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Sequence, Chains, Asymmetric and Biological Units

Title DECODING OF METHYLATED HISTONE H3 TAIL BY THE PYGO-BCL9 WNT COMPLEX
Keywords GENE REGULATION, WNT SIGNALING PATHWAY, WNT SIGNALING COMPLE CHROMOSOMAL REARRANGEMENT, SIGNALING PROTEIN, BCL9 HD1 DOMA HPYGO1 PHD DOMAIN, PROTO-ONCOGENE, PHOSPHOPROTEIN, HISTONE ZINC, NUCLEUS, ZINC-FINGER, METAL-BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VPG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PYGOPUS HOMOLOG 1  A 61 455 0
2  Protein   B-CELL CLL/LYMPHOMA 9 PROTEIN  B 30 222 0
3  Protein   PYGOPUS HOMOLOG 1  C 63 464 0
4  Protein   B-CELL CLL/LYMPHOMA 9 PROTEIN  D 30 222 0
5  Protein   HISTONE H3 TAIL  P 7 33 24
6  Protein   HISTONE H3 TAIL  R 7 33 24
7  Ligand   PYGOPUS HOMOLOG 1  A 3 0 8
8  Ligand   PYGOPUS HOMOLOG 1  C 2 0 2
9 Water     259 0 259
total       462 1429 317

Proteins
Unit 1 MET338 ALA339 VAL340 TYR341 PRO342 CYS343 GLY344 ILE345 CYS346 THR347 ASN348 GLU349 VAL350 ASN351 ASP352 ASP353 GLN354 ASP355 ALA356 ILE357 LEU358 CYS359 GLU360 ALA361 SER362 CYS363 GLN364 LYS365 TRP366 PHE367 HIS368 ARG369 ILE370 CYS371 THR372 GLY373 MET374 THR375 GLU376 THR377 ALA378 TYR379 GLY380 LEU381 LEU382 THR383 ALA384 GLU385 ALA386 SER387 ALA388 VAL389 TRP390 GLY391 CYS392 ASP393 THR394 CYS395 MET396 ALA397 ASP398
Unit 2 GLY174 ALA175 MET176 VAL177 TYR178 VAL179 PHE180 SER181 THR182 GLU183 MET184 ALA185 ASN186 LYS187 ALA188 ALA189 GLU190 ALA191 VAL192 LEU193 LYS194 GLY195 GLN196 VAL197 GLU198 THR199 ILE200 VAL201 SER202 PHE203
Unit 3 GLY336 ALA337 MET338 ALA339 VAL340 TYR341 PRO342 CYS343 GLY344 ILE345 CYS346 THR347 ASN348 GLU349 VAL350 ASN351 ASP352 ASP353 GLN354 ASP355 ALA356 ILE357 LEU358 CYS359 GLU360 ALA361 SER362 CYS363 GLN364 LYS365 TRP366 PHE367 HIS368 ARG369 ILE370 CYS371 THR372 GLY373 MET374 THR375 GLU376 THR377 ALA378 TYR379 GLY380 LEU381 LEU382 THR383 ALA384 GLU385 ALA386 SER387 ALA388 VAL389 TRP390 GLY391 CYS392 ASP393 THR394 CYS395 MET396 ALA397 ASP398
Unit 4 GLY174 ALA175 MET176 VAL177 TYR178 VAL179 PHE180 SER181 THR182 GLU183 MET184 ALA185 ASN186 LYS187 ALA188 ALA189 GLU190 ALA191 VAL192 LEU193 LYS194 GLY195 GLN196 VAL197 GLU198 THR199 ILE200 VAL201 SER202 PHE203
Unit 5 ALA1 DA22 THR3 MLY4 GLN5 THR6 ALA7
Unit 6 ALA1 DA22 THR3 MLY4 GLN5 THR6 ALA7

Ligands
Unit 7 GOL1399 ZN1400 ZN1401
Unit 8 ZN1399 ZN1400

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany