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Title | CRYSTAL STRUCTURE OF THE ENE, A VIRAL RNA STABILITY ELEMENT, COMPLEX WITH A9 RNA | |
Keywords | MAJOR GROOVE TRIPLE HELIX, VIRAL NON-CODING RNA, STABILITY E NUCLEUS, RNA | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3P22 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 40 | 821 | 32 | |
2 | RNA | B | 9 | 195 | 0 | |
3 | RNA | C | 40 | 821 | 32 | |
4 | RNA | D | 8 | 173 | 0 | |
5 | RNA | E | 40 | 821 | 32 | |
6 | RNA | F | 9 | 195 | 0 | |
7 | RNA | G | 40 | 821 | 32 | |
8 | RNA | H | 8 | 173 | 0 | |
9 | Water | 18 | 0 | 18 | ||
total | 212 | 4020 | 146 |
Unit 1 | GTP1 G2 C3 U4 G5 G6 G7 U8 U9 U10 U11 U12 C13 C14 U15 U16 C17 G18 A19 A20 A21 G22 A23 A24 G25 G26 U27 U28 U29 U30 U31 A32 U33 C34 C35 C36 A37 G38 U39 C40 |
Unit 2 | A1 A2 A3 A4 A5 A6 A7 A8 A9 |
Unit 3 | GTP1 G2 C3 U4 G5 G6 G7 U8 U9 U10 U11 U12 C13 C14 U15 U16 C17 G18 A19 A20 A21 G22 A23 A24 G25 G26 U27 U28 U29 U30 U31 A32 U33 C34 C35 C36 A37 G38 U39 C40 |
Unit 4 | A1 A2 A3 A4 A5 A6 A7 A8 |
Unit 5 | GTP1 G2 C3 U4 G5 G6 G7 U8 U9 U10 U11 U12 C13 C14 U15 U16 C17 G18 A19 A20 A21 G22 A23 A24 G25 G26 U27 U28 U29 U30 U31 A32 U33 C34 C35 C36 A37 G38 U39 C40 |
Unit 6 | A1 A2 A3 A4 A5 A6 A7 A8 A9 |
Unit 7 | GTP1 G2 C3 U4 G5 G6 G7 U8 U9 U10 U11 U12 C13 C14 U15 U16 C17 G18 A19 A20 A21 G22 A23 A24 G25 G26 U27 U28 U29 U30 U31 A32 U33 C34 C35 C36 A37 G38 U39 C40 |
Unit 8 | A1 A2 A3 A4 A5 A6 A7 A8 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |