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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AUTHENTIC PROVIDENCE VIRUS
Keywords VIRUS, CAPSID, COAT PROTEIN, PROTEIN-RNA COMPLEX, BETA BARRE LIKE DOMAIN, TETRAVIRUS, TETRAVIRIDAE, ICOSAHEDRAL VIRUS, QUASIEQUIVALENCE, AUTO-CATALYTIC CLEAVAGE, AUTO PROTEOLYSIS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2QQP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LARGE CAPSID PROTEIN  A 484 3714 0
2  Protein   SMALL CAPSID PROTEIN  B 39 255 0
3  Protein   LARGE CAPSID PROTEIN  C 484 3714 0
4  Protein   SMALL CAPSID PROTEIN  D 40 263 0
5  Protein   LARGE CAPSID PROTEIN  E 517 3948 0
6  Protein   SMALL CAPSID PROTEIN  F 67 448 0
7  Protein   LARGE CAPSID PROTEIN  G 518 3957 0
8  Protein   SMALL CAPSID PROTEIN  H 38 250 0
9  RNA    R 4 77 0
10  Ligand   LARGE CAPSID PROTEIN  A 1 0 1
11  Ligand   LARGE CAPSID PROTEIN  G 1 0 1
12 Water     5 0 6
total       2198 16626 8
Proteins
Unit 1 GLN73 SER74 ILE75 ASP76 PRO77 SER78 GLU79 GLY80 ALA81 VAL82 GLY83 TRP84 PHE85 TYR86 LYS87 TYR88 MET89 ASP90 PRO91 ALA92 GLY93 ALA94 VAL95 GLU96 SER97 GLY98 LYS99 ALA100 LEU101 GLY102 GLU103 PHE104 SER105 LYS106 VAL107 PRO108 ASP109 GLY110 LEU111 LEU112 ARG113 TYR114 SER115 VAL116 ASP117 ALA118 GLU119 GLN120 ARG121 PRO122 ILE123 VAL124 THR125 ILE126 GLU127 CYS128 PRO129 THR130 VAL131 SER132 GLU133 SER134 ASP135 LEU136 PRO137 LEU138 ASP139 GLY140 LYS141 LEU142 TRP143 ARG144 VAL145 SER146 PHE147 ILE148 SER149 PHE150 PRO151 ALA152 PHE153 ARG154 LEU155 ASN156 PHE157 ILE158 ALA159 LEU160 ALA161 ASN162 ILE163 ASN164 ASN165 GLU166 ALA167 LEU168 THR169 LEU170 GLU171 THR172 ARG173 ASN174 THR175 PHE176 ILE177 GLN178 THR179 LEU180 ASN181 ASN182 ILE183 THR184 ASN185 TRP186 ARG187 ASP188 LEU189 GLY190 THR191 GLY192 GLN193 TRP194 ALA195 GLN196 PHE197 ALA198 PRO199 GLY200 TRP201 TYR202 TYR203 SER204 ILE205 TYR206 VAL207 LEU208 PRO209 ASN210 THR211 TYR212 ALA213 MET214 ALA215 GLU216 ILE217 GLY218 ASP219 ARG220 THR221 ASP222 SER223 VAL224 THR225 GLN226 PHE227 ARG228 LYS229 VAL230 TYR231 LYS232 GLY233 ILE234 THR235 PHE236 GLU237 PHE238 ASN239 ALA240 PRO241 THR242 LEU243 ILE244 ASP245 GLN246 GLY247 TRP248 TRP249 VAL250 GLY251 ALA252 HIS253 ILE254 PRO255 VAL256 LYS257 PRO258 GLN259 SER260 GLU261 THR262 ILE263 PRO264 ALA265 ALA266 GLU267 ARG268 PHE269 SER270 ALA271 GLY272 SER273 MET274 THR275 VAL276 SER277 ALA278 SER279 ASN280 ALA281 ILE282 PHE283 GLN284 PRO285 SER286 ASN287 THR288 VAL289 ALA290 ARG291 ILE292 VAL293 TRP294 SER295 ILE296 THR297 PRO298 LEU299 PRO300 VAL301 ALA302 THR303 VAL304 ALA305 LEU306 THR307 THR308 GLY309 THR310 GLY311 GLY312 THR313 ASN314 ASN315 THR316 SER317 GLY318 LYS319 PHE320 PHE321 SER322 VAL323 GLU324 ILE325 ASP326 GLY327 ASN328 VAL329 ASN330 SER331 VAL332 TRP333 THR334 PHE335 THR336 ALA337 PRO338 ALA339 SER340 ILE341 LEU342 ALA343 GLU344 GLY345 GLU346 PRO347 PHE348 ALA349 GLU350 GLU351 GLY352 ASP353 THR354 THR355 SER356 PHE357 SER358 MET359 THR360 THR361 ILE362 THR363 ALA364 ASP365 THR366 VAL367 VAL368 TYR369 SER370 VAL371 SER372 SER373 SER374 LEU375 THR376 GLY377 SER378 SER379 VAL380 ILE381 VAL382 ARG383 GLY384 VAL385 THR386 LYS387 GLY388 SER389 GLY390 VAL391 SER392 ILE393 THR394 PRO395 VAL396 THR397 VAL398 GLY399 ILE400 ASP401 THR402 GLU403 ALA404 VAL405 ASN406 ARG407 LEU408 SER409 ILE410 GLU411 MET412 PRO413 ALA414 LEU415 THR416 THR417 GLU418 GLU419 VAL420 THR421 THR422 ASN423 VAL424 PRO425 LYS426 TYR427 GLU428 GLN429 PHE430 LEU431 CYS432 LYS433 GLU434 SER435 GLY436 GLY437 ALA438 TYR439 ILE440 VAL441 HIS442 TYR443 LYS444 MET445 ASN446 ASN447 PRO448 VAL449 PHE450 GLU451 MET452 THR453 GLY454 GLU455 GLU456 ASN457 PHE458 GLY459 GLY460 PHE461 GLN462 PHE463 HIS464 TYR465 PRO466 GLY467 TYR468 ASP469 PRO470 GLU471 ASN472 ASN473 ALA474 LEU475 GLY476 LEU477 ARG478 GLY479 ILE480 VAL481 ASP482 THR483 PHE484 GLU485 ASN486 ASN487 PHE488 SER489 SER490 ALA491 VAL492 VAL493 HIS494 PHE495 TRP496 GLY497 ILE498 SER499 GLN500 SER501 ALA502 THR503 ILE504 VAL505 CYS506 LYS507 THR508 TYR509 ASP510 GLY511 TRP512 GLU513 GLY514 THR515 THR516 ASN517 ALA518 GLY519 SER520 THR521 VAL522 GLY523 GLN524 PHE525 ALA526 HIS527 THR528 GLY529 ALA530 GLU531 GLU532 GLU533 ASP534 GLU535 VAL536 VAL537 GLN538 LEU539 ALA540 ASN541 ARG542 LEU543 GLN544 MET545 GLU546 LEU547 THR548 GLY549 VAL550 TYR551 GLN552 ALA553 ASP554 ASP555 ASN556
Unit 2 PHE557 ALA558 GLY559 THR560 VAL561 SER562 ALA563 LEU564 ALA565 SER566 ILE567 GLY568 LEU569 GLY570 LEU571 LEU572 GLY573 LYS574 SER575 SER576 ALA577 THR578 PRO579 SER580 VAL581 ILE582 LYS583 GLY584 ILE585 ALA586 GLN587 GLN588 ALA589 VAL590 GLY591 ALA592 VAL593 GLN594 ALA595
Unit 3 GLN73 SER74 ILE75 ASP76 PRO77 SER78 GLU79 GLY80 ALA81 VAL82 GLY83 TRP84 PHE85 TYR86 LYS87 TYR88 MET89 ASP90 PRO91 ALA92 GLY93 ALA94 VAL95 GLU96 SER97 GLY98 LYS99 ALA100 LEU101 GLY102 GLU103 PHE104 SER105 LYS106 VAL107 PRO108 ASP109 GLY110 LEU111 LEU112 ARG113 TYR114 SER115 VAL116 ASP117 ALA118 GLU119 GLN120 ARG121 PRO122 ILE123 VAL124 THR125 ILE126 GLU127 CYS128 PRO129 THR130 VAL131 SER132 GLU133 SER134 ASP135 LEU136 PRO137 LEU138 ASP139 GLY140 LYS141 LEU142 TRP143 ARG144 VAL145 SER146 PHE147 ILE148 SER149 PHE150 PRO151 ALA152 PHE153 ARG154 LEU155 ASN156 PHE157 ILE158 ALA159 LEU160 ALA161 ASN162 ILE163 ASN164 ASN165 GLU166 ALA167 LEU168 THR169 LEU170 GLU171 THR172 ARG173 ASN174 THR175 PHE176 ILE177 GLN178 THR179 LEU180 ASN181 ASN182 ILE183 THR184 ASN185 TRP186 ARG187 ASP188 LEU189 GLY190 THR191 GLY192 GLN193 TRP194 ALA195 GLN196 PHE197 ALA198 PRO199 GLY200 TRP201 TYR202 TYR203 SER204 ILE205 TYR206 VAL207 LEU208 PRO209 ASN210 THR211 TYR212 ALA213 MET214 ALA215 GLU216 ILE217 GLY218 ASP219 ARG220 THR221 ASP222 SER223 VAL224 THR225 GLN226 PHE227 ARG228 LYS229 VAL230 TYR231 LYS232 GLY233 ILE234 THR235 PHE236 GLU237 PHE238 ASN239 ALA240 PRO241 THR242 LEU243 ILE244 ASP245 GLN246 GLY247 TRP248 TRP249 VAL250 GLY251 ALA252 HIS253 ILE254 PRO255 VAL256 LYS257 PRO258 GLN259 SER260 GLU261 THR262 ILE263 PRO264 ALA265 ALA266 GLU267 ARG268 PHE269 SER270 ALA271 GLY272 SER273 MET274 THR275 VAL276 SER277 ALA278 SER279 ASN280 ALA281 ILE282 PHE283 GLN284 PRO285 SER286 ASN287 THR288 VAL289 ALA290 ARG291 ILE292 VAL293 TRP294 SER295 ILE296 THR297 PRO298 LEU299 PRO300 VAL301 ALA302 THR303 VAL304 ALA305 LEU306 THR307 THR308 GLY309 THR310 GLY311 GLY312 THR313 ASN314 ASN315 THR316 SER317 GLY318 LYS319 PHE320 PHE321 SER322 VAL323 GLU324 ILE325 ASP326 GLY327 ASN328 VAL329 ASN330 SER331 VAL332 TRP333 THR334 PHE335 THR336 ALA337 PRO338 ALA339 SER340 ILE341 LEU342 ALA343 GLU344 GLY345 GLU346 PRO347 PHE348 ALA349 GLU350 GLU351 GLY352 ASP353 THR354 THR355 SER356 PHE357 SER358 MET359 THR360 THR361 ILE362 THR363 ALA364 ASP365 THR366 VAL367 VAL368 TYR369 SER370 VAL371 SER372 SER373 SER374 LEU375 THR376 GLY377 SER378 SER379 VAL380 ILE381 VAL382 ARG383 GLY384 VAL385 THR386 LYS387 GLY388 SER389 GLY390 VAL391 SER392 ILE393 THR394 PRO395 VAL396 THR397 VAL398 GLY399 ILE400 ASP401 THR402 GLU403 ALA404 VAL405 ASN406 ARG407 LEU408 SER409 ILE410 GLU411 MET412 PRO413 ALA414 LEU415 THR416 THR417 GLU418 GLU419 VAL420 THR421 THR422 ASN423 VAL424 PRO425 LYS426 TYR427 GLU428 GLN429 PHE430 LEU431 CYS432 LYS433 GLU434 SER435 GLY436 GLY437 ALA438 TYR439 ILE440 VAL441 HIS442 TYR443 LYS444 MET445 ASN446 ASN447 PRO448 VAL449 PHE450 GLU451 MET452 THR453 GLY454 GLU455 GLU456 ASN457 PHE458 GLY459 GLY460 PHE461 GLN462 PHE463 HIS464 TYR465 PRO466 GLY467 TYR468 ASP469 PRO470 GLU471 ASN472 ASN473 ALA474 LEU475 GLY476 LEU477 ARG478 GLY479 ILE480 VAL481 ASP482 THR483 PHE484 GLU485 ASN486 ASN487 PHE488 SER489 SER490 ALA491 VAL492 VAL493 HIS494 PHE495 TRP496 GLY497 ILE498 SER499 GLN500 SER501 ALA502 THR503 ILE504 VAL505 CYS506 LYS507 THR508 TYR509 ASP510 GLY511 TRP512 GLU513 GLY514 THR515 THR516 ASN517 ALA518 GLY519 SER520 THR521 VAL522 GLY523 GLN524 PHE525 ALA526 HIS527 THR528 GLY529 ALA530 GLU531 GLU532 GLU533 ASP534 GLU535 VAL536 VAL537 GLN538 LEU539 ALA540 ASN541 ARG542 LEU543 GLN544 MET545 GLU546 LEU547 THR548 GLY549 VAL550 TYR551 GLN552 ALA553 ASP554 ASP555 ASN556
Unit 4 PHE557 ALA558 GLY559 THR560 VAL561 SER562 ALA563 LEU564 ALA565 SER566 ILE567 GLY568 LEU569 GLY570 LEU571 LEU572 GLY573 LYS574 SER575 SER576 ALA577 THR578 PRO579 SER580 VAL581 ILE582 LYS583 GLY584 ILE585 ALA586 GLN587 GLN588 ALA589 VAL590 GLY591 ALA592 VAL593 GLN594 ALA595 ASN596
Unit 5 GLN40 ALA41 THR42 ILE43 LEU44 LYS45 PRO46 GLN47 LEU48 LEU49 PRO50 GLY51 GLU52 SER53 VAL54 ALA55 PRO56 SER57 GLY58 GLY59 ARG60 GLY61 THR62 MET63 ASP64 PRO65 PRO66 VAL67 HIS68 GLU69 ILE70 CYS71 ALA72 GLN73 SER74 ILE75 ASP76 PRO77 SER78 GLU79 GLY80 ALA81 VAL82 GLY83 TRP84 PHE85 TYR86 LYS87 TYR88 MET89 ASP90 PRO91 ALA92 GLY93 ALA94 VAL95 GLU96 SER97 GLY98 LYS99 ALA100 LEU101 GLY102 GLU103 PHE104 SER105 LYS106 VAL107 PRO108 ASP109 GLY110 LEU111 LEU112 ARG113 TYR114 SER115 VAL116 ASP117 ALA118 GLU119 GLN120 ARG121 PRO122 ILE123 VAL124 THR125 ILE126 GLU127 CYS128 PRO129 THR130 VAL131 SER132 GLU133 SER134 ASP135 LEU136 PRO137 LEU138 ASP139 GLY140 LYS141 LEU142 TRP143 ARG144 VAL145 SER146 PHE147 ILE148 SER149 PHE150 PRO151 ALA152 PHE153 ARG154 LEU155 ASN156 PHE157 ILE158 ALA159 LEU160 ALA161 ASN162 ILE163 ASN164 ASN165 GLU166 ALA167 LEU168 THR169 LEU170 GLU171 THR172 ARG173 ASN174 THR175 PHE176 ILE177 GLN178 THR179 LEU180 ASN181 ASN182 ILE183 THR184 ASN185 TRP186 ARG187 ASP188 LEU189 GLY190 THR191 GLY192 GLN193 TRP194 ALA195 GLN196 PHE197 ALA198 PRO199 GLY200 TRP201 TYR202 TYR203 SER204 ILE205 TYR206 VAL207 LEU208 PRO209 ASN210 THR211 TYR212 ALA213 MET214 ALA215 GLU216 ILE217 GLY218 ASP219 ARG220 THR221 ASP222 SER223 VAL224 THR225 GLN226 PHE227 ARG228 LYS229 VAL230 TYR231 LYS232 GLY233 ILE234 THR235 PHE236 GLU237 PHE238 ASN239 ALA240 PRO241 THR242 LEU243 ILE244 ASP245 GLN246 GLY247 TRP248 TRP249 VAL250 GLY251 ALA252 HIS253 ILE254 PRO255 VAL256 LYS257 PRO258 GLN259 SER260 GLU261 THR262 ILE263 PRO264 ALA265 ALA266 GLU267 ARG268 PHE269 SER270 ALA271 GLY272 SER273 MET274 THR275 VAL276 SER277 ALA278 SER279 ASN280 ALA281 ILE282 PHE283 GLN284 PRO285 SER286 ASN287 THR288 VAL289 ALA290 ARG291 ILE292 VAL293 TRP294 SER295 ILE296 THR297 PRO298 LEU299 PRO300 VAL301 ALA302 THR303 VAL304 ALA305 LEU306 THR307 THR308 GLY309 THR310 GLY311 GLY312 THR313 ASN314 ASN315 THR316 SER317 GLY318 LYS319 PHE320 PHE321 SER322 VAL323 GLU324 ILE325 ASP326 GLY327 ASN328 VAL329 ASN330 SER331 VAL332 TRP333 THR334 PHE335 THR336 ALA337 PRO338 ALA339 SER340 ILE341 LEU342 ALA343 GLU344 GLY345 GLU346 PRO347 PHE348 ALA349 GLU350 GLU351 GLY352 ASP353 THR354 THR355 SER356 PHE357 SER358 MET359 THR360 THR361 ILE362 THR363 ALA364 ASP365 THR366 VAL367 VAL368 TYR369 SER370 VAL371 SER372 SER373 SER374 LEU375 THR376 GLY377 SER378 SER379 VAL380 ILE381 VAL382 ARG383 GLY384 VAL385 THR386 LYS387 GLY388 SER389 GLY390 VAL391 SER392 ILE393 THR394 PRO395 VAL396 THR397 VAL398 GLY399 ILE400 ASP401 THR402 GLU403 ALA404 VAL405 ASN406 ARG407 LEU408 SER409 ILE410 GLU411 MET412 PRO413 ALA414 LEU415 THR416 THR417 GLU418 GLU419 VAL420 THR421 THR422 ASN423 VAL424 PRO425 LYS426 TYR427 GLU428 GLN429 PHE430 LEU431 CYS432 LYS433 GLU434 SER435 GLY436 GLY437 ALA438 TYR439 ILE440 VAL441 HIS442 TYR443 LYS444 MET445 ASN446 ASN447 PRO448 VAL449 PHE450 GLU451 MET452 THR453 GLY454 GLU455 GLU456 ASN457 PHE458 GLY459 GLY460 PHE461 GLN462 PHE463 HIS464 TYR465 PRO466 GLY467 TYR468 ASP469 PRO470 GLU471 ASN472 ASN473 ALA474 LEU475 GLY476 LEU477 ARG478 GLY479 ILE480 VAL481 ASP482 THR483 PHE484 GLU485 ASN486 ASN487 PHE488 SER489 SER490 ALA491 VAL492 VAL493 HIS494 PHE495 TRP496 GLY497 ILE498 SER499 GLN500 SER501 ALA502 THR503 ILE504 VAL505 CYS506 LYS507 THR508 TYR509 ASP510 GLY511 TRP512 GLU513 GLY514 THR515 THR516 ASN517 ALA518 GLY519 SER520 THR521 VAL522 GLY523 GLN524 PHE525 ALA526 HIS527 THR528 GLY529 ALA530 GLU531 GLU532 GLU533 ASP534 GLU535 VAL536 VAL537 GLN538 LEU539 ALA540 ASN541 ARG542 LEU543 GLN544 MET545 GLU546 LEU547 THR548 GLY549 VAL550 TYR551 GLN552 ALA553 ASP554 ASP555 ASN556
Unit 6 PHE557 ALA558 GLY559 THR560 VAL561 SER562 ALA563 LEU564 ALA565 SER566 ILE567 GLY568 LEU569 GLY570 LEU571 LEU572 GLY573 LYS574 SER575 SER576 ALA577 THR578 PRO579 SER580 VAL581 ILE582 LYS583 GLY584 ILE585 ALA586 GLN587 GLN588 ALA589 VAL590 GLY591 ALA592 VAL593 GLN594 ALA595 ASN596 PRO597 GLY598 ILE599 LEU600 GLU601 GLY602 ALA603 VAL604 LYS605 ALA606 ILE607 GLY608 SER609 VAL610 GLY611 ALA612 ARG613 LEU614 VAL615 GLY616 SER617 ILE618 LYS619 ALA620 ARG621 ARG622 ALA623
Unit 7 GLU39 GLN40 ALA41 THR42 ILE43 LEU44 LYS45 PRO46 GLN47 LEU48 LEU49 PRO50 GLY51 GLU52 SER53 VAL54 ALA55 PRO56 SER57 GLY58 GLY59 ARG60 GLY61 THR62 MET63 ASP64 PRO65 PRO66 VAL67 HIS68 GLU69 ILE70 CYS71 ALA72 GLN73 SER74 ILE75 ASP76 PRO77 SER78 GLU79 GLY80 ALA81 VAL82 GLY83 TRP84 PHE85 TYR86 LYS87 TYR88 MET89 ASP90 PRO91 ALA92 GLY93 ALA94 VAL95 GLU96 SER97 GLY98 LYS99 ALA100 LEU101 GLY102 GLU103 PHE104 SER105 LYS106 VAL107 PRO108 ASP109 GLY110 LEU111 LEU112 ARG113 TYR114 SER115 VAL116 ASP117 ALA118 GLU119 GLN120 ARG121 PRO122 ILE123 VAL124 THR125 ILE126 GLU127 CYS128 PRO129 THR130 VAL131 SER132 GLU133 SER134 ASP135 LEU136 PRO137 LEU138 ASP139 GLY140 LYS141 LEU142 TRP143 ARG144 VAL145 SER146 PHE147 ILE148 SER149 PHE150 PRO151 ALA152 PHE153 ARG154 LEU155 ASN156 PHE157 ILE158 ALA159 LEU160 ALA161 ASN162 ILE163 ASN164 ASN165 GLU166 ALA167 LEU168 THR169 LEU170 GLU171 THR172 ARG173 ASN174 THR175 PHE176 ILE177 GLN178 THR179 LEU180 ASN181 ASN182 ILE183 THR184 ASN185 TRP186 ARG187 ASP188 LEU189 GLY190 THR191 GLY192 GLN193 TRP194 ALA195 GLN196 PHE197 ALA198 PRO199 GLY200 TRP201 TYR202 TYR203 SER204 ILE205 TYR206 VAL207 LEU208 PRO209 ASN210 THR211 TYR212 ALA213 MET214 ALA215 GLU216 ILE217 GLY218 ASP219 ARG220 THR221 ASP222 SER223 VAL224 THR225 GLN226 PHE227 ARG228 LYS229 VAL230 TYR231 LYS232 GLY233 ILE234 THR235 PHE236 GLU237 PHE238 ASN239 ALA240 PRO241 THR242 LEU243 ILE244 ASP245 GLN246 GLY247 TRP248 TRP249 VAL250 GLY251 ALA252 HIS253 ILE254 PRO255 VAL256 LYS257 PRO258 GLN259 SER260 GLU261 THR262 ILE263 PRO264 ALA265 ALA266 GLU267 ARG268 PHE269 SER270 ALA271 GLY272 SER273 MET274 THR275 VAL276 SER277 ALA278 SER279 ASN280 ALA281 ILE282 PHE283 GLN284 PRO285 SER286 ASN287 THR288 VAL289 ALA290 ARG291 ILE292 VAL293 TRP294 SER295 ILE296 THR297 PRO298 LEU299 PRO300 VAL301 ALA302 THR303 VAL304 ALA305 LEU306 THR307 THR308 GLY309 THR310 GLY311 GLY312 THR313 ASN314 ASN315 THR316 SER317 GLY318 LYS319 PHE320 PHE321 SER322 VAL323 GLU324 ILE325 ASP326 GLY327 ASN328 VAL329 ASN330 SER331 VAL332 TRP333 THR334 PHE335 THR336 ALA337 PRO338 ALA339 SER340 ILE341 LEU342 ALA343 GLU344 GLY345 GLU346 PRO347 PHE348 ALA349 GLU350 GLU351 GLY352 ASP353 THR354 THR355 SER356 PHE357 SER358 MET359 THR360 THR361 ILE362 THR363 ALA364 ASP365 THR366 VAL367 VAL368 TYR369 SER370 VAL371 SER372 SER373 SER374 LEU375 THR376 GLY377 SER378 SER379 VAL380 ILE381 VAL382 ARG383 GLY384 VAL385 THR386 LYS387 GLY388 SER389 GLY390 VAL391 SER392 ILE393 THR394 PRO395 VAL396 THR397 VAL398 GLY399 ILE400 ASP401 THR402 GLU403 ALA404 VAL405 ASN406 ARG407 LEU408 SER409 ILE410 GLU411 MET412 PRO413 ALA414 LEU415 THR416 THR417 GLU418 GLU419 VAL420 THR421 THR422 ASN423 VAL424 PRO425 LYS426 TYR427 GLU428 GLN429 PHE430 LEU431 CYS432 LYS433 GLU434 SER435 GLY436 GLY437 ALA438 TYR439 ILE440 VAL441 HIS442 TYR443 LYS444 MET445 ASN446 ASN447 PRO448 VAL449 PHE450 GLU451 MET452 THR453 GLY454 GLU455 GLU456 ASN457 PHE458 GLY459 GLY460 PHE461 GLN462 PHE463 HIS464 TYR465 PRO466 GLY467 TYR468 ASP469 PRO470 GLU471 ASN472 ASN473 ALA474 LEU475 GLY476 LEU477 ARG478 GLY479 ILE480 VAL481 ASP482 THR483 PHE484 GLU485 ASN486 ASN487 PHE488 SER489 SER490 ALA491 VAL492 VAL493 HIS494 PHE495 TRP496 GLY497 ILE498 SER499 GLN500 SER501 ALA502 THR503 ILE504 VAL505 CYS506 LYS507 THR508 TYR509 ASP510 GLY511 TRP512 GLU513 GLY514 THR515 THR516 ASN517 ALA518 GLY519 SER520 THR521 VAL522 GLY523 GLN524 PHE525 ALA526 HIS527 THR528 GLY529 ALA530 GLU531 GLU532 GLU533 ASP534 GLU535 VAL536 VAL537 GLN538 LEU539 ALA540 ASN541 ARG542 LEU543 GLN544 MET545 GLU546 LEU547 THR548 GLY549 VAL550 TYR551 GLN552 ALA553 ASP554 ASP555 ASN556
Unit 8 PHE557 ALA558 GLY559 THR560 VAL561 SER562 ALA563 LEU564 ALA565 SER566 ILE567 GLY568 LEU569 GLY570 LEU571 LEU572 GLY573 LYS574 SER575 SER576 ALA577 THR578 PRO579 SER580 VAL581 ILE582 LYS583 GLY584 ILE585 ALA586 GLN587 GLN588 ALA589 VAL590 GLY591 ALA592 VAL593 GLN594
Nucleic acids
Unit 9 U1 U2 U3 U4
Ligands
Unit 10 CA557
Unit 11 CA557
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany