3KMV - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CBM42A FROM CLOSTRIDIUM THERMOCELLUM
• Keywords: PROTEIN:CARBOYDRATE INTERACTIONS, CARBOHYDRATE-BINDING MODUL TREFOIL FOLD, CBM42, SUGAR BINDING PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3KMV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ALPHA-L-ARABINOFURANOSIDASE B	A	136	1118	0
2	Protein	ALPHA-L-ARABINOFURANOSIDASE B	B	138	1134	0
3	Protein	ALPHA-L-ARABINOFURANOSIDASE B	C	137	1125	0
4	Protein	ALPHA-L-ARABINOFURANOSIDASE B	D	138	1133	0
5	Protein	ALPHA-L-ARABINOFURANOSIDASE B	E	140	1149	0
6	Protein	ALPHA-L-ARABINOFURANOSIDASE B	F	137	1125	0
7	Protein	ALPHA-L-ARABINOFURANOSIDASE B	G	138	1134	0
8	Protein	ALPHA-L-ARABINOFURANOSIDASE B	H	139	1140	0
9	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	A	6	0	19
10	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	B	5	0	13
11	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	C	6	0	19
12	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	D	2	0	7
13	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	E	4	0	13
14	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	F	3	0	10
15	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	G	5	0	14
16	Ligand	ALPHA-L-ARABINOFURANOSIDASE B	H	3	0	10
17	Water			863	0	863
total				2000	9058	968

Proteins

Unit 1	LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145
Unit 2	THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145 GLU 146
Unit 3	THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145
Unit 4	ILE 8 THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145
Unit 5	PRO 7 ILE 8 THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145 GLU 146
Unit 6	THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145
Unit 7	THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145 GLU 146
Unit 8	PRO 7 ILE 8 THR 9 LYS 10 ALA 11 LYS 12 PHE 13 GLN 14 SER 15 TYR 16 ASN 17 TYR 18 PRO 19 ASN 20 MET 21 TYR 22 ILE 23 ARG 24 HIS 25 ALA 26 ASN 27 PHE 28 ASP 29 ALA 30 ARG 31 ILE 32 ASP 33 GLU 34 ASN 35 VAL 36 THR 37 PRO 38 GLU 39 MET 40 ASP 41 SER 42 GLN 43 TRP 44 GLU 45 LEU 46 VAL 47 PRO 48 GLY 49 LEU 50 ALA 51 ASN 52 SER 53 GLY 54 ASP 55 GLY 56 TYR 57 VAL 58 SER 59 ILE 60 GLN 61 SER 62 VAL 63 ASN 64 TYR 65 PRO 66 GLY 67 TYR 68 TYR 69 LEU 70 ARG 71 HIS 72 SER 73 ASN 74 TYR 75 ASP 76 LEU 77 SER 78 LEU 79 GLU 80 LYS 81 ASN 82 ASP 83 GLY 84 THR 85 SER 86 LEU 87 PHE 88 ALA 89 GLU 90 SER 91 ALA 92 THR 93 PHE 94 LYS 95 ILE 96 VAL 97 PRO 98 GLY 99 LEU 100 ALA 101 ASP 102 PRO 103 SER 104 TYR 105 ILE 106 SER 107 PHE 108 GLN 109 SER 110 TYR 111 ASN 112 PHE 113 PRO 114 THR 115 ARG 116 TYR 117 ILE 118 ARG 119 HIS 120 TYR 121 ASN 122 TYR 123 LEU 124 LEU 125 ARG 126 LEU 127 ASP 128 GLU 129 ILE 130 VAL 131 THR 132 GLU 133 LEU 134 ASP 135 ARG 136 GLN 137 ASP 138 ALA 139 THR 140 PHE 141 LYS 142 ILE 143 ILE 144 SER 145

Ligands

Unit 9	GOL 158 FMT 159 FMT 160 FMT 161 FMT 162 CA 163
Unit 10	FMT 158 FMT 159 FMT 160 FMT 161 CA 162
Unit 11	GOL 158 FMT 159 FMT 160 FMT 161 FMT 162 CA 163
Unit 12	GOL 158 CA 159
Unit 13	GOL 158 FMT 159 FMT 160 CA 161
Unit 14	GOL 158 FMT 159 CA 160
Unit 15	ACT 158 FMT 159 FMT 160 FMT 161 CA 162
Unit 16	GOL 158 FMT 159 CA 160