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| Title | STRUCTURE OF HDAC4 CATALYTIC DOMAIN WITH A GAIN-OF-FUNCTION MUTATION BOUND TO A HYDROXAMIC ACID INHIBITOR | |
| Keywords | INHIBITOR, REPRESSOR, CHROMATIN, COILED COIL, HISTONE DEACETYLASE, TRANSCRIPTION REGULATION, UBL CONJUGATION, CHROMATIN REGULATOR, POLYMORPHISM, TRANSCRIPTION, PHOSPHOPROTEIN, HDAC, ZINC, HDACI, NUCLEUS, HYDROLASE, CYTOPLASM | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2VQV | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | HISTONE DEACETYLASE 4 | A | 355 | 2658 | 0 |
| 2 | Protein | HISTONE DEACETYLASE 4 | B | 356 | 2665 | 0 |
| 3 | Ligand | HISTONE DEACETYLASE 4 | A | 5 | 0 | 34 |
| 4 | Ligand | HISTONE DEACETYLASE 4 | B | 7 | 0 | 44 |
| 5 | Water | 5 | 0 | 5 | ||
| total | 728 | 5323 | 83 |
| Unit 1 | ARG7 PHE8 THR9 THR10 GLY11 LEU12 VAL13 TYR14 ASP15 THR16 LEU17 MET18 LEU19 LYS20 HIS34 ALA35 GLY36 ARG37 ILE38 GLN39 SER40 ILE41 TRP42 SER43 ARG44 LEU45 GLN46 GLU47 THR48 GLY49 LEU50 ARG51 GLY52 LYS53 CYS54 GLU55 ALA56 ILE57 ARG58 GLY59 ARG60 LYS61 ALA62 THR63 LEU64 GLU65 GLU66 LEU67 GLN68 THR69 VAL70 HIS71 SER72 GLU73 ALA74 HIS75 THR76 LEU77 LEU78 TYR79 GLY80 THR81 ASN82 PRO83 ASP115 THR116 ILE117 TRP118 ASN119 GLU120 VAL121 HIS122 SER123 ALA124 GLY125 ALA126 ALA127 ARG128 LEU129 ALA130 VAL131 GLY132 CYS133 VAL134 VAL135 GLU136 LEU137 VAL138 PHE139 LYS140 VAL141 ALA142 THR143 GLY144 GLU145 LEU146 LYS147 ASN148 GLY149 PHE150 ALA151 VAL152 VAL153 ARG154 PRO155 PRO156 GLY157 HIS158 HIS159 ALA160 GLU161 GLU162 SER163 THR164 PRO165 MET166 GLY167 PHE168 CYS169 TYR170 PHE171 ASN172 SER173 VAL174 ALA175 VAL176 ALA177 ALA178 LYS179 LEU180 LEU181 GLN182 GLN183 ARG184 LEU185 SER186 VAL187 SER188 LYS189 ILE190 LEU191 ILE192 VAL193 ASP194 TRP195 ASP196 VAL197 HIS198 HIS199 GLY200 ASN201 GLY202 THR203 GLN204 GLN205 ALA206 PHE207 TYR208 SER209 ASP210 PRO211 SER212 VAL213 LEU214 TYR215 MET216 SER217 LEU218 HIS219 ARG220 TYR221 ASP222 ASP223 GLY224 ASN225 PHE226 PHE227 PRO228 GLY229 SER230 GLY231 ALA232 PRO233 ASP234 GLU235 VAL236 GLY237 THR238 GLY239 PRO240 GLY241 VAL242 GLY243 PHE244 ASN245 VAL246 ASN247 MET248 ALA249 PHE250 THR251 GLY252 GLY253 LEU254 ASP255 PRO256 PRO257 MET258 GLY259 ASP260 ALA261 GLU262 TYR263 LEU264 ALA265 ALA266 PHE267 ARG268 THR269 VAL270 VAL271 MET272 PRO273 ILE274 ALA275 SER276 GLU277 PHE278 ALA279 PRO280 ASP281 VAL282 VAL283 LEU284 VAL285 SER286 SER287 GLY288 PHE289 ASP290 ALA291 VAL292 GLU293 GLY294 HIS295 PRO296 THR297 PRO298 LEU299 GLY300 GLY301 TYR302 ASN303 LEU304 SER305 ALA306 ARG307 CYS308 PHE309 GLY310 TYR311 LEU312 THR313 LYS314 GLN315 LEU316 MET317 GLY318 LEU319 ALA320 GLY321 GLY322 ARG323 ILE324 VAL325 LEU326 ALA327 LEU328 GLU329 GLY330 GLY331 TYR332 ASP333 LEU334 THR335 ALA336 ILE337 CYS338 ASP339 ALA340 SER341 GLU342 ALA343 CYS344 VAL345 SER346 ALA347 LEU348 LEU349 GLY350 ASN351 GLU352 LEU353 ASP354 PRO355 LEU356 PRO357 GLU358 LYS359 VAL360 LEU361 GLN362 GLN363 ARG364 PRO365 ASN366 ALA367 ASN368 ALA369 VAL370 ARG371 SER372 MET373 GLU374 LYS375 VAL376 MET377 GLU378 ILE379 HIS380 SER381 LYS382 TYR383 TRP384 ARG385 CYS386 LEU387 GLN388 ARG389 THR390 THR391 SER392 THR393 ALA394 GLY395 ARG396 SER397 LEU398 ILE399 GLU400 ALA401 GLN402 THR403 CYS404 GLU405 |
| Unit 2 | ARG7 PHE8 THR9 THR10 GLY11 LEU12 VAL13 TYR14 ASP15 THR16 LEU17 MET18 LEU19 LYS20 HIS34 ALA35 GLY36 ARG37 ILE38 GLN39 SER40 ILE41 TRP42 SER43 ARG44 LEU45 GLN46 GLU47 THR48 GLY49 LEU50 ARG51 GLY52 LYS53 CYS54 GLU55 ALA56 ILE57 ARG58 GLY59 ARG60 LYS61 ALA62 THR63 LEU64 GLU65 GLU66 LEU67 GLN68 THR69 VAL70 HIS71 SER72 GLU73 ALA74 HIS75 THR76 LEU77 LEU78 TYR79 GLY80 THR81 ASN82 PRO83 LEU84 ASP115 THR116 ILE117 TRP118 ASN119 GLU120 VAL121 HIS122 SER123 ALA124 GLY125 ALA126 ALA127 ARG128 LEU129 ALA130 VAL131 GLY132 CYS133 VAL134 VAL135 GLU136 LEU137 VAL138 PHE139 LYS140 VAL141 ALA142 THR143 GLY144 GLU145 LEU146 LYS147 ASN148 GLY149 PHE150 ALA151 VAL152 VAL153 ARG154 PRO155 PRO156 GLY157 HIS158 HIS159 ALA160 GLU161 GLU162 SER163 THR164 PRO165 MET166 GLY167 PHE168 CYS169 TYR170 PHE171 ASN172 SER173 VAL174 ALA175 VAL176 ALA177 ALA178 LYS179 LEU180 LEU181 GLN182 GLN183 ARG184 LEU185 SER186 VAL187 SER188 LYS189 ILE190 LEU191 ILE192 VAL193 ASP194 TRP195 ASP196 VAL197 HIS198 HIS199 GLY200 ASN201 GLY202 THR203 GLN204 GLN205 ALA206 PHE207 TYR208 SER209 ASP210 PRO211 SER212 VAL213 LEU214 TYR215 MET216 SER217 LEU218 HIS219 ARG220 TYR221 ASP222 ASP223 GLY224 ASN225 PHE226 PHE227 PRO228 GLY229 SER230 GLY231 ALA232 PRO233 ASP234 GLU235 VAL236 GLY237 THR238 GLY239 PRO240 GLY241 VAL242 GLY243 PHE244 ASN245 VAL246 ASN247 MET248 ALA249 PHE250 THR251 GLY252 GLY253 LEU254 ASP255 PRO256 PRO257 MET258 GLY259 ASP260 ALA261 GLU262 TYR263 LEU264 ALA265 ALA266 PHE267 ARG268 THR269 VAL270 VAL271 MET272 PRO273 ILE274 ALA275 SER276 GLU277 PHE278 ALA279 PRO280 ASP281 VAL282 VAL283 LEU284 VAL285 SER286 SER287 GLY288 PHE289 ASP290 ALA291 VAL292 GLU293 GLY294 HIS295 PRO296 THR297 PRO298 LEU299 GLY300 GLY301 TYR302 ASN303 LEU304 SER305 ALA306 ARG307 CYS308 PHE309 GLY310 TYR311 LEU312 THR313 LYS314 GLN315 LEU316 MET317 GLY318 LEU319 ALA320 GLY321 GLY322 ARG323 ILE324 VAL325 LEU326 ALA327 LEU328 GLU329 GLY330 GLY331 TYR332 ASP333 LEU334 THR335 ALA336 ILE337 CYS338 ASP339 ALA340 SER341 GLU342 ALA343 CYS344 VAL345 SER346 ALA347 LEU348 LEU349 GLY350 ASN351 GLU352 LEU353 ASP354 PRO355 LEU356 PRO357 GLU358 LYS359 VAL360 LEU361 GLN362 GLN363 ARG364 PRO365 ASN366 ALA367 ASN368 ALA369 VAL370 ARG371 SER372 MET373 GLU374 LYS375 VAL376 MET377 GLU378 ILE379 HIS380 SER381 LYS382 TYR383 TRP384 ARG385 CYS386 LEU387 GLN388 ARG389 THR390 THR391 SER392 THR393 ALA394 GLY395 ARG396 SER397 LEU398 ILE399 GLU400 ALA401 GLN402 THR403 CYS404 GLU405 |
| Unit 3 | SO41406 K1407 K1408 HA31409 ZN1410 |
| Unit 4 | SO41406 SO41407 SO41408 K1409 K1410 HA31411 ZN1412 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |