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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN SPLICEOSOMAL U1 SNRNP
Keywords PRE-MRNA SPLICING, SPLICEOSOME, RNA-BINDING DOMAIN, SM FOLD, FINGER, RNA RECOGNITION MOTIF, 5' SPLICE SITE, SPLICING
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3CW1     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    V 138 138 0
2  DNA    v 138 138 0
3  DNA    w 138 138 0
4  DNA    x 138 138 0
5  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3  D 76 76 0
6  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEI B  A 64 64 0
7  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1  B 77 77 0
8  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2  C 88 88 0
9  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN F  F 76 76 0
10  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN E  E 75 75 0
11  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN G  G 73 73 0
12  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA  K 120 120 0
13  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  L 57 57 0
14  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3  S 76 76 0
15  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEI B  H 64 64 0
16  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1  M 77 77 0
17  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2  P 86 86 0
18  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN F  Z 70 70 0
19  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN E  W 75 75 0
20  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN G  3 73 73 0
21  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA  6 120 120 0
22  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  9 58 58 0
23  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3  T 76 76 0
24  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEI B  I 63 63 0
25  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1  N 76 76 0
26  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2  Q 89 89 0
27  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN F  1 75 75 0
28  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN E  X 75 75 0
29  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN G  4 73 73 0
30  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA  7 120 120 0
31  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  0 54 54 0
32  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3  U 76 76 0
33  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEI B  J 63 63 0
34  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1  O 77 77 0
35  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2  R 85 85 0
36  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN F  2 76 76 0
37  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN E  Y 75 75 0
38  Protein   SMALL NUCLEAR RIBONUCLEOPROTEIN G  5 73 73 0
39  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA  8 120 120 0
40  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  l 58 58 0
41  Ligand   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  L 1 0 1
42  Ligand   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  9 1 0 1
43  Ligand   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  0 1 0 1
44  Ligand   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C  l 1 0 1
total       3365 3361 4
Proteins
Unit 5 PRO6 ILE7 LYS8 VAL9 LEU10 HIS11 GLU12 ALA13 GLU14 GLY15 HIS16 ILE17 VAL18 THR19 CYS20 GLU21 THR22 ASN23 THR24 GLY25 GLU26 VAL27 TYR28 ARG29 GLY30 LYS31 LEU32 ILE33 GLU34 ALA35 GLU36 ASP37 ASN38 MET39 ASN40 CYS41 GLN42 MET43 SER44 ASN45 ILE46 THR47 VAL48 THR49 TYR50 ARG51 ASP52 GLY53 ARG54 VAL55 ALA56 GLN57 LEU58 GLU59 GLN60 VAL61 TYR62 ILE63 ARG64 GLY65 CYS66 LYS67 ILE68 ARG69 PHE70 LEU71 ILE72 LEU73 PRO74 ASP75 MET76 LEU77 LYS78 ASN79 ALA80 PRO81
Unit 6 SER7 LYS8 MET9 LEU10 GLN11 HIS12 ILE13 ASP14 TYR15 ARG16 MET17 ARG18 CYS19 ILE20 LEU21 GLN22 ASP23 GLY24 ARG25 ILE26 PHE27 ILE28 GLY29 THR30 PHE31 LYS32 ALA33 PHE34 ASP35 LYS36 HIS37 MET38 ASN39 LEU40 ILE41 LEU42 CYS43 ASP44 CYS45 ASP46 GLU47 ARG65 VAL66 LEU67 GLY68 LEU69 VAL70 LEU71 LEU72 ARG73 GLY74 GLU75 ASN76 LEU77 VAL78 SER79 MET80 THR81 VAL82 GLU83 GLY84 PRO85 PRO86 PRO87
Unit 7 LYS2 LEU3 VAL4 ARG5 PHE6 LEU7 MET8 LYS9 LEU10 SER11 HIS12 GLU13 THR14 VAL15 THR16 ILE17 GLU18 LEU19 LYS20 ASN21 GLY22 THR23 GLN24 VAL25 HIS26 GLY27 THR28 ILE29 THR30 GLY31 VAL32 ASP33 VAL34 SER35 MET36 ASN37 THR38 HIS39 LEU40 LYS41 ALA42 VAL43 LYS44 MET45 THR46 LEU47 LYS48 ASN49 ARG50 GLU51 PRO52 VAL53 GLN54 LEU55 GLU56 THR57 LEU58 SER59 ILE60 ARG61 GLY62 ASN63 ASN64 ILE65 ARG66 TYR67 PHE68 ILE69 LEU70 PRO71 ASP72 SER73 LEU74 PRO75 LEU76 ASP77 THR78
Unit 8 MET11 THR12 PRO13 GLU14 GLU15 LEU16 GLN17 LYS18 ARG19 GLU20 GLU21 GLU22 GLU23 PHE24 ASN25 THR26 GLY27 PRO28 LEU29 SER30 VAL31 LEU32 THR33 GLN34 SER35 VAL36 LYS37 ASN38 ASN39 THR40 GLN41 VAL42 LEU43 ILE44 ASN45 CYS46 ARG47 ASN48 ASN49 LYS50 LYS51 LEU52 LEU53 GLY54 ARG55 VAL56 LYS57 ALA58 PHE59 ASP60 ARG61 HIS62 CYS63 ASN64 MET65 VAL66 LEU67 GLU68 ASN69 VAL70 LYS71 GLU72 MET73 TRP74 THR75 LYS92 ASP93 ARG94 TYR95 ILE96 SER97 LYS98 MET99 PHE100 LEU101 ARG102 GLY103 ASP104 SER105 VAL106 ILE107 VAL108 VAL109 LEU110 ARG111 ASN112 PRO113 LEU114
Unit 9 ASN6 PRO7 LYS8 PRO9 PHE10 LEU11 ASN12 GLY13 LEU14 THR15 GLY16 LYS17 PRO18 VAL19 MET20 VAL21 LYS22 LEU23 LYS24 TRP25 GLY26 MET27 GLU28 TYR29 LYS30 GLY31 TYR32 LEU33 VAL34 SER35 VAL36 ASP37 GLY38 TYR39 MET40 ASN41 MET42 GLN43 LEU44 ALA45 ASN46 THR47 GLU48 GLU49 TYR50 ILE51 ASP52 GLY53 ALA54 LEU55 SER56 GLY57 HIS58 LEU59 GLY60 GLU61 VAL62 LEU63 ILE64 ARG65 CYS66 ASN67 ASN68 VAL69 LEU70 TYR71 ILE72 ARG73 GLY74 VAL75 GLU76 GLU77 GLU78 GLU79 GLU80 ASP81
Unit 10 ILE18 ASN19 LEU20 ILE21 PHE22 ARG23 TYR24 LEU25 GLN26 ASN27 ARG28 SER29 ARG30 ILE31 GLN32 VAL33 TRP34 LEU35 TYR36 GLU37 GLN38 VAL39 ASN40 MET41 ARG42 ILE43 GLU44 GLY45 CYS46 ILE47 ILE48 GLY49 PHE50 ASP51 GLU52 TYR53 MET54 ASN55 LEU56 VAL57 LEU58 ASP59 ASP60 ALA61 GLU62 GLU63 ILE64 HIS65 SER66 LYS67 THR68 LYS69 SER70 ARG71 LYS72 GLN73 LEU74 GLY75 ARG76 ILE77 MET78 LEU79 LYS80 GLY81 ASP82 ASN83 ILE84 THR85 LEU86 LEU87 GLN88 SER89 VAL90 SER91 ASN92
Unit 11 ALA4 HIS5 PRO6 PRO7 GLU8 LEU9 LYS10 LYS11 PHE12 MET13 ASP14 LYS15 LYS16 LEU17 SER18 LEU19 LYS20 LEU21 ASN22 GLY23 GLY24 ARG25 HIS26 VAL27 GLN28 GLY29 ILE30 LEU31 ARG32 GLY33 PHE34 ASP35 PRO36 PHE37 MET38 ASN39 LEU40 VAL41 ILE42 ASP43 GLU44 CYS45 VAL46 GLU47 MET48 ALA49 THR50 SER51 GLY52 GLN53 GLN54 ASN55 ASN56 ILE57 GLY58 MET59 VAL60 VAL61 ILE62 ARG63 GLY64 ASN65 SER66 ILE67 ILE68 MET69 LEU70 GLU71 ALA72 LEU73 GLU74 ARG75 VAL76
Unit 12 LEU9 LEU10 ALA11 LEU12 PHE13 ALA14 PRO15 ARG16 ASP17 PRO18 ILE19 PRO20 TYR21 LEU22 PRO23 ARG63 GLU64 GLU65 ARG66 MET67 GLU68 ARG69 LYS70 ARG71 ARG72 GLU73 LYS74 ILE75 GLU76 ARG77 ARG78 GLN79 GLN80 GLU81 VAL82 GLU83 THR84 GLU85 LEU86 LYS87 MET88 TRP89 LYS103 THR104 LEU105 PHE106 VAL107 ALA108 ARG109 VAL110 ASN111 TYR112 ASP113 THR114 THR115 GLU116 SER117 LYS118 LEU119 ARG120 ARG121 GLU122 PHE123 GLU124 VAL125 TYR126 GLY127 PRO128 ILE129 LYS130 ARG131 ILE132 HIS133 MET134 VAL135 TYR136 SER137 LYS138 ARG139 SER140 GLY141 LYS142 PRO143 ARG144 GLY145 TYR146 ALA147 PHE148 ILE149 GLU150 TYR151 GLU152 HIS153 GLU154 ARG155 ASP156 MET157 HIS158 SER159 ALA160 TYR161 LYS162 HIS163 ALA164 ASP165 GLY166 LYS167 LYS168 ILE169 ASP170 GLY171 ARG172 ARG173 VAL174 LEU175 VAL176 ASP177 VAL178 GLU179 ARG180
Unit 13 PHE4 TYR5 CYS6 ASP7 TYR8 CYS9 ASP10 THR11 TYR12 LEU13 THR14 HIS15 ASP16 SER17 PRO18 SER19 VAL20 ARG21 LYS22 THR23 HIS24 CYS25 SER26 GLY27 ARG28 LYS29 HIS30 LYS31 GLU32 ASN33 VAL34 LYS35 ASP36 TYR37 TYR38 CYS39 LYS40 TRP41 MET42 GLU43 GLU44 GLN45 ALA46 GLN47 SER48 LEU49 ILE50 ASP51 LYS52 THR53 THR54 ALA55 ALA56 PHE57 GLN58 GLN59 GLY60
Unit 14 PRO206 ILE207 LYS208 VAL209 LEU210 HIS211 GLU212 ALA213 GLU214 GLY215 HIS216 ILE217 VAL218 THR219 CYS220 GLU221 THR222 ASN223 THR224 GLY225 GLU226 VAL227 TYR228 ARG229 GLY230 LYS231 LEU232 ILE233 GLU234 ALA235 GLU236 ASP237 ASN238 MET239 ASN240 CYS241 GLN242 MET243 SER244 ASN245 ILE246 THR247 VAL248 THR249 TYR250 ARG251 ASP252 GLY253 ARG254 VAL255 ALA256 GLN257 LEU258 GLU259 GLN260 VAL261 TYR262 ILE263 ARG264 GLY265 CYS266 LYS267 ILE268 ARG269 PHE270 LEU271 ILE272 LEU273 PRO274 ASP275 MET276 LEU277 LYS278 ASN279 ALA280 PRO281
Unit 15 SER207 LYS208 MET209 LEU210 GLN211 HIS212 ILE213 ASP214 TYR215 ARG216 MET217 ARG218 CYS219 ILE220 LEU221 GLN222 ASP223 GLY224 ARG225 ILE226 PHE227 ILE228 GLY229 THR230 PHE231 LYS232 ALA233 PHE234 ASP235 LYS236 HIS237 MET238 ASN239 LEU240 ILE241 LEU242 CYS243 ASP244 CYS245 ASP246 GLU247 ARG265 VAL266 LEU267 GLY268 LEU269 VAL270 LEU271 LEU272 ARG273 GLY274 GLU275 ASN276 LEU277 VAL278 SER279 MET280 THR281 VAL282 GLU283 GLY284 PRO285 PRO286 PRO287
Unit 16 LYS202 LEU203 VAL204 ARG205 PHE206 LEU207 MET208 LYS209 LEU210 SER211 HIS212 GLU213 THR214 VAL215 THR216 ILE217 GLU218 LEU219 LYS220 ASN221 GLY222 THR223 GLN224 VAL225 HIS226 GLY227 THR228 ILE229 THR230 GLY231 VAL232 ASP233 VAL234 SER235 MET236 ASN237 THR238 HIS239 LEU240 LYS241 ALA242 VAL243 LYS244 MET245 THR246 LEU247 LYS248 ASN249 ARG250 GLU251 PRO252 VAL253 GLN254 LEU255 GLU256 THR257 LEU258 SER259 ILE260 ARG261 GLY262 ASN263 ASN264 ILE265 ARG266 TYR267 PHE268 ILE269 LEU270 PRO271 ASP272 SER273 LEU274 PRO275 LEU276 ASP277 THR278
Unit 17 MET211 THR212 PRO213 GLU214 GLU215 LEU216 GLN217 LYS218 ARG219 GLU220 GLU221 GLU222 GLU223 PHE224 ASN225 THR226 GLY227 PRO228 LEU229 SER230 VAL231 LEU232 THR233 GLN234 SER235 VAL236 LYS237 ASN238 ASN239 THR240 GLN241 VAL242 LEU243 ILE244 ASN245 CYS246 ARG247 ASN248 ASN249 LYS250 LYS251 LEU252 LEU253 GLY254 ARG255 VAL256 LYS257 ALA258 PHE259 ASP260 ARG261 HIS262 CYS263 ASN264 MET265 VAL266 LEU267 GLU268 ASN269 VAL270 LYS271 GLU272 MET273 TRP274 THR275 LYS292 ASP293 ARG294 TYR295 ILE296 SER297 LYS298 MET299 PHE300 LEU301 ARG302 GLY303 ASP304 SER305 VAL306 ILE307 VAL308 VAL309 LEU310 ARG311 ASN312
Unit 18 ASN206 PRO207 LYS208 PRO209 PHE210 LEU211 ASN212 GLY213 LEU214 THR215 GLY216 LYS217 PRO218 VAL219 MET220 VAL221 LYS222 LEU223 LYS224 TRP225 GLY226 MET227 GLU228 TYR229 LYS230 GLY231 TYR232 LEU233 VAL234 SER235 VAL236 ASP237 GLY238 TYR239 MET240 ASN241 MET242 GLN243 LEU244 ALA245 ASN246 THR247 GLU248 GLU249 TYR250 ILE251 ASP252 GLY253 ALA254 LEU255 SER256 GLY257 HIS258 LEU259 GLY260 GLU261 VAL262 LEU263 ILE264 ARG265 CYS266 ASN267 ASN268 VAL269 LEU270 TYR271 ILE272 ARG273 GLY274 VAL275
Unit 19 ILE218 ASN219 LEU220 ILE221 PHE222 ARG223 TYR224 LEU225 GLN226 ASN227 ARG228 SER229 ARG230 ILE231 GLN232 VAL233 TRP234 LEU235 TYR236 GLU237 GLN238 VAL239 ASN240 MET241 ARG242 ILE243 GLU244 GLY245 CYS246 ILE247 ILE248 GLY249 PHE250 ASP251 GLU252 TYR253 MET254 ASN255 LEU256 VAL257 LEU258 ASP259 ASP260 ALA261 GLU262 GLU263 ILE264 HIS265 SER266 LYS267 THR268 LYS269 SER270 ARG271 LYS272 GLN273 LEU274 GLY275 ARG276 ILE277 MET278 LEU279 LYS280 GLY281 ASP282 ASN283 ILE284 THR285 LEU286 LEU287 GLN288 SER289 VAL290 SER291 ASN292
Unit 20 ALA204 HIS205 PRO206 PRO207 GLU208 LEU209 LYS210 LYS211 PHE212 MET213 ASP214 LYS215 LYS216 LEU217 SER218 LEU219 LYS220 LEU221 ASN222 GLY223 GLY224 ARG225 HIS226 VAL227 GLN228 GLY229 ILE230 LEU231 ARG232 GLY233 PHE234 ASP235 PRO236 PHE237 MET238 ASN239 LEU240 VAL241 ILE242 ASP243 GLU244 CYS245 VAL246 GLU247 MET248 ALA249 THR250 SER251 GLY252 GLN253 GLN254 ASN255 ASN256 ILE257 GLY258 MET259 VAL260 VAL261 ILE262 ARG263 GLY264 ASN265 SER266 ILE267 ILE268 MET269 LEU270 GLU271 ALA272 LEU273 GLU274 ARG275 VAL276
Unit 21 LEU209 LEU210 ALA211 LEU212 PHE213 ALA214 PRO215 ARG216 ASP217 PRO218 ILE219 PRO220 TYR221 LEU222 PRO223 ARG263 GLU264 GLU265 ARG266 MET267 GLU268 ARG269 LYS270 ARG271 ARG272 GLU273 LYS274 ILE275 GLU276 ARG277 ARG278 GLN279 GLN280 GLU281 VAL282 GLU283 THR284 GLU285 LEU286 LYS287 MET288 TRP289 LYS303 THR304 LEU305 PHE306 VAL307 ALA308 ARG309 VAL310 ASN311 TYR312 ASP313 THR314 THR315 GLU316 SER317 LYS318 LEU319 ARG320 ARG321 GLU322 PHE323 GLU324 VAL325 TYR326 GLY327 PRO328 ILE329 LYS330 ARG331 ILE332 HIS333 MET334 VAL335 TYR336 SER337 LYS338 ARG339 SER340 GLY341 LYS342 PRO343 ARG344 GLY345 TYR346 ALA347 PHE348 ILE349 GLU350 TYR351 GLU352 HIS353 GLU354 ARG355 ASP356 MET357 HIS358 SER359 ALA360 TYR361 LYS362 HIS363 ALA364 ASP365 GLY366 LYS367 LYS368 ILE369 ASP370 GLY371 ARG372 ARG373 VAL374 LEU375 VAL376 ASP377 VAL378 GLU379 ARG380
Unit 22 PHE204 TYR205 CYS206 ASP207 TYR208 CYS209 ASP210 THR211 TYR212 LEU213 THR214 HIS215 ASP216 SER217 PRO218 SER219 VAL220 ARG221 LYS222 THR223 HIS224 CYS225 SER226 GLY227 ARG228 LYS229 HIS230 LYS231 GLU232 ASN233 VAL234 LYS235 ASP236 TYR237 TYR238 CYS239 LYS240 TRP241 MET242 GLU243 GLU244 GLN245 ALA246 GLN247 SER248 LEU249 ILE250 ASP251 LYS252 THR253 THR254 ALA255 ALA256 PHE257 GLN258 GLN259 GLY260 LYS261
Unit 23 PRO406 ILE407 LYS408 VAL409 LEU410 HIS411 GLU412 ALA413 GLU414 GLY415 HIS416 ILE417 VAL418 THR419 CYS420 GLU421 THR422 ASN423 THR424 GLY425 GLU426 VAL427 TYR428 ARG429 GLY430 LYS431 LEU432 ILE433 GLU434 ALA435 GLU436 ASP437 ASN438 MET439 ASN440 CYS441 GLN442 MET443 SER444 ASN445 ILE446 THR447 VAL448 THR449 TYR450 ARG451 ASP452 GLY453 ARG454 VAL455 ALA456 GLN457 LEU458 GLU459 GLN460 VAL461 TYR462 ILE463 ARG464 GLY465 CYS466 LYS467 ILE468 ARG469 PHE470 LEU471 ILE472 LEU473 PRO474 ASP475 MET476 LEU477 LYS478 ASN479 ALA480 PRO481
Unit 24 LYS407 MET408 LEU409 GLN410 HIS411 ILE412 ASP413 TYR414 ARG415 MET416 ARG417 CYS418 ILE419 LEU420 GLN421 ASP422 GLY423 ARG424 ILE425 PHE426 ILE427 GLY428 THR429 PHE430 LYS431 ALA432 PHE433 ASP434 LYS435 HIS436 MET437 ASN438 LEU439 ILE440 LEU441 CYS442 ASP443 CYS444 ASP445 GLU446 ARG465 VAL466 LEU467 GLY468 LEU469 VAL470 LEU471 LEU472 ARG473 GLY474 GLU475 ASN476 LEU477 VAL478 SER479 MET480 THR481 VAL482 GLU483 GLY484 PRO485 PRO486 PRO487
Unit 25 LYS402 LEU403 VAL404 ARG405 PHE406 LEU407 MET408 LYS409 LEU410 SER411 HIS412 GLU413 THR414 VAL415 THR416 ILE417 GLU418 LEU419 LYS420 ASN421 GLY422 THR423 GLN424 VAL425 HIS426 GLY427 THR428 ILE429 THR430 GLY431 VAL432 ASP433 VAL434 SER435 MET436 ASN437 THR438 HIS439 LEU440 LYS441 ALA442 VAL443 LYS444 MET445 THR446 LEU447 LYS448 ASN449 ARG450 GLU451 PRO452 VAL453 GLN454 LEU455 GLU456 THR457 LEU458 SER459 ILE460 ARG461 GLY462 ASN463 ASN464 ILE465 ARG466 TYR467 PHE468 ILE469 LEU470 PRO471 ASP472 SER473 LEU474 PRO475 LEU476 ASP477
Unit 26 MET411 THR412 PRO413 GLU414 GLU415 LEU416 GLN417 LYS418 ARG419 GLU420 GLU421 GLU422 GLU423 PHE424 ASN425 THR426 GLY427 PRO428 LEU429 SER430 VAL431 LEU432 THR433 GLN434 SER435 VAL436 LYS437 ASN438 ASN439 THR440 GLN441 VAL442 LEU443 ILE444 ASN445 CYS446 ARG447 ASN448 ASN449 LYS450 LYS451 LEU452 LEU453 GLY454 ARG455 VAL456 LYS457 ALA458 PHE459 ASP460 ARG461 HIS462 CYS463 ASN464 MET465 VAL466 LEU467 GLU468 ASN469 VAL470 LYS471 GLU472 MET473 TRP474 THR475 GLU476 LYS492 ASP493 ARG494 TYR495 ILE496 SER497 LYS498 MET499 PHE500 LEU501 ARG502 GLY503 ASP504 SER505 VAL506 ILE507 VAL508 VAL509 LEU510 ARG511 ASN512 PRO513 LEU514
Unit 27 PRO407 LYS408 PRO409 PHE410 LEU411 ASN412 GLY413 LEU414 THR415 GLY416 LYS417 PRO418 VAL419 MET420 VAL421 LYS422 LEU423 LYS424 TRP425 GLY426 MET427 GLU428 TYR429 LYS430 GLY431 TYR432 LEU433 VAL434 SER435 VAL436 ASP437 GLY438 TYR439 MET440 ASN441 MET442 GLN443 LEU444 ALA445 ASN446 THR447 GLU448 GLU449 TYR450 ILE451 ASP452 GLY453 ALA454 LEU455 SER456 GLY457 HIS458 LEU459 GLY460 GLU461 VAL462 LEU463 ILE464 ARG465 CYS466 ASN467 ASN468 VAL469 LEU470 TYR471 ILE472 ARG473 GLY474 VAL475 GLU476 GLU477 GLU478 GLU479 GLU480 ASP481
Unit 28 ILE418 ASN419 LEU420 ILE421 PHE422 ARG423 TYR424 LEU425 GLN426 ASN427 ARG428 SER429 ARG430 ILE431 GLN432 VAL433 TRP434 LEU435 TYR436 GLU437 GLN438 VAL439 ASN440 MET441 ARG442 ILE443 GLU444 GLY445 CYS446 ILE447 ILE448 GLY449 PHE450 ASP451 GLU452 TYR453 MET454 ASN455 LEU456 VAL457 LEU458 ASP459 ASP460 ALA461 GLU462 GLU463 ILE464 HIS465 SER466 LYS467 THR468 LYS469 SER470 ARG471 LYS472 GLN473 LEU474 GLY475 ARG476 ILE477 MET478 LEU479 LYS480 GLY481 ASP482 ASN483 ILE484 THR485 LEU486 LEU487 GLN488 SER489 VAL490 SER491 ASN492
Unit 29 ALA404 HIS405 PRO406 PRO407 GLU408 LEU409 LYS410 LYS411 PHE412 MET413 ASP414 LYS415 LYS416 LEU417 SER418 LEU419 LYS420 LEU421 ASN422 GLY423 GLY424 ARG425 HIS426 VAL427 GLN428 GLY429 ILE430 LEU431 ARG432 GLY433 PHE434 ASP435 PRO436 PHE437 MET438 ASN439 LEU440 VAL441 ILE442 ASP443 GLU444 CYS445 VAL446 GLU447 MET448 ALA449 THR450 SER451 GLY452 GLN453 GLN454 ASN455 ASN456 ILE457 GLY458 MET459 VAL460 VAL461 ILE462 ARG463 GLY464 ASN465 SER466 ILE467 ILE468 MET469 LEU470 GLU471 ALA472 LEU473 GLU474 ARG475 VAL476
Unit 30 LEU409 LEU410 ALA411 LEU412 PHE413 ALA414 PRO415 ARG416 ASP417 PRO418 ILE419 PRO420 TYR421 LEU422 PRO423 ARG463 GLU464 GLU465 ARG466 MET467 GLU468 ARG469 LYS470 ARG471 ARG472 GLU473 LYS474 ILE475 GLU476 ARG477 ARG478 GLN479 GLN480 GLU481 VAL482 GLU483 THR484 GLU485 LEU486 LYS487 MET488 TRP489 LYS503 THR504 LEU505 PHE506 VAL507 ALA508 ARG509 VAL510 ASN511 TYR512 ASP513 THR514 THR515 GLU516 SER517 LYS518 LEU519 ARG520 ARG521 GLU522 PHE523 GLU524 VAL525 TYR526 GLY527 PRO528 ILE529 LYS530 ARG531 ILE532 HIS533 MET534 VAL535 TYR536 SER537 LYS538 ARG539 SER540 GLY541 LYS542 PRO543 ARG544 GLY545 TYR546 ALA547 PHE548 ILE549 GLU550 TYR551 GLU552 HIS553 GLU554 ARG555 ASP556 MET557 HIS558 SER559 ALA560 TYR561 LYS562 HIS563 ALA564 ASP565 GLY566 LYS567 LYS568 ILE569 ASP570 GLY571 ARG572 ARG573 VAL574 LEU575 VAL576 ASP577 VAL578 GLU579 ARG580
Unit 31 PHE404 TYR405 CYS406 ASP407 TYR408 CYS409 ASP410 THR411 TYR412 LEU413 THR414 HIS415 ASP416 SER417 PRO418 SER419 VAL420 ARG421 LYS422 THR423 HIS424 CYS425 SER426 GLY427 ARG428 LYS429 HIS430 LYS431 GLU432 ASN433 VAL434 LYS435 ASP436 TYR437 TYR438 CYS439 LYS440 TRP441 MET442 GLU443 GLU444 GLN445 ALA446 GLN447 SER448 LEU449 ILE450 ASP451 LYS452 THR453 THR454 ALA455 ALA456 PHE457
Unit 32 PRO606 ILE607 LYS608 VAL609 LEU610 HIS611 GLU612 ALA613 GLU614 GLY615 HIS616 ILE617 VAL618 THR619 CYS620 GLU621 THR622 ASN623 THR624 GLY625 GLU626 VAL627 TYR628 ARG629 GLY630 LYS631 LEU632 ILE633 GLU634 ALA635 GLU636 ASP637 ASN638 MET639 ASN640 CYS641 GLN642 MET643 SER644 ASN645 ILE646 THR647 VAL648 THR649 TYR650 ARG651 ASP652 GLY653 ARG654 VAL655 ALA656 GLN657 LEU658 GLU659 GLN660 VAL661 TYR662 ILE663 ARG664 GLY665 CYS666 LYS667 ILE668 ARG669 PHE670 LEU671 ILE672 LEU673 PRO674 ASP675 MET676 LEU677 LYS678 ASN679 ALA680 PRO681
Unit 33 SER607 LYS608 MET609 LEU610 GLN611 HIS612 ILE613 ASP614 TYR615 ARG616 MET617 ARG618 CYS619 ILE620 LEU621 GLN622 ASP623 GLY624 ARG625 ILE626 PHE627 ILE628 GLY629 THR630 PHE631 LYS632 ALA633 PHE634 ASP635 LYS636 HIS637 MET638 ASN639 LEU640 ILE641 LEU642 CYS643 ASP644 CYS645 ASP646 GLU647 ARG665 VAL666 LEU667 GLY668 LEU669 VAL670 LEU671 LEU672 ARG673 GLY674 GLU675 ASN676 LEU677 VAL678 SER679 MET680 THR681 VAL682 GLU683 GLY684 PRO685 PRO686
Unit 34 LYS602 LEU603 VAL604 ARG605 PHE606 LEU607 MET608 LYS609 LEU610 SER611 HIS612 GLU613 THR614 VAL615 THR616 ILE617 GLU618 LEU619 LYS620 ASN621 GLY622 THR623 GLN624 VAL625 HIS626 GLY627 THR628 ILE629 THR630 GLY631 VAL632 ASP633 VAL634 SER635 MET636 ASN637 THR638 HIS639 LEU640 LYS641 ALA642 VAL643 LYS644 MET645 THR646 LEU647 LYS648 ASN649 ARG650 GLU651 PRO652 VAL653 GLN654 LEU655 GLU656 THR657 LEU658 SER659 ILE660 ARG661 GLY662 ASN663 ASN664 ILE665 ARG666 TYR667 PHE668 ILE669 LEU670 PRO671 ASP672 SER673 LEU674 PRO675 LEU676 ASP677 THR678
Unit 35 MET611 THR612 PRO613 GLU614 GLU615 LEU616 GLN617 LYS618 ARG619 GLU620 GLU621 GLU622 GLU623 PHE624 ASN625 THR626 GLY627 PRO628 LEU629 SER630 VAL631 LEU632 THR633 GLN634 SER635 VAL636 LYS637 ASN638 ASN639 THR640 GLN641 VAL642 LEU643 ILE644 ASN645 CYS646 ARG647 ASN648 ASN649 LYS650 LYS651 LEU652 LEU653 GLY654 ARG655 VAL656 LYS657 ALA658 PHE659 ASP660 ARG661 HIS662 CYS663 ASN664 MET665 VAL666 LEU667 GLU668 ASN669 VAL670 LYS671 GLU672 MET673 LYS692 ASP693 ARG694 TYR695 ILE696 SER697 LYS698 MET699 PHE700 LEU701 ARG702 GLY703 ASP704 SER705 VAL706 ILE707 VAL708 VAL709 LEU710 ARG711 ASN712 PRO713
Unit 36 ASN606 PRO607 LYS608 PRO609 PHE610 LEU611 ASN612 GLY613 LEU614 THR615 GLY616 LYS617 PRO618 VAL619 MET620 VAL621 LYS622 LEU623 LYS624 TRP625 GLY626 MET627 GLU628 TYR629 LYS630 GLY631 TYR632 LEU633 VAL634 SER635 VAL636 ASP637 GLY638 TYR639 MET640 ASN641 MET642 GLN643 LEU644 ALA645 ASN646 THR647 GLU648 GLU649 TYR650 ILE651 ASP652 GLY653 ALA654 LEU655 SER656 GLY657 HIS658 LEU659 GLY660 GLU661 VAL662 LEU663 ILE664 ARG665 CYS666 ASN667 ASN668 VAL669 LEU670 TYR671 ILE672 ARG673 GLY674 VAL675 GLU676 GLU677 GLU678 GLU679 GLU680 ASP681
Unit 37 ILE618 ASN619 LEU620 ILE621 PHE622 ARG623 TYR624 LEU625 GLN626 ASN627 ARG628 SER629 ARG630 ILE631 GLN632 VAL633 TRP634 LEU635 TYR636 GLU637 GLN638 VAL639 ASN640 MET641 ARG642 ILE643 GLU644 GLY645 CYS646 ILE647 ILE648 GLY649 PHE650 ASP651 GLU652 TYR653 MET654 ASN655 LEU656 VAL657 LEU658 ASP659 ASP660 ALA661 GLU662 GLU663 ILE664 HIS665 SER666 LYS667 THR668 LYS669 SER670 ARG671 LYS672 GLN673 LEU674 GLY675 ARG676 ILE677 MET678 LEU679 LYS680 GLY681 ASP682 ASN683 ILE684 THR685 LEU686 LEU687 GLN688 SER689 VAL690 SER691 ASN692
Unit 38 ALA604 HIS605 PRO606 PRO607 GLU608 LEU609 LYS610 LYS611 PHE612 MET613 ASP614 LYS615 LYS616 LEU617 SER618 LEU619 LYS620 LEU621 ASN622 GLY623 GLY624 ARG625 HIS626 VAL627 GLN628 GLY629 ILE630 LEU631 ARG632 GLY633 PHE634 ASP635 PRO636 PHE637 MET638 ASN639 LEU640 VAL641 ILE642 ASP643 GLU644 CYS645 VAL646 GLU647 MET648 ALA649 THR650 SER651 GLY652 GLN653 GLN654 ASN655 ASN656 ILE657 GLY658 MET659 VAL660 VAL661 ILE662 ARG663 GLY664 ASN665 SER666 ILE667 ILE668 MET669 LEU670 GLU671 ALA672 LEU673 GLU674 ARG675 VAL676
Unit 39 LEU609 LEU610 ALA611 LEU612 PHE613 ALA614 PRO615 ARG616 ASP617 PRO618 ILE619 PRO620 TYR621 LEU622 PRO623 ARG663 GLU664 GLU665 ARG666 MET667 GLU668 ARG669 LYS670 ARG671 ARG672 GLU673 LYS674 ILE675 GLU676 ARG677 ARG678 GLN679 GLN680 GLU681 VAL682 GLU683 THR684 GLU685 LEU686 LYS687 MET688 TRP689 LYS703 THR704 LEU705 PHE706 VAL707 ALA708 ARG709 VAL710 ASN711 TYR712 ASP713 THR714 THR715 GLU716 SER717 LYS718 LEU719 ARG720 ARG721 GLU722 PHE723 GLU724 VAL725 TYR726 GLY727 PRO728 ILE729 LYS730 ARG731 ILE732 HIS733 MET734 VAL735 TYR736 SER737 LYS738 ARG739 SER740 GLY741 LYS742 PRO743 ARG744 GLY745 TYR746 ALA747 PHE748 ILE749 GLU750 TYR751 GLU752 HIS753 GLU754 ARG755 ASP756 MET757 HIS758 SER759 ALA760 TYR761 LYS762 HIS763 ALA764 ASP765 GLY766 LYS767 LYS768 ILE769 ASP770 GLY771 ARG772 ARG773 VAL774 LEU775 VAL776 ASP777 VAL778 GLU779 ARG780
Unit 40 PHE604 TYR605 CYS606 ASP607 TYR608 CYS609 ASP610 THR611 TYR612 LEU613 THR614 HIS615 ASP616 SER617 PRO618 SER619 VAL620 ARG621 LYS622 THR623 HIS624 CYS625 SER626 GLY627 ARG628 LYS629 HIS630 LYS631 GLU632 ASN633 VAL634 LYS635 ASP636 TYR637 TYR638 CYS639 LYS640 TRP641 MET642 GLU643 GLU644 GLN645 ALA646 GLN647 SER648 LEU649 ILE650 ASP651 LYS652 THR653 THR654 ALA655 ALA656 PHE657 GLN658 GLN659 GLY660 LYS661
Nucleic acids
Unit 1 A1 U2 A3 C4 U5 U6 A7 C8 C9 U10 G11 G12 C13 A14 G15 G16 G17 G18 A19 G20 A21 U22 A23 C24 C25 A26 U27 G28 A29 U30 C31 A32 C33 G34 A35 A36 G37 G38 U39 G40 G41 U42 U43 U44 U45 C46 C47 C48 A49 G50 G51 G52 G53 A54 G55 A56 C83 G84 U85 C86 C87 C88 C89 U90 G91 C92 G93 A94 U95 U96 U97 C98 C99 C100 C101 A102 A103 A104 U105 G106 U107 G108 G109 G110 A111 A112 A113 C114 U115 C116 G117 A118 C119 U120 G121 C122 A123 U124 A125 A126 U127 U128 U129 G130 U131 G132 G133 U134 A135 G136 U137 G138 G139 G140 G141 G142 A143 C144 U145 G146 C147 G148 U149 U150 C151 G152 C153 G154 C155 U156 U157 U158 C159 C160 C161 C162 U163 G164
Unit 2 A201 U202 A203 C204 U205 U206 A207 C208 C209 U210 G211 G212 C213 A214 G215 G216 G217 G218 A219 G220 A221 U222 A223 C224 C225 A226 U227 G228 A229 U230 C231 A232 C233 G234 A235 A236 G237 G238 U239 G240 G241 U242 U243 U244 U245 C246 C247 C248 A249 G250 G251 G252 G253 A254 G255 A256 C283 G284 U285 C286 C287 C288 C289 U290 G291 C292 G293 A294 U295 U296 U297 C298 C299 C300 C301 A302 A303 A304 U305 G306 U307 G308 G309 G310 A311 A312 A313 C314 U315 C316 G317 A318 C319 U320 G321 C322 A323 U324 A325 A326 U327 U328 U329 G330 U331 G332 G333 U334 A335 G336 U337 G338 G339 G340 G341 G342 A343 C344 U345 G346 C347 G348 U349 U350 C351 G352 C353 G354 C355 U356 U357 U358 C359 C360 C361 C362 U363 G364
Unit 3 A401 U402 A403 C404 U405 U406 A407 C408 C409 U410 G411 G412 C413 A414 G415 G416 G417 G418 A419 G420 A421 U422 A423 C424 C425 A426 U427 G428 A429 U430 C431 A432 C433 G434 A435 A436 G437 G438 U439 G440 G441 U442 U443 U444 U445 C446 C447 C448 A449 G450 G451 G452 G453 A454 G455 A456 C483 G484 U485 C486 C487 C488 C489 U490 G491 C492 G493 A494 U495 U496 U497 C498 C499 C500 C501 A502 A503 A504 U505 G506 U507 G508 G509 G510 A511 A512 A513 C514 U515 C516 G517 A518 C519 U520 G521 C522 A523 U524 A525 A526 U527 U528 U529 G530 U531 G532 G533 U534 A535 G536 U537 G538 G539 G540 G541 G542 A543 C544 U545 G546 C547 G548 U549 U550 C551 G552 C553 G554 C555 U556 U557 U558 C559 C560 C561 C562 U563 G564
Unit 4 A601 U602 A603 C604 U605 U606 A607 C608 C609 U610 G611 G612 C613 A614 G615 G616 G617 G618 A619 G620 A621 U622 A623 C624 C625 A626 U627 G628 A629 U630 C631 A632 C633 G634 A635 A636 G637 G638 U639 G640 G641 U642 U643 U644 U645 C646 C647 C648 A649 G650 G651 G652 G653 A654 G655 A656 C683 G684 U685 C686 C687 C688 C689 U690 G691 C692 G693 A694 U695 U696 U697 C698 C699 C700 C701 A702 A703 A704 U705 G706 U707 G708 G709 G710 A711 A712 A713 C714 U715 C716 G717 A718 C719 U720 G721 C722 A723 U724 A725 A726 U727 U728 U729 G730 U731 G732 G733 U734 A735 G736 U737 G738 G739 G740 G741 G742 A743 C744 U745 G746 C747 G748 U749 U750 C751 G752 C753 G754 C755 U756 U757 U758 C759 C760 C761 C762 U763 G764
Ligands
Unit 41 ZN78
Unit 42 ZN278
Unit 43 ZN478
Unit 44 ZN678
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany