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| Title | STRUCTURAL CHARACTERIZATION OF GLUTAMIC ACID DECARBOXYLASE; INTO THE MECHANISM OF AUTOINACTIVATION | |
| Keywords | CATALYTIC LOOP SWAP, LYASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 3VP6 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | GLUTAMATE DECARBOXYLASE 1 | A | 500 | 3817 | 24 |
| 2 | Protein | GLUTAMATE DECARBOXYLASE 1 | B | 491 | 3749 | 23 |
| 3 | Ligand | GLUTAMATE DECARBOXYLASE 1 | A | 1 | 0 | 13 |
| 4 | Ligand | GLUTAMATE DECARBOXYLASE 1 | B | 3 | 0 | 25 |
| 5 | Water | 266 | 0 | 266 | ||
| total | 1261 | 7566 | 351 |
| Unit 1 | THR93 ASP94 PHE95 SER96 ASN97 LEU98 PHE99 ALA100 ARG101 ASP102 LEU103 LEU104 PRO105 ALA106 LYS107 ASN108 GLY109 GLU110 GLU111 GLN112 THR113 VAL114 GLN115 PHE116 LEU117 LEU118 GLU119 VAL120 VAL121 ASP122 ILE123 LEU124 LEU125 ASN126 TYR127 VAL128 ARG129 LYS130 THR131 PHE132 ASP133 ARG134 SER135 THR136 LYS137 VAL138 LEU139 ASP140 PHE141 HIS142 HIS143 PRO144 HIS145 GLN146 LEU147 LEU148 GLU149 GLY150 MET151 GLU152 GLY153 PHE154 ASN155 LEU156 GLU157 LEU158 SER159 ASP160 HIS161 PRO162 GLU163 SER164 LEU165 GLU166 GLN167 ILE168 LEU169 VAL170 ASP171 CYS172 ARG173 ASP174 THR175 LEU176 LYS177 TYR178 GLY179 VAL180 ARG181 THR182 GLY183 HIS184 PRO185 ARG186 PHE187 PHE188 ASN189 GLN190 LEU191 SER192 THR193 GLY194 LEU195 ASP196 ILE197 ILE198 GLY199 LEU200 ALA201 GLY202 GLU203 TRP204 LEU205 THR206 SER207 THR208 ALA209 ASN210 THR211 ASN212 MET213 PHE214 THR215 TYR216 GLU217 ILE218 ALA219 PRO220 VAL221 PHE222 VAL223 LEU224 MET225 GLU226 GLN227 ILE228 THR229 LEU230 LYS231 LYS232 MET233 ARG234 GLU235 ILE236 VAL237 GLY238 TRP239 SER240 SER241 LYS242 ASP243 GLY244 ASP245 GLY246 ILE247 PHE248 SER249 PRO250 GLY251 GLY252 ALA253 ILE254 SER255 ASN256 MET257 TYR258 SER259 ILE260 MET261 ALA262 ALA263 ARG264 TYR265 LYS266 TYR267 PHE268 PRO269 GLU270 VAL271 LYS272 THR273 LYS274 GLY275 MET276 ALA277 ALA278 VAL279 PRO280 LYS281 LEU282 VAL283 LEU284 PHE285 THR286 SER287 GLU288 GLN289 SER290 HIS291 TYR292 SER293 ILE294 LYS295 LYS296 ALA297 GLY298 ALA299 ALA300 LEU301 GLY302 PHE303 GLY304 THR305 ASP306 ASN307 VAL308 ILE309 LEU310 ILE311 LYS312 CYS313 ASN314 GLU315 ARG316 GLY317 LYS318 ILE319 ILE320 PRO321 ALA322 ASP323 PHE324 GLU325 ALA326 LYS327 ILE328 LEU329 GLU330 ALA331 LYS332 GLN333 LYS334 GLY335 TYR336 VAL337 PRO338 PHE339 TYR340 VAL341 ASN342 ALA343 THR344 ALA345 GLY346 THR347 THR348 VAL349 TYR350 GLY351 ALA352 PHE353 ASP354 PRO355 ILE356 GLN357 GLU358 ILE359 ALA360 ASP361 ILE362 CYS363 GLU364 LYS365 TYR366 ASN367 LEU368 TRP369 LEU370 HIS371 VAL372 ASP373 ALA374 ALA375 TRP376 GLY377 GLY378 GLY379 LEU380 LEU381 MET382 SER383 ARG384 LYS385 HIS386 ARG387 HIS388 LYS389 LEU390 ASN391 GLY392 ILE393 GLU394 ARG395 ALA396 ASN397 SER398 VAL399 THR400 TRP401 ASN402 PRO403 HIS404 LLP405 MET406 MET407 GLY408 VAL409 LEU410 LEU411 GLN412 CYS413 SER414 ALA415 ILE416 LEU417 VAL418 LYS419 GLU420 LYS421 GLY422 ILE423 LEU424 GLN425 GLY426 CYS427 ASN428 GLN429 MET430 HIS431 ALA432 SER433 TYR434 LEU435 PHE436 GLN437 GLN438 ASP439 LYS440 HIS441 TYR442 ASP443 VAL444 SER445 TYR446 ASP447 THR448 GLY449 ASP450 LYS451 ALA452 ILE453 GLN454 CYS455 GLY456 ARG457 HIS458 VAL459 ASP460 ILE461 PHE462 LYS463 PHE464 TRP465 LEU466 MET467 TRP468 LYS469 ALA470 LYS471 GLY472 THR473 VAL474 GLY475 PHE476 GLU477 ASN478 GLN479 ILE480 ASN481 LYS482 CYS483 LEU484 GLU485 LEU486 ALA487 GLU488 TYR489 LEU490 TYR491 ALA492 LYS493 ILE494 LYS495 ASN496 ARG497 GLU498 GLU499 PHE500 GLU501 MET502 VAL503 PHE504 ASN505 GLY506 GLU507 PRO508 GLU509 HIS510 THR511 ASN512 VAL513 CYS514 PHE515 TRP516 TYR517 ILE518 PRO519 GLN520 SER521 LEU522 ARG523 GLY524 VAL525 PRO526 ASP527 SER528 PRO529 GLN530 ARG531 ARG532 GLU533 LYS534 LEU535 HIS536 LYS537 VAL538 ALA539 PRO540 LYS541 ILE542 LYS543 ALA544 LEU545 MET546 MET547 GLU548 SER549 GLY550 THR551 THR552 MET553 VAL554 GLY555 TYR556 GLN557 PRO558 GLN559 GLY560 ASP561 LYS562 ALA563 ASN564 PHE565 PHE566 ARG567 MET568 VAL569 ILE570 SER571 ASN572 PRO573 ALA574 ALA575 THR576 GLN577 SER578 ASP579 ILE580 ASP581 PHE582 LEU583 ILE584 GLU585 GLU586 ILE587 GLU588 ARG589 LEU590 GLY591 GLN592 |
| Unit 2 | PHE95 SER96 ASN97 LEU98 PHE99 ALA100 ARG101 ASP102 LEU103 LEU104 PRO105 ALA106 LYS107 ASN108 GLY109 GLU110 GLU111 GLN112 THR113 VAL114 GLN115 PHE116 LEU117 LEU118 GLU119 VAL120 VAL121 ASP122 ILE123 LEU124 LEU125 ASN126 TYR127 VAL128 ARG129 LYS130 THR131 PHE132 ASP133 ARG134 SER135 THR136 LYS137 VAL138 LEU139 ASP140 PHE141 HIS142 HIS143 PRO144 HIS145 GLN146 LEU147 LEU148 GLU149 GLY150 MET151 GLU152 GLY153 PHE154 ASN155 LEU156 GLU157 LEU158 SER159 ASP160 HIS161 PRO162 GLU163 SER164 LEU165 GLU166 GLN167 ILE168 LEU169 VAL170 ASP171 CYS172 ARG173 ASP174 THR175 LEU176 LYS177 TYR178 GLY179 VAL180 ARG181 THR182 GLY183 HIS184 PRO185 ARG186 PHE187 PHE188 ASN189 GLN190 LEU191 SER192 THR193 GLY194 LEU195 ASP196 ILE197 ILE198 GLY199 LEU200 ALA201 GLY202 GLU203 TRP204 LEU205 THR206 SER207 THR208 ALA209 ASN210 THR211 ASN212 MET213 PHE214 THR215 TYR216 GLU217 ILE218 ALA219 PRO220 VAL221 PHE222 VAL223 LEU224 MET225 GLU226 GLN227 ILE228 THR229 LEU230 LYS231 LYS232 MET233 ARG234 GLU235 ILE236 VAL237 GLY238 TRP239 SER240 SER241 LYS242 ASP243 GLY244 ASP245 GLY246 ILE247 PHE248 SER249 PRO250 GLY251 GLY252 ALA253 ILE254 SER255 ASN256 MET257 TYR258 SER259 ILE260 MET261 ALA262 ALA263 ARG264 TYR265 LYS266 TYR267 PHE268 PRO269 GLU270 VAL271 LYS272 THR273 LYS274 GLY275 MET276 ALA277 ALA278 VAL279 PRO280 LYS281 LEU282 VAL283 LEU284 PHE285 THR286 SER287 GLU288 GLN289 SER290 HIS291 TYR292 SER293 ILE294 LYS295 LYS296 ALA297 GLY298 ALA299 ALA300 LEU301 GLY302 PHE303 GLY304 THR305 ASP306 ASN307 VAL308 ILE309 LEU310 ILE311 LYS312 CYS313 ASN314 GLU315 ARG316 GLY317 LYS318 ILE319 ILE320 PRO321 ALA322 ASP323 PHE324 GLU325 ALA326 LYS327 ILE328 LEU329 GLU330 ALA331 LYS332 GLN333 LYS334 GLY335 TYR336 VAL337 PRO338 PHE339 TYR340 VAL341 ASN342 ALA343 THR344 ALA345 GLY346 THR347 THR348 VAL349 TYR350 GLY351 ALA352 PHE353 ASP354 PRO355 ILE356 GLN357 GLU358 ILE359 ALA360 ASP361 ILE362 CYS363 GLU364 LYS365 TYR366 ASN367 LEU368 TRP369 LEU370 HIS371 VAL372 ASP373 ALA374 ALA375 TRP376 GLY377 GLY378 GLY379 LEU380 LEU381 MET382 SER383 ARG384 LYS385 HIS386 ARG387 HIS388 LYS389 LEU390 ASN391 GLY392 ILE393 GLU394 ARG395 ALA396 ASN397 SER398 VAL399 THR400 TRP401 ASN402 PRO403 HIS404 LLP405 MET406 MET407 GLY408 VAL409 LEU410 LEU411 GLN412 CYS413 SER414 ALA415 ILE416 LEU417 VAL418 LYS419 GLU420 LYS421 GLY422 ILE423 LEU424 GLN425 GLY426 CYS427 ASN428 GLN429 MET430 HIS431 ALA432 SER433 TYR434 LEU435 PHE436 GLN437 GLN438 ASP439 LYS440 HIS441 TYR442 ASP443 VAL444 SER445 TYR446 ASP447 THR448 GLY449 ASP450 LYS451 ALA452 ILE453 GLN454 CYS455 GLY456 ARG457 HIS458 VAL459 ASP460 ILE461 PHE462 LYS463 PHE464 TRP465 LEU466 MET467 TRP468 LYS469 ALA470 LYS471 GLY472 THR473 VAL474 GLY475 PHE476 GLU477 ASN478 GLN479 ILE480 ASN481 LYS482 CYS483 LEU484 GLU485 LEU486 ALA487 GLU488 TYR489 LEU490 TYR491 ALA492 LYS493 ILE494 LYS495 ASN496 ARG497 GLU498 GLU499 PHE500 GLU501 MET502 VAL503 PHE504 ASN505 GLY506 GLU507 PRO508 GLU509 HIS510 THR511 ASN512 VAL513 CYS514 PHE515 TRP516 TYR517 ILE518 PRO519 GLN520 SER521 ASP527 SER528 PRO529 GLN530 ARG531 ARG532 GLU533 LYS534 LEU535 HIS536 LYS537 VAL538 ALA539 PRO540 LYS541 ILE542 LYS543 ALA544 LEU545 MET546 MET547 GLU548 SER549 GLY550 THR551 THR552 MET553 VAL554 GLY555 TYR556 GLN557 PRO558 GLN559 GLY560 ASP561 LYS562 ALA563 ASN564 PHE565 PHE566 ARG567 MET568 VAL569 ILE570 SER571 ASN572 PRO573 ALA574 ALA575 THR576 GLN577 SER578 ASP579 ILE580 ASP581 PHE582 LEU583 ILE584 GLU585 GLU586 ILE587 GLU588 ARG589 LEU590 |
| Unit 3 | HLD1001 |
| Unit 4 | HLD1001 GOL1002 GOL1003 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |