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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFE BACILLUS ANTHRACIS WITH BOUND PYRIDOXAL 5'PHOSPHATE
Keywords BIOSYNTHESIS OF COFACTORS, PROSTHETIC GROUPS, AND CARRIERS, CYTOPLASM, ISOMERASE, PORPHYRIN BIOSYNTHESIS, PYRIDOXAL PHO STRUCTURAL GENOMICS, NATIONAL INSTITUTE OF ALLERGY AND INFE DISEASES, NATIONAL INSTITUTES OF HEALTH, DEPARTMENT OF HEAL HUMAN SERVICES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOU DISEASES, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3K28     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  A 423 3081 112
2  Protein   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  B 422 3075 112
3  Protein   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  C 422 3068 112
4  Protein   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  D 420 3057 112
5  Ligand   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  A 4 0 18
6  Ligand   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  B 5 0 19
7  Ligand   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  C 4 0 18
8  Ligand   GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2  D 5 0 19
9 Water     1500 0 1500
total       3205 12281 2022

Proteins
Unit 1 MSE1 ARG2 LYS3 PHE4 ASP5 LYS6 SER7 ILE8 ALA9 ALA10 PHE11 GLU12 GLU13 ALA14 GLN15 ASP16 LEU17 MSE18 PRO19 GLY20 GLY21 VAL22 ASN23 SER24 PRO25 VAL26 ARG27 ALA28 PHE29 LYS30 SER31 VAL32 GLY33 MSE34 ASN35 PRO36 LEU37 PHE38 MSE39 GLU40 ARG41 GLY42 LYS43 GLY44 SER45 LYS46 VAL47 TYR48 ASP49 ILE50 ASP51 GLY52 ASN53 GLU54 TYR55 ILE56 ASP57 TYR58 VAL59 LEU60 SER61 TRP62 GLY63 PRO64 LEU65 ILE66 HIS67 GLY68 HIS69 ALA70 ASN71 ASP72 ARG73 VAL74 VAL75 GLU76 ALA77 LEU78 LYS79 ALA80 VAL81 ALA82 GLU83 ARG84 GLY85 THR86 SER87 PHE88 GLY89 ALA90 PRO91 THR92 GLU93 ILE94 GLU95 ASN96 LYS97 LEU98 ALA99 LYS100 LEU101 VAL102 ILE103 GLU104 ARG105 VAL106 PRO107 SER108 ILE109 GLU110 ILE111 VAL112 ARG113 MSE114 VAL115 ASN116 SER117 GLY118 THR119 GLU120 ALA121 THR122 MSE123 SER124 ALA125 LEU126 ARG127 LEU128 ALA129 ARG130 GLY131 TYR132 THR133 GLY134 ARG135 ASN136 LYS137 ILE138 LEU139 LYS140 PHE141 ILE142 GLY143 CYS144 TYR145 HIS146 GLY147 HIS148 GLY149 ASP150 SER151 LEU152 LEU153 ILE154 LYS155 ALA156 GLY157 SER158 GLY159 VAL160 PRO166 ASP167 SER168 PRO169 GLY170 VAL171 PRO172 GLU173 GLY174 VAL175 ALA176 LYS177 ASN178 THR179 ILE180 THR181 VAL182 ALA183 TYR184 ASN185 ASP186 LEU187 GLU188 SER189 VAL190 LYS191 TYR192 ALA193 PHE194 GLU195 GLN196 PHE197 GLY198 ASP199 ASP200 ILE201 ALA202 CYS203 VAL204 ILE205 VAL206 GLU207 PRO208 VAL209 ALA210 GLY211 ASN212 MSE213 GLY214 VAL215 VAL216 PRO217 PRO218 GLN219 PRO220 GLY221 PHE222 LEU223 GLU224 GLY225 LEU226 ARG227 GLU228 VAL229 THR230 GLU231 GLN232 ASN233 GLY234 ALA235 LEU236 LEU237 ILE238 PHE239 ASP240 GLU241 VAL242 MSE243 THR244 GLY245 PHE246 ARG247 VAL248 ALA249 TYR250 ASN251 CYS252 GLY253 GLN254 GLY255 TYR256 TYR257 GLY258 VAL259 THR260 PRO261 ASP262 LEU263 THR264 CYS265 LEU266 GLY267 LYS268 VAL269 ILE270 GLY271 GLY272 GLY273 LEU274 PRO275 VAL276 GLY277 ALA278 TYR279 GLY280 GLY281 LYS282 ALA283 GLU284 ILE285 MSE286 ARG287 GLN288 VAL289 ALA290 PRO291 SER292 GLY293 PRO294 ILE295 TYR296 GLN297 ALA298 GLY299 THR300 LEU301 SER302 GLY303 ASN304 PRO305 LEU306 ALA307 MSE308 ALA309 ALA310 GLY311 TYR312 GLU313 THR314 LEU315 VAL316 GLN317 LEU318 THR319 PRO320 GLU321 SER322 TYR323 VAL324 GLU325 PHE326 GLU327 ARG328 LYS329 ALA330 GLU331 MSE332 LEU333 GLU334 ALA335 GLY336 LEU337 ARG338 LYS339 ALA340 ALA341 GLU342 LYS343 HIS344 GLY345 ILE346 PRO347 HIS348 HIS349 ILE350 ASN351 ARG352 ALA353 GLY354 SER355 MSE356 ILE357 GLY358 ILE359 PHE360 PHE361 THR362 ASP363 GLU364 PRO365 VAL366 ILE367 ASN368 TYR369 ASP370 ALA371 ALA372 LYS373 SER374 SER375 ASN376 LEU377 GLN378 PHE379 PHE380 ALA381 ALA382 TYR383 TYR384 ARG385 GLU386 MSE387 VAL388 GLU389 GLN390 GLY391 VAL392 PHE393 LEU394 PRO395 PRO396 SER397 GLN398 PHE399 GLU400 GLY401 LEU402 PHE403 LEU404 SER405 THR406 VAL407 HIS408 SER409 ASP410 ALA411 ASP412 ILE413 GLU414 ALA415 THR416 ILE417 ALA418 ALA419 ALA420 GLU421 ILE422 ALA423 MSE424 SER425 LYS426 LEU427 LYS428
Unit 2 MSE1 ARG2 LYS3 PHE4 ASP5 LYS6 SER7 ILE8 ALA9 ALA10 PHE11 GLU12 GLU13 ALA14 GLN15 ASP16 LEU17 MSE18 PRO19 GLY20 GLY21 VAL22 ASN23 SER24 PRO25 VAL26 ARG27 ALA28 PHE29 LYS30 SER31 VAL32 GLY33 MSE34 ASN35 PRO36 LEU37 PHE38 MSE39 GLU40 ARG41 GLY42 LYS43 GLY44 SER45 LYS46 VAL47 TYR48 ASP49 ILE50 ASP51 GLY52 ASN53 GLU54 TYR55 ILE56 ASP57 TYR58 VAL59 LEU60 SER61 TRP62 GLY63 PRO64 LEU65 ILE66 HIS67 GLY68 HIS69 ALA70 ASN71 ASP72 ARG73 VAL74 VAL75 GLU76 ALA77 LEU78 LYS79 ALA80 VAL81 ALA82 GLU83 ARG84 GLY85 THR86 SER87 PHE88 GLY89 ALA90 PRO91 THR92 GLU93 ILE94 GLU95 ASN96 LYS97 LEU98 ALA99 LYS100 LEU101 VAL102 ILE103 GLU104 ARG105 VAL106 PRO107 SER108 ILE109 GLU110 ILE111 VAL112 ARG113 MSE114 VAL115 ASN116 SER117 GLY118 THR119 GLU120 ALA121 THR122 MSE123 SER124 ALA125 LEU126 ARG127 LEU128 ALA129 ARG130 GLY131 TYR132 THR133 GLY134 ARG135 ASN136 LYS137 ILE138 LEU139 LYS140 PHE141 ILE142 GLY143 CYS144 TYR145 HIS146 GLY147 HIS148 GLY149 ASP150 SER151 LEU152 LEU153 ILE154 LYS155 ALA156 GLY157 SER158 GLY159 VAL160 ASP167 SER168 PRO169 GLY170 VAL171 PRO172 GLU173 GLY174 VAL175 ALA176 LYS177 ASN178 THR179 ILE180 THR181 VAL182 ALA183 TYR184 ASN185 ASP186 LEU187 GLU188 SER189 VAL190 LYS191 TYR192 ALA193 PHE194 GLU195 GLN196 PHE197 GLY198 ASP199 ASP200 ILE201 ALA202 CYS203 VAL204 ILE205 VAL206 GLU207 PRO208 VAL209 ALA210 GLY211 ASN212 MSE213 GLY214 VAL215 VAL216 PRO217 PRO218 GLN219 PRO220 GLY221 PHE222 LEU223 GLU224 GLY225 LEU226 ARG227 GLU228 VAL229 THR230 GLU231 GLN232 ASN233 GLY234 ALA235 LEU236 LEU237 ILE238 PHE239 ASP240 GLU241 VAL242 MSE243 THR244 GLY245 PHE246 ARG247 VAL248 ALA249 TYR250 ASN251 CYS252 GLY253 GLN254 GLY255 TYR256 TYR257 GLY258 VAL259 THR260 PRO261 ASP262 LEU263 THR264 CYS265 LEU266 GLY267 LYS268 VAL269 ILE270 GLY271 GLY272 GLY273 LEU274 PRO275 VAL276 GLY277 ALA278 TYR279 GLY280 GLY281 LYS282 ALA283 GLU284 ILE285 MSE286 ARG287 GLN288 VAL289 ALA290 PRO291 SER292 GLY293 PRO294 ILE295 TYR296 GLN297 ALA298 GLY299 THR300 LEU301 SER302 GLY303 ASN304 PRO305 LEU306 ALA307 MSE308 ALA309 ALA310 GLY311 TYR312 GLU313 THR314 LEU315 VAL316 GLN317 LEU318 THR319 PRO320 GLU321 SER322 TYR323 VAL324 GLU325 PHE326 GLU327 ARG328 LYS329 ALA330 GLU331 MSE332 LEU333 GLU334 ALA335 GLY336 LEU337 ARG338 LYS339 ALA340 ALA341 GLU342 LYS343 HIS344 GLY345 ILE346 PRO347 HIS348 HIS349 ILE350 ASN351 ARG352 ALA353 GLY354 SER355 MSE356 ILE357 GLY358 ILE359 PHE360 PHE361 THR362 ASP363 GLU364 PRO365 VAL366 ILE367 ASN368 TYR369 ASP370 ALA371 ALA372 LYS373 SER374 SER375 ASN376 LEU377 GLN378 PHE379 PHE380 ALA381 ALA382 TYR383 TYR384 ARG385 GLU386 MSE387 VAL388 GLU389 GLN390 GLY391 VAL392 PHE393 LEU394 PRO395 PRO396 SER397 GLN398 PHE399 GLU400 GLY401 LEU402 PHE403 LEU404 SER405 THR406 VAL407 HIS408 SER409 ASP410 ALA411 ASP412 ILE413 GLU414 ALA415 THR416 ILE417 ALA418 ALA419 ALA420 GLU421 ILE422 ALA423 MSE424 SER425 LYS426 LEU427 LYS428
Unit 3 MSE1 ARG2 LYS3 PHE4 ASP5 LYS6 SER7 ILE8 ALA9 ALA10 PHE11 GLU12 GLU13 ALA14 GLN15 ASP16 LEU17 MSE18 PRO19 GLY20 GLY21 VAL22 ASN23 SER24 PRO25 VAL26 ARG27 ALA28 PHE29 LYS30 SER31 VAL32 GLY33 MSE34 ASN35 PRO36 LEU37 PHE38 MSE39 GLU40 ARG41 GLY42 LYS43 GLY44 SER45 LYS46 VAL47 TYR48 ASP49 ILE50 ASP51 GLY52 ASN53 GLU54 TYR55 ILE56 ASP57 TYR58 VAL59 LEU60 SER61 TRP62 GLY63 PRO64 LEU65 ILE66 HIS67 GLY68 HIS69 ALA70 ASN71 ASP72 ARG73 VAL74 VAL75 GLU76 ALA77 LEU78 LYS79 ALA80 VAL81 ALA82 GLU83 ARG84 GLY85 THR86 SER87 PHE88 GLY89 ALA90 PRO91 THR92 GLU93 ILE94 GLU95 ASN96 LYS97 LEU98 ALA99 LYS100 LEU101 VAL102 ILE103 GLU104 ARG105 VAL106 PRO107 SER108 ILE109 GLU110 ILE111 VAL112 ARG113 MSE114 VAL115 ASN116 SER117 GLY118 THR119 GLU120 ALA121 THR122 MSE123 SER124 ALA125 LEU126 ARG127 LEU128 ALA129 ARG130 GLY131 TYR132 THR133 GLY134 ARG135 ASN136 LYS137 ILE138 LEU139 LYS140 PHE141 ILE142 GLY143 CYS144 TYR145 HIS146 GLY147 HIS148 GLY149 ASP150 SER151 LEU152 LEU153 ILE154 LYS155 ALA156 GLY157 SER158 GLY159 VAL160 ASP167 SER168 PRO169 GLY170 VAL171 PRO172 GLU173 GLY174 VAL175 ALA176 LYS177 ASN178 THR179 ILE180 THR181 VAL182 ALA183 TYR184 ASN185 ASP186 LEU187 GLU188 SER189 VAL190 LYS191 TYR192 ALA193 PHE194 GLU195 GLN196 PHE197 GLY198 ASP199 ASP200 ILE201 ALA202 CYS203 VAL204 ILE205 VAL206 GLU207 PRO208 VAL209 ALA210 GLY211 ASN212 MSE213 GLY214 VAL215 VAL216 PRO217 PRO218 GLN219 PRO220 GLY221 PHE222 LEU223 GLU224 GLY225 LEU226 ARG227 GLU228 VAL229 THR230 GLU231 GLN232 ASN233 GLY234 ALA235 LEU236 LEU237 ILE238 PHE239 ASP240 GLU241 VAL242 MSE243 THR244 GLY245 PHE246 ARG247 VAL248 ALA249 TYR250 ASN251 CYS252 GLY253 GLN254 GLY255 TYR256 TYR257 GLY258 VAL259 THR260 PRO261 ASP262 LEU263 THR264 CYS265 LEU266 GLY267 LYS268 VAL269 ILE270 GLY271 GLY272 GLY273 LEU274 PRO275 VAL276 GLY277 ALA278 TYR279 GLY280 GLY281 LYS282 ALA283 GLU284 ILE285 MSE286 ARG287 GLN288 VAL289 ALA290 PRO291 SER292 GLY293 PRO294 ILE295 TYR296 GLN297 ALA298 GLY299 THR300 LEU301 SER302 GLY303 ASN304 PRO305 LEU306 ALA307 MSE308 ALA309 ALA310 GLY311 TYR312 GLU313 THR314 LEU315 VAL316 GLN317 LEU318 THR319 PRO320 GLU321 SER322 TYR323 VAL324 GLU325 PHE326 GLU327 ARG328 LYS329 ALA330 GLU331 MSE332 LEU333 GLU334 ALA335 GLY336 LEU337 ARG338 LYS339 ALA340 ALA341 GLU342 LYS343 HIS344 GLY345 ILE346 PRO347 HIS348 HIS349 ILE350 ASN351 ARG352 ALA353 GLY354 SER355 MSE356 ILE357 GLY358 ILE359 PHE360 PHE361 THR362 ASP363 GLU364 PRO365 VAL366 ILE367 ASN368 TYR369 ASP370 ALA371 ALA372 LYS373 SER374 SER375 ASN376 LEU377 GLN378 PHE379 PHE380 ALA381 ALA382 TYR383 TYR384 ARG385 GLU386 MSE387 VAL388 GLU389 GLN390 GLY391 VAL392 PHE393 LEU394 PRO395 PRO396 SER397 GLN398 PHE399 GLU400 GLY401 LEU402 PHE403 LEU404 SER405 THR406 VAL407 HIS408 SER409 ASP410 ALA411 ASP412 ILE413 GLU414 ALA415 THR416 ILE417 ALA418 ALA419 ALA420 GLU421 ILE422 ALA423 MSE424 SER425 LYS426 LEU427 LYS428
Unit 4 MSE1 ARG2 LYS3 PHE4 ASP5 LYS6 SER7 ILE8 ALA9 ALA10 PHE11 GLU12 GLU13 ALA14 GLN15 ASP16 LEU17 MSE18 PRO19 GLY20 GLY21 VAL22 ASN23 SER24 PRO25 VAL26 ARG27 ALA28 PHE29 LYS30 SER31 VAL32 GLY33 MSE34 ASN35 PRO36 LEU37 PHE38 MSE39 GLU40 ARG41 GLY42 LYS43 GLY44 SER45 LYS46 VAL47 TYR48 ASP49 ILE50 ASP51 GLY52 ASN53 GLU54 TYR55 ILE56 ASP57 TYR58 VAL59 LEU60 SER61 TRP62 GLY63 PRO64 LEU65 ILE66 HIS67 GLY68 HIS69 ALA70 ASN71 ASP72 ARG73 VAL74 VAL75 GLU76 ALA77 LEU78 LYS79 ALA80 VAL81 ALA82 GLU83 ARG84 GLY85 THR86 SER87 PHE88 GLY89 ALA90 PRO91 THR92 GLU93 ILE94 GLU95 ASN96 LYS97 LEU98 ALA99 LYS100 LEU101 VAL102 ILE103 GLU104 ARG105 VAL106 PRO107 SER108 ILE109 GLU110 ILE111 VAL112 ARG113 MSE114 VAL115 ASN116 SER117 GLY118 THR119 GLU120 ALA121 THR122 MSE123 SER124 ALA125 LEU126 ARG127 LEU128 ALA129 ARG130 GLY131 TYR132 THR133 GLY134 ARG135 ASN136 LYS137 ILE138 LEU139 LYS140 PHE141 ILE142 GLY143 CYS144 TYR145 HIS146 GLY147 HIS148 GLY149 ASP150 SER151 LEU152 LEU153 ILE154 LYS155 ALA156 LEU165 PRO166 ASP167 SER168 PRO169 GLY170 VAL171 PRO172 GLU173 GLY174 VAL175 ALA176 LYS177 ASN178 THR179 ILE180 THR181 VAL182 ALA183 TYR184 ASN185 ASP186 LEU187 GLU188 SER189 VAL190 LYS191 TYR192 ALA193 PHE194 GLU195 GLN196 PHE197 GLY198 ASP199 ASP200 ILE201 ALA202 CYS203 VAL204 ILE205 VAL206 GLU207 PRO208 VAL209 ALA210 GLY211 ASN212 MSE213 GLY214 VAL215 VAL216 PRO217 PRO218 GLN219 PRO220 GLY221 PHE222 LEU223 GLU224 GLY225 LEU226 ARG227 GLU228 VAL229 THR230 GLU231 GLN232 ASN233 GLY234 ALA235 LEU236 LEU237 ILE238 PHE239 ASP240 GLU241 VAL242 MSE243 THR244 GLY245 PHE246 ARG247 VAL248 ALA249 TYR250 ASN251 CYS252 GLY253 GLN254 GLY255 TYR256 TYR257 GLY258 VAL259 THR260 PRO261 ASP262 LEU263 THR264 CYS265 LEU266 GLY267 LYS268 VAL269 ILE270 GLY271 GLY272 GLY273 LEU274 PRO275 VAL276 GLY277 ALA278 TYR279 GLY280 GLY281 LYS282 ALA283 GLU284 ILE285 MSE286 ARG287 GLN288 VAL289 ALA290 PRO291 SER292 GLY293 PRO294 ILE295 TYR296 GLN297 ALA298 GLY299 THR300 LEU301 SER302 GLY303 ASN304 PRO305 LEU306 ALA307 MSE308 ALA309 ALA310 GLY311 TYR312 GLU313 THR314 LEU315 VAL316 GLN317 LEU318 THR319 PRO320 GLU321 SER322 TYR323 VAL324 GLU325 PHE326 GLU327 ARG328 LYS329 ALA330 GLU331 MSE332 LEU333 GLU334 ALA335 GLY336 LEU337 ARG338 LYS339 ALA340 ALA341 GLU342 LYS343 HIS344 GLY345 ILE346 PRO347 HIS348 HIS349 ILE350 ASN351 ARG352 ALA353 GLY354 SER355 MSE356 ILE357 GLY358 ILE359 PHE360 PHE361 THR362 ASP363 GLU364 PRO365 VAL366 ILE367 ASN368 TYR369 ASP370 ALA371 ALA372 LYS373 SER374 SER375 ASN376 LEU377 GLN378 PHE379 PHE380 ALA381 ALA382 TYR383 TYR384 ARG385 GLU386 MSE387 VAL388 GLU389 GLN390 GLY391 VAL392 PHE393 LEU394 PRO395 PRO396 SER397 GLN398 PHE399 GLU400 GLY401 LEU402 PHE403 LEU404 SER405 THR406 VAL407 HIS408 SER409 ASP410 ALA411 ASP412 ILE413 GLU414 ALA415 THR416 ILE417 ALA418 ALA419 ALA420 GLU421 ILE422 ALA423 MSE424 SER425 LYS426 LEU427 LYS428

Ligands
Unit 5 CA430 CA431 CL432 PLP900
Unit 6 CA430 CA431 CA432 CL433 PLP900
Unit 7 CA430 CA431 CL432 PLP900
Unit 8 CA430 CA431 CA432 CL433 PLP900

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany