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Sequence, Chains, Asymmetric and Biological Units

Title T. TENGCONGENSIS GLMS RIBOZYME BOUND TO GLUCOSAMINE-6-PHOSPH
Keywords RIBOZYME, RIBOSWITCH, GLUCOSE-6-PHOSPHATE, GLUCOSAMINE-6-PHO DNA, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2Z75     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 21 435 0
2  DNA/RNA    B 123 2623 0
3  Ligand   GLMS RIBOZYME SUBSTRATE RNA  A 1 0 16
4  Ligand   GLMS RIBOZYME RNA  B 9 0 9
5 Water     182 0 182
total       336 3058 207

Nucleic acids
Unit 1 DA-1 G1 C2 G3 C4 C5 U6 G7 G8 A9 C10 U11 U12 A13 A14 A15 G16 C17 C18 A19 U20
Unit 2 G23 G24 C25 U26 U27 U28 A29 A30 G31 U32 U33 G34 A35 C36 G37 A38 G39 G40 G41 C42 A43 G44 G45 G46 U47 U48 U49 A50 U51 C52 G53 A54 G55 A56 C57 A58 U59 C60 G61 G62 C63 G64 G65 G66 U67 G68 C69 C70 C71 U72 G73 C74 G75 G76 U77 C78 U79 U80 C81 C82 U83 G84 C85 G86 A87 C88 C89 G90 U91 U92 A93 G94 A95 G96 G97 A98 C99 U100 G101 G102 U103 A104 A105 A106 A107 C108 C109 A110 C111 A112 G113 G114 C115 G116 A117 C118 U119 G120 U121 G122 G123 C124 A125 U126 A127 G128 A129 G130 C131 A132 G133 U134 C135 C136 G137 G138 G139 C140 A141 G142 G143 A144 A145

Ligands
Unit 3 GLP201
Unit 4 MG301 MG302 MG303 MG304 MG305 MG306 MG307 MG308 MG309

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany