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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE RIBOSOME INACTIVATING PROTEIN PDL1
Keywords PROTEIN, RIBOSOME INACTIVATION, DISULFIDE BOND, GLYCOPROTEIN HYDROLASE, PLANT DEFENSE, PROTEIN SYNTHESIS INHIBITOR, TOXI
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3H5K     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIBOSOME-INACTIVATING PROTEIN PD-L1/PD-L2  A 261 2050 0
2  Protein   RIBOSOME-INACTIVATING PROTEIN PD-L1/PD-L2  B 261 2050 0
3  Ligand   RIBOSOME-INACTIVATING PROTEIN PD-L1/PD-L2  A 2 0 18
4  Ligand   RIBOSOME-INACTIVATING PROTEIN PD-L1/PD-L2  B 2 0 18
5 Water     806 0 806
total       1332 4100 842
Proteins
Unit 1 ILE1 ASN2 THR3 ILE4 THR5 TYR6 ASP7 ALA8 GLY9 ASN10 THR11 THR12 ILE13 ASN14 LYS15 TYR16 ALA17 THR18 PHE19 MET20 GLU21 SER22 LEU23 ARG24 ASN25 GLU26 ALA27 LYS28 ASP29 PRO30 SER31 LEU32 GLN33 CYS34 TYR35 GLY36 ILE37 PRO38 MET39 LEU40 PRO41 ASN42 ASN43 SER44 SER45 THR46 ILE47 LYS48 TYR49 LEU50 LEU51 VAL52 LYS53 LEU54 GLN55 GLY56 ALA57 SER58 GLN59 LYS60 THR61 ILE62 THR63 LEU64 MET65 LEU66 ARG67 ARG68 ASN69 ASN70 LEU71 TYR72 VAL73 MET74 GLY75 TYR76 SER77 ASP78 PRO79 PHE80 ASN81 GLY82 ASN83 CYS84 ARG85 TYR86 HIS87 ILE88 PHE89 ASN90 ASP91 ILE92 THR93 GLY94 THR95 GLU96 ARG97 THR98 ASN99 VAL100 GLU101 ASN102 THR103 LEU104 CYS105 SER106 SER107 SER108 SER109 SER110 ARG111 ASP112 ALA113 LYS114 PRO115 ILE116 ASN117 TYR118 ASN119 SER120 LEU121 TYR122 SER123 THR124 LEU125 GLU126 LYS127 LYS128 ALA129 GLU130 VAL131 ASN132 SER133 ARG134 SER135 GLN136 VAL137 GLN138 LEU139 GLY140 ILE141 GLN142 ILE143 LEU144 SER145 SER146 ASP147 ILE148 GLY149 LYS150 ILE151 SER152 GLY153 GLN154 SER155 SER156 PHE157 THR158 ASP159 LYS160 THR161 GLU162 ALA163 LYS164 PHE165 LEU166 LEU167 VAL168 ALA169 ILE170 GLN171 MET172 VAL173 SER174 GLU175 ALA176 ALA177 ARG178 PHE179 LYS180 TYR181 ILE182 GLU183 ASN184 GLN185 VAL186 LYS187 THR188 ASN189 PHE190 ASN191 ARG192 ASP193 PHE194 SER195 PRO196 ASN197 ASP198 LYS199 ILE200 LEU201 ASP202 LEU203 GLU204 GLU205 ASN206 TRP207 GLY208 LYS209 ILE210 SER211 THR212 ALA213 ILE214 HIS215 ASP216 ALA217 THR218 ASN219 GLY220 ALA221 LEU222 PRO223 LYS224 PRO225 LEU226 GLU227 LEU228 LYS229 ASN230 ALA231 ASP232 GLY233 THR234 LYS235 TRP236 ILE237 VAL238 LEU239 ARG240 VAL241 ASP242 GLU243 ILE244 LYS245 PRO246 ASP247 MET248 GLY249 LEU250 LEU251 ASN252 TYR253 VAL254 ASN255 GLY256 THR257 CYS258 GLN259 THR260 THR261
Unit 2 ILE1 ASN2 THR3 ILE4 THR5 TYR6 ASP7 ALA8 GLY9 ASN10 THR11 THR12 ILE13 ASN14 LYS15 TYR16 ALA17 THR18 PHE19 MET20 GLU21 SER22 LEU23 ARG24 ASN25 GLU26 ALA27 LYS28 ASP29 PRO30 SER31 LEU32 GLN33 CYS34 TYR35 GLY36 ILE37 PRO38 MET39 LEU40 PRO41 ASN42 ASN43 SER44 SER45 THR46 ILE47 LYS48 TYR49 LEU50 LEU51 VAL52 LYS53 LEU54 GLN55 GLY56 ALA57 SER58 GLN59 LYS60 THR61 ILE62 THR63 LEU64 MET65 LEU66 ARG67 ARG68 ASN69 ASN70 LEU71 TYR72 VAL73 MET74 GLY75 TYR76 SER77 ASP78 PRO79 PHE80 ASN81 GLY82 ASN83 CYS84 ARG85 TYR86 HIS87 ILE88 PHE89 ASN90 ASP91 ILE92 THR93 GLY94 THR95 GLU96 ARG97 THR98 ASN99 VAL100 GLU101 ASN102 THR103 LEU104 CYS105 SER106 SER107 SER108 SER109 SER110 ARG111 ASP112 ALA113 LYS114 PRO115 ILE116 ASN117 TYR118 ASN119 SER120 LEU121 TYR122 SER123 THR124 LEU125 GLU126 LYS127 LYS128 ALA129 GLU130 VAL131 ASN132 SER133 ARG134 SER135 GLN136 VAL137 GLN138 LEU139 GLY140 ILE141 GLN142 ILE143 LEU144 SER145 SER146 ASP147 ILE148 GLY149 LYS150 ILE151 SER152 GLY153 GLN154 SER155 SER156 PHE157 THR158 ASP159 LYS160 THR161 GLU162 ALA163 LYS164 PHE165 LEU166 LEU167 VAL168 ALA169 ILE170 GLN171 MET172 VAL173 SER174 GLU175 ALA176 ALA177 ARG178 PHE179 LYS180 TYR181 ILE182 GLU183 ASN184 GLN185 VAL186 LYS187 THR188 ASN189 PHE190 ASN191 ARG192 ASP193 PHE194 SER195 PRO196 ASN197 ASP198 LYS199 ILE200 LEU201 ASP202 LEU203 GLU204 GLU205 ASN206 TRP207 GLY208 LYS209 ILE210 SER211 THR212 ALA213 ILE214 HIS215 ASP216 ALA217 THR218 ASN219 GLY220 ALA221 LEU222 PRO223 LYS224 PRO225 LEU226 GLU227 LEU228 LYS229 ASN230 ALA231 ASP232 GLY233 THR234 LYS235 TRP236 ILE237 VAL238 LEU239 ARG240 VAL241 ASP242 GLU243 ILE244 LYS245 PRO246 ASP247 MET248 GLY249 LEU250 LEU251 ASN252 TYR253 VAL254 ASN255 GLY256 THR257 CYS258 GLN259 THR260 THR261
Ligands
Unit 3 NAG263 EDO264
Unit 4 NAG262 EDO265
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany