR264 ASP265 GLU266 LYS267 GLY268 VAL269 TYR270 THR271 VAL272 SER273 ALA274 PHE275 THR276 PRO277 GLU278 VAL279 GLU280 GLY281 VAL282 LEU283 GLU284 VAL285 SER286 LEU287 SER288 LEU289 PRO290 ARG291 ILE292 LEU293 GLY294 ALA295 GLY296 GLY297 VAL298 GLU299 GLY300 THR301 VAL302 TYR303 PRO304 SER305 LEU306 SER307 PRO308 GLU309 GLU310 ARG311 GLU312 ALA313 LEU314 ARG315 ARG316 SER317 ALA318 GLU319 ILE320 LEU321 LYS322 GLU323 ALA324 ALA325 PHE326 ALA327 LEU328 GLY329 PHE330
Ligands
Unit 5 OXM401 FBP402 NAD403 GOL404
Unit 6 OXM401 FBP402 NAD403 GOL404
Unit 7 OXM401 GOL402
Unit 8 OXM401 NAD402 GOL403
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany