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Sequence, Chains, Asymmetric and Biological Units

Title C-TERMINAL DOMAIN OF INFLUENZA A VIRUS POLYMERASE PB2 SUBUNI COMPLEX WITH HUMAN IMPORTIN ALPHA5
Keywords TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN, PROTEIN TRANSPORT, REPEATS, INFLUENZA A VIRUS RNA-DEPENDENT RNA POLYMERASE, BI NUCLEAR LOCALISATION SIGNAL, NUCLEAR IMPORT ADAPTER, HUMAN ALPHA5, HOST-VIRUS INTERACTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2JDQ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IMPORTIN ALPHA-1 SUBUNIT  A 424 3296 0
2  Protein   IMPORTIN ALPHA-1 SUBUNIT  B 426 3313 0
3  Protein   POLYMERASE BASIC PROTEIN 2  D 63 488 0
4  Protein   POLYMERASE BASIC PROTEIN 2  E 65 500 0
5 Water     265 0 265
total       1243 7597 265
Proteins
Unit 1 THR84 SER85 ASP86 MET87 ILE88 GLU89 MET90 ILE91 PHE92 SER93 LYS94 SER95 PRO96 GLU97 GLN98 GLN99 LEU100 SER101 ALA102 THR103 GLN104 LYS105 PHE106 ARG107 LYS108 LEU109 LEU110 SER111 LYS112 GLU113 PRO114 ASN115 PRO116 PRO117 ILE118 ASP119 GLU120 VAL121 ILE122 SER123 THR124 PRO125 GLY126 VAL127 VAL128 ALA129 ARG130 PHE131 VAL132 GLU133 PHE134 LEU135 LYS136 ARG137 LYS138 GLU139 ASN140 CYS141 THR142 LEU143 GLN144 PHE145 GLU146 SER147 ALA148 TRP149 VAL150 LEU151 THR152 ASN153 ILE154 ALA155 SER156 GLY157 ASN158 SER159 LEU160 GLN161 THR162 ARG163 ILE164 VAL165 ILE166 GLN167 ALA168 GLY169 ALA170 VAL171 PRO172 ILE173 PHE174 ILE175 GLU176 LEU177 LEU178 SER179 SER180 GLU181 PHE182 GLU183 ASP184 VAL185 GLN186 GLU187 GLN188 ALA189 VAL190 TRP191 ALA192 LEU193 GLY194 ASN195 ILE196 ALA197 GLY198 ASP199 SER200 THR201 MET202 CYS203 ARG204 ASP205 TYR206 VAL207 LEU208 ASP209 CYS210 ASN211 ILE212 LEU213 PRO214 PRO215 LEU216 LEU217 GLN218 LEU219 PHE220 SER221 LYS222 GLN223 ASN224 ARG225 LEU226 THR227 MET228 THR229 ARG230 ASN231 ALA232 VAL233 TRP234 ALA235 LEU236 SER237 ASN238 LEU239 CYS240 ARG241 GLY242 LYS243 SER244 PRO245 PRO246 PRO247 GLU248 PHE249 ALA250 LYS251 VAL252 SER253 PRO254 CYS255 LEU256 ASN257 VAL258 LEU259 SER260 TRP261 LEU262 LEU263 PHE264 VAL265 SER266 ASP267 THR268 ASP269 VAL270 LEU271 ALA272 ASP273 ALA274 CYS275 TRP276 ALA277 LEU278 SER279 TYR280 LEU281 SER282 ASP283 GLY284 PRO285 ASN286 ASP287 LYS288 ILE289 GLN290 ALA291 VAL292 ILE293 ASP294 ALA295 GLY296 VAL297 CYS298 ARG299 ARG300 LEU301 VAL302 GLU303 LEU304 LEU305 MET306 HIS307 ASN308 ASP309 TYR310 LYS311 VAL312 VAL313 SER314 PRO315 ALA316 LEU317 ARG318 ALA319 VAL320 GLY321 ASN322 ILE323 VAL324 THR325 GLY326 ASP327 ASP328 ILE329 GLN330 THR331 GLN332 VAL333 ILE334 LEU335 ASN336 CYS337 SER338 ALA339 LEU340 GLN341 SER342 LEU343 LEU344 HIS345 LEU346 LEU347 SER348 SER349 PRO350 LYS351 GLU352 SER353 ILE354 LYS355 LYS356 GLU357 ALA358 CYS359 TRP360 THR361 ILE362 SER363 ASN364 ILE365 THR366 ALA367 GLY368 ASN369 ARG370 ALA371 GLN372 ILE373 GLN374 THR375 VAL376 ILE377 ASP378 ALA379 ASN380 ILE381 PHE382 PRO383 ALA384 LEU385 ILE386 SER387 ILE388 LEU389 GLN390 THR391 ALA392 GLU393 PHE394 ARG395 THR396 ARG397 LYS398 GLU399 ALA400 ALA401 TRP402 ALA403 ILE404 THR405 ASN406 ALA407 THR408 SER409 GLY410 GLY411 SER412 ALA413 GLU414 GLN415 ILE416 LYS417 TYR418 LEU419 VAL420 GLU421 LEU422 GLY423 CYS424 ILE425 LYS426 PRO427 LEU428 CYS429 ASP430 LEU431 LEU432 THR433 VAL434 MET435 ASP436 SER437 LYS438 ILE439 VAL440 GLN441 VAL442 ALA443 LEU444 ASN445 GLY446 LEU447 GLU448 ASN449 ILE450 LEU451 ARG452 LEU453 GLY454 GLU455 GLN456 GLU457 ALA458 LYS459 ARG460 ASN461 GLY462 THR463 GLY464 ILE465 ASN466 PRO467 TYR468 CYS469 ALA470 LEU471 ILE472 GLU473 GLU474 ALA475 TYR476 GLY477 LEU478 ASP479 LYS480 ILE481 GLU482 PHE483 LEU484 GLN485 SER486 HIS487 GLU488 ASN489 GLN490 GLU491 ILE492 TYR493 GLN494 LYS495 ALA496 PHE497 ASP498 LEU499 ILE500 GLU501 HIS502 TYR503 PHE504 GLY505 THR506 GLU507
Unit 2 THR84 SER85 ASP86 MET87 ILE88 GLU89 MET90 ILE91 PHE92 SER93 LYS94 SER95 PRO96 GLU97 GLN98 GLN99 LEU100 SER101 ALA102 THR103 GLN104 LYS105 PHE106 ARG107 LYS108 LEU109 LEU110 SER111 LYS112 GLU113 PRO114 ASN115 PRO116 PRO117 ILE118 ASP119 GLU120 VAL121 ILE122 SER123 THR124 PRO125 GLY126 VAL127 VAL128 ALA129 ARG130 PHE131 VAL132 GLU133 PHE134 LEU135 LYS136 ARG137 LYS138 GLU139 ASN140 CYS141 THR142 LEU143 GLN144 PHE145 GLU146 SER147 ALA148 TRP149 VAL150 LEU151 THR152 ASN153 ILE154 ALA155 SER156 GLY157 ASN158 SER159 LEU160 GLN161 THR162 ARG163 ILE164 VAL165 ILE166 GLN167 ALA168 GLY169 ALA170 VAL171 PRO172 ILE173 PHE174 ILE175 GLU176 LEU177 LEU178 SER179 SER180 GLU181 PHE182 GLU183 ASP184 VAL185 GLN186 GLU187 GLN188 ALA189 VAL190 TRP191 ALA192 LEU193 GLY194 ASN195 ILE196 ALA197 GLY198 ASP199 SER200 THR201 MET202 CYS203 ARG204 ASP205 TYR206 VAL207 LEU208 ASP209 CYS210 ASN211 ILE212 LEU213 PRO214 PRO215 LEU216 LEU217 GLN218 LEU219 PHE220 SER221 LYS222 GLN223 ASN224 ARG225 LEU226 THR227 MET228 THR229 ARG230 ASN231 ALA232 VAL233 TRP234 ALA235 LEU236 SER237 ASN238 LEU239 CYS240 ARG241 GLY242 LYS243 SER244 PRO245 PRO246 PRO247 GLU248 PHE249 ALA250 LYS251 VAL252 SER253 PRO254 CYS255 LEU256 ASN257 VAL258 LEU259 SER260 TRP261 LEU262 LEU263 PHE264 VAL265 SER266 ASP267 THR268 ASP269 VAL270 LEU271 ALA272 ASP273 ALA274 CYS275 TRP276 ALA277 LEU278 SER279 TYR280 LEU281 SER282 ASP283 GLY284 PRO285 ASN286 ASP287 LYS288 ILE289 GLN290 ALA291 VAL292 ILE293 ASP294 ALA295 GLY296 VAL297 CYS298 ARG299 ARG300 LEU301 VAL302 GLU303 LEU304 LEU305 MET306 HIS307 ASN308 ASP309 TYR310 LYS311 VAL312 VAL313 SER314 PRO315 ALA316 LEU317 ARG318 ALA319 VAL320 GLY321 ASN322 ILE323 VAL324 THR325 GLY326 ASP327 ASP328 ILE329 GLN330 THR331 GLN332 VAL333 ILE334 LEU335 ASN336 CYS337 SER338 ALA339 LEU340 GLN341 SER342 LEU343 LEU344 HIS345 LEU346 LEU347 SER348 SER349 PRO350 LYS351 GLU352 SER353 ILE354 LYS355 LYS356 GLU357 ALA358 CYS359 TRP360 THR361 ILE362 SER363 ASN364 ILE365 THR366 ALA367 GLY368 ASN369 ARG370 ALA371 GLN372 ILE373 GLN374 THR375 VAL376 ILE377 ASP378 ALA379 ASN380 ILE381 PHE382 PRO383 ALA384 LEU385 ILE386 SER387 ILE388 LEU389 GLN390 THR391 ALA392 GLU393 PHE394 ARG395 THR396 ARG397 LYS398 GLU399 ALA400 ALA401 TRP402 ALA403 ILE404 THR405 ASN406 ALA407 THR408 SER409 GLY410 GLY411 SER412 ALA413 GLU414 GLN415 ILE416 LYS417 TYR418 LEU419 VAL420 GLU421 LEU422 GLY423 CYS424 ILE425 LYS426 PRO427 LEU428 CYS429 ASP430 LEU431 LEU432 THR433 VAL434 MET435 ASP436 SER437 LYS438 ILE439 VAL440 GLN441 VAL442 ALA443 LEU444 ASN445 GLY446 LEU447 GLU448 ASN449 ILE450 LEU451 ARG452 LEU453 GLY454 GLU455 GLN456 GLU457 ALA458 LYS459 ARG460 ASN461 GLY462 THR463 GLY464 ILE465 ASN466 PRO467 TYR468 CYS469 ALA470 LEU471 ILE472 GLU473 GLU474 ALA475 TYR476 GLY477 LEU478 ASP479 LYS480 ILE481 GLU482 PHE483 LEU484 GLN485 SER486 HIS487 GLU488 ASN489 GLN490 GLU491 ILE492 TYR493 GLN494 LYS495 ALA496 PHE497 ASP498 LEU499 ILE500 GLU501 HIS502 TYR503 PHE504 GLY505 THR506 GLU507 ASP508 GLU509
Unit 3 SER688 ALA689 VAL690 LEU691 ARG692 GLY693 PHE694 LEU695 ILE696 LEU697 GLY698 LYS699 GLU700 ASP701 ARG702 ARG703 TYR704 GLY705 PRO706 ALA707 LEU708 SER709 ILE710 ASN711 GLU712 LEU713 SER714 ASN715 LEU716 ALA717 LYS718 GLY719 GLU720 LYS721 ALA722 ASN723 VAL724 LEU725 ILE726 GLY727 GLN728 GLY729 ASP730 VAL731 VAL732 LEU733 VAL734 MET735 LYS736 ARG737 LYS738 ARG739 ASP740 SER741 GLN748 THR749 ALA750 THR751 LYS752 ARG753 ILE754 ARG755 MET756
Unit 4 VAL686 GLU687 SER688 ALA689 VAL690 LEU691 ARG692 GLY693 PHE694 LEU695 ILE696 LEU697 GLY698 LYS699 GLU700 ASP701 ARG702 ARG703 TYR704 GLY705 PRO706 ALA707 LEU708 SER709 ILE710 ASN711 GLU712 LEU713 SER714 ASN715 LEU716 ALA717 LYS718 GLY719 GLU720 LYS721 ALA722 ASN723 VAL724 LEU725 ILE726 GLY727 GLN728 GLY729 ASP730 VAL731 VAL732 LEU733 VAL734 MET735 LYS736 ARG737 LYS738 ARG739 ASP740 SER741 THR749 ALA750 THR751 LYS752 ARG753 ILE754 ARG755 MET756 ALA757
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany