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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MA NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCC RADIODURANS, COMPLEX WITH GD
Keywords HYDROLASE, DIMERIC DUTPASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2YEU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DR2231  A 149 2272 0
2  Protein   DR2231  B 147 2240 0
3  Protein   DR2231  C 149 2275 0
4  Protein   DR2231  D 150 2283 0
5  Protein   DR2231  E 148 2245 0
6  Protein   DR2231  F 146 2229 0
7  Ligand   DR2231  A 8 0 72
8  Ligand   DR2231  B 8 0 81
9  Ligand   DR2231  C 5 0 30
10  Ligand   DR2231  D 9 0 95
11  Ligand   DR2231  E 6 0 44
12  Ligand   DR2231  F 7 0 58
13 Water     682 0 682
total       1614 13544 1062

Proteins
Unit 1 GLY-5 ILE-4 ASP-3 PRO-2 PHE-1 THR0 MET1 SER2 ASP3 LEU4 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143
Unit 2 GLY-5 ILE-4 ASP-3 PRO-2 PHE-1 THR0 MET1 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143 ALA144
Unit 3 ILE-4 ASP-3 PRO-2 PHE-1 THR0 MET1 SER2 ASP3 LEU4 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143 ALA144
Unit 4 GLY-5 ILE-4 ASP-3 PRO-2 PHE-1 THR0 MET1 SER2 ASP3 LEU4 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143 ALA144
Unit 5 GLY-5 ILE-4 ASP-3 PRO-2 PHE-1 THR0 SER2 ASP3 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143 ALA144
Unit 6 GLY-5 ILE-4 ASP-3 PRO-2 PHE-1 THR0 MET1 PRO5 CYS6 PRO7 PRO8 THR9 ASN10 ALA11 GLU12 ARG13 LEU14 HIS15 GLU16 PHE17 HIS18 ARG19 ALA20 ILE21 GLY22 ALA23 ALA24 THR25 PRO26 GLU27 ARG28 PRO29 THR30 PRO31 PRO32 PRO33 PRO34 GLU35 LEU36 LEU37 ARG38 LEU39 ARG40 GLN41 THR42 LEU43 LEU44 ASP45 GLU46 GLU47 SER48 ALA49 GLU50 VAL51 ARG52 ALA53 GLU54 ILE55 ASP56 HIS57 LEU58 LEU59 ALA60 ARG61 GLN62 ALA63 ALA64 GLY65 GLU66 ALA67 LEU68 SER69 ALA70 GLY71 ASP72 LEU73 ALA74 PRO75 LEU76 ALA77 HIS78 GLU79 LEU80 ALA81 ASP82 LEU83 LEU84 TYR85 VAL86 THR87 TYR88 GLY89 ALA90 LEU91 ASP92 GLN93 LEU94 GLY95 ILE96 ASP97 ALA98 ASP99 ALA100 VAL101 PHE102 ALA103 GLU104 VAL105 HIS106 ARG107 ALA108 ASN109 LEU110 SER111 LYS112 ALA113 SER114 GLY115 PRO116 ARG117 ARG118 ALA119 ASP120 GLY121 LYS122 GLN123 LEU124 LYS125 PRO126 GLU127 GLY128 TRP129 ARG130 PRO131 ALA132 ASP133 VAL134 ARG135 GLY136 VAL137 ILE138 GLU139 ARG140 LEU141 GLN142 HIS143

Ligands
Unit 7 SO41144 SO41145 SO41146 GOL1147 GOL1148 GOL1149 GOL1150 GD1151
Unit 8 SO41145 SO41146 GOL1147 GOL1148 GOL1149 GOL1150 GOL1151 GD1152
Unit 9 SO41145 SO41146 SO41147 GOL1148 GD1149
Unit 10 SO41145 SO41146 GOL1147 GOL1148 GOL1149 GOL1150 GOL1151 GOL1152 GD1153
Unit 11 SO41145 SO41146 SO41147 GOL1148 GOL1149 GD1150
Unit 12 SO41144 SO41145 SO41146 GOL1147 GOL1148 GOL1149 GD1150

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany