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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MLL1 PHD3-BROMO COMPLEXED WITH H3(1-9)K PEPTIDE
Keywords PHD FINGER, BROMODOMAIN, MLL1, LEUKEMIA, H3(1-9)K4ME2, CHROM PROTEIN, DNA-BINDING, NUCLEOSOME CORE, NUCLEUS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MLL1 PHD3-BROMO  A 176 1435 0
2  Protein   MLL1 PHD3-BROMO  B 177 1442 0
3  Protein   MLL1 PHD3-BROMO  C 181 1468 0
4  Protein   HISTONE H3  R 6 39 11
5  Protein   HISTONE H3  S 7 44 11
6  Protein   HISTONE H3  T 9 65 11
7  Ligand   MLL1 PHD3-BROMO  A 2 0 2
8  Ligand   MLL1 PHD3-BROMO  B 2 0 2
9  Ligand   MLL1 PHD3-BROMO  C 2 0 2
10 Water     369 0 369
total       931 4493 408

Proteins
Unit 1 SER1565 GLY1566 ASN1567 PHE1568 CYS1569 PRO1570 LEU1571 CYS1572 ASP1573 LYS1574 CYS1575 TYR1576 ASP1577 ASP1578 ASP1579 ASP1580 TYR1581 GLU1582 SER1583 LYS1584 MET1585 MET1586 GLN1587 CYS1588 GLY1589 LYS1590 CYS1591 ASP1592 ARG1593 TRP1594 VAL1595 HIS1596 SER1597 LYS1598 CYS1599 GLU1600 ASN1601 LEU1602 SER1603 ASP1604 GLU1605 MET1606 TYR1607 GLU1608 ILE1609 LEU1610 SER1611 ASN1612 LEU1613 PRO1614 GLU1615 SER1616 VAL1617 ALA1618 TYR1619 THR1620 CYS1621 VAL1622 ASN1623 CYS1624 THR1625 GLU1626 ARG1627 HIS1628 PRO1629 ALA1630 GLU1631 TRP1632 ARG1633 LEU1634 ALA1635 LEU1636 GLU1637 LYS1638 GLU1639 LEU1640 GLN1641 ILE1642 SER1643 LEU1644 LYS1645 GLN1646 VAL1647 LEU1648 THR1649 ALA1650 LEU1651 LEU1652 ASN1653 SER1654 ARG1655 THR1656 THR1657 SER1658 HIS1659 LEU1660 LEU1661 ARG1662 TYR1663 ARG1664 GLN1665 GLN1704 PRO1705 LEU1706 ASP1707 LEU1708 GLU1709 GLY1710 VAL1711 LYS1712 ARG1713 LYS1714 MET1715 ASP1716 GLN1717 GLY1718 ASN1719 TYR1720 THR1721 SER1722 VAL1723 LEU1724 GLU1725 PHE1726 SER1727 ASP1728 ASP1729 ILE1730 VAL1731 LYS1732 ILE1733 ILE1734 GLN1735 ALA1736 ALA1737 ILE1738 ASN1739 SER1740 ASP1741 GLY1742 GLY1743 GLN1744 PRO1745 GLU1746 ILE1747 LYS1748 LYS1749 ALA1750 ASN1751 SER1752 MET1753 VAL1754 LYS1755 SER1756 PHE1757 PHE1758 ILE1759 ARG1760 GLN1761 MET1762 GLU1763 ARG1764 VAL1765 PHE1766 PRO1767 TRP1768 PHE1769 SER1770 VAL1771 LYS1772 LYS1773 SER1774 ARG1775 PHE1776 TRP1777 GLU1778
Unit 2 SER1565 GLY1566 ASN1567 PHE1568 CYS1569 PRO1570 LEU1571 CYS1572 ASP1573 LYS1574 CYS1575 TYR1576 ASP1577 ASP1578 ASP1579 ASP1580 TYR1581 GLU1582 SER1583 LYS1584 MET1585 MET1586 GLN1587 CYS1588 GLY1589 LYS1590 CYS1591 ASP1592 ARG1593 TRP1594 VAL1595 HIS1596 SER1597 LYS1598 CYS1599 GLU1600 ASN1601 LEU1602 SER1603 ASP1604 GLU1605 MET1606 TYR1607 GLU1608 ILE1609 LEU1610 SER1611 ASN1612 LEU1613 PRO1614 GLU1615 SER1616 VAL1617 ALA1618 TYR1619 THR1620 CYS1621 VAL1622 ASN1623 CYS1624 THR1625 GLU1626 ARG1627 HIS1628 PRO1629 ALA1630 GLU1631 TRP1632 ARG1633 LEU1634 ALA1635 LEU1636 GLU1637 LYS1638 GLU1639 LEU1640 GLN1641 ILE1642 SER1643 LEU1644 LYS1645 GLN1646 VAL1647 LEU1648 THR1649 ALA1650 LEU1651 LEU1652 ASN1653 SER1654 ARG1655 THR1656 THR1657 SER1658 HIS1659 LEU1660 LEU1661 ARG1662 TYR1663 ARG1664 GLN1665 GLN1704 PRO1705 LEU1706 ASP1707 LEU1708 GLU1709 GLY1710 VAL1711 LYS1712 ARG1713 LYS1714 MET1715 ASP1716 GLN1717 GLY1718 ASN1719 TYR1720 THR1721 SER1722 VAL1723 LEU1724 GLU1725 PHE1726 SER1727 ASP1728 ASP1729 ILE1730 VAL1731 LYS1732 ILE1733 ILE1734 GLN1735 ALA1736 ALA1737 ILE1738 ASN1739 SER1740 ASP1741 GLY1742 GLY1743 GLN1744 PRO1745 GLU1746 ILE1747 LYS1748 LYS1749 ALA1750 ASN1751 SER1752 MET1753 VAL1754 LYS1755 SER1756 PHE1757 PHE1758 ILE1759 ARG1760 GLN1761 MET1762 GLU1763 ARG1764 VAL1765 PHE1766 PRO1767 TRP1768 PHE1769 SER1770 VAL1771 LYS1772 LYS1773 SER1774 ARG1775 PHE1776 TRP1777 GLU1778 PRO1779
Unit 3 SER1565 GLY1566 ASN1567 PHE1568 CYS1569 PRO1570 LEU1571 CYS1572 ASP1573 LYS1574 CYS1575 TYR1576 ASP1577 ASP1578 ASP1579 ASP1580 TYR1581 GLU1582 SER1583 LYS1584 MET1585 MET1586 GLN1587 CYS1588 GLY1589 LYS1590 CYS1591 ASP1592 ARG1593 TRP1594 VAL1595 HIS1596 SER1597 LYS1598 CYS1599 GLU1600 ASN1601 LEU1602 SER1603 ASP1604 GLU1605 MET1606 TYR1607 GLU1608 ILE1609 LEU1610 SER1611 ASN1612 LEU1613 PRO1614 GLU1615 SER1616 VAL1617 ALA1618 TYR1619 THR1620 CYS1621 VAL1622 ASN1623 CYS1624 THR1625 GLU1626 ARG1627 HIS1628 PRO1629 ALA1630 GLU1631 TRP1632 ARG1633 LEU1634 ALA1635 LEU1636 GLU1637 LYS1638 GLU1639 LEU1640 GLN1641 ILE1642 SER1643 LEU1644 LYS1645 GLN1646 VAL1647 LEU1648 THR1649 ALA1650 LEU1651 LEU1652 ASN1653 SER1654 ARG1655 THR1656 THR1657 SER1658 HIS1659 LEU1660 LEU1661 ARG1662 TYR1663 GLN1703 GLN1704 PRO1705 LEU1706 ASP1707 LEU1708 GLU1709 GLY1710 VAL1711 LYS1712 ARG1713 LYS1714 MET1715 ASP1716 GLN1717 GLY1718 ASN1719 TYR1720 THR1721 SER1722 VAL1723 LEU1724 GLU1725 PHE1726 SER1727 ASP1728 ASP1729 ILE1730 VAL1731 LYS1732 ILE1733 ILE1734 GLN1735 ALA1736 ALA1737 ILE1738 ASN1739 SER1740 ASP1741 GLY1742 GLY1743 GLN1744 PRO1745 GLU1746 ILE1747 LYS1748 LYS1749 ALA1750 ASN1751 SER1752 MET1753 VAL1754 LYS1755 SER1756 PHE1757 PHE1758 ILE1759 ARG1760 GLN1761 MET1762 GLU1763 ARG1764 VAL1765 PHE1766 PRO1767 TRP1768 PHE1769 SER1770 VAL1771 LYS1772 LYS1773 SER1774 ARG1775 PHE1776 TRP1777 GLU1778 PRO1779 ASN1780 LYS1781 VAL1782 SER1783 SER1784
Unit 4 ALA1 ARG2 THR3 MLY4 GLN5 THR6
Unit 5 ALA1 ARG2 THR3 MLY4 GLN5 THR6 ALA7
Unit 6 ALA1 ARG2 THR3 MLY4 GLN5 THR6 ALA7 ARG8 LYS9

Ligands
Unit 7 ZN1 ZN2
Unit 8 ZN3 ZN4
Unit 9 ZN5 ZN6

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany