Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF GC(8BRG)GCGGCGGC DUPLEX
Keywords CGG REPEATS, FRAGILE X MENTAL RETARDATION, 8-BROMOGUANOSINE,
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3R1D     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA/RNA    A 13 645 83
2  RNA    B 11 215 24
3  DNA/RNA    C 13 645 83
4  RNA    D 11 215 24
5  DNA/RNA    E 13 645 83
6  Ligand    A 3 0 11
7  DNA/RNA    B 13 645 83
8  Ligand    C 2 0 10
9  DNA/RNA    D 13 645 83
10  Ligand    E 2 0 10
11 Water     206 0 206
total       300 3655 700
Nucleic acids
Unit 1 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11 BR12 SO413
Unit 2 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11
Unit 3 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11 BR12 SO413
Unit 4 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11
Unit 5 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11 BR12 SO413
Unit 7 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11 BR12 SO413
Unit 9 G1 C2 GRB3 G4 C5 G6 G7 C8 G9 G10 C11 BR12 SO413
Ligands
Unit 6 BR12 SO413 SO414
Unit 8 SO412 SO413
Unit 10 SO412 SO413
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany