2DG5 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GAMMA-GLUTAMYL TRANSPEPTIDASE FROM ESCH COLI IN COMPLEX WITH HYDROLYZED GLUTATHIONE
• Keywords: GAMMA-GLUTAMYLTRANSFERASE, GGT, GAMMA-GT, GLUTATHIONE, TRANS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2DG5	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	A	351	2573	88
2	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	B	190	1367	40
3	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	C	351	2573	88
4	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	D	190	1367	40
5	Ligand	GAMMA-GLUTAMYLTRANSPEPTIDASE	A	1	0	6
6	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	B	2	0	11
7	Protein	GAMMA-GLUTAMYLTRANSPEPTIDASE	D	2	0	11
8	Water			867	0	867
total				1954	7880	1151

Proteins

Unit 1	GLU 37 GLU 38 ASP 39 VAL 40 PHE 41 HIS 42 PRO 43 VAL 44 ARG 45 ALA 46 LYS 47 GLN 48 GLY 49 MSE 50 VAL 51 ALA 52 SER 53 VAL 54 ASP 55 ALA 56 THR 57 ALA 58 THR 59 GLN 60 VAL 61 GLY 62 VAL 63 ASP 64 ILE 65 LEU 66 LYS 67 GLU 68 GLY 69 GLY 70 ASN 71 ALA 72 VAL 73 ASP 74 ALA 75 ALA 76 VAL 77 ALA 78 VAL 79 GLY 80 TYR 81 ALA 82 LEU 83 ALA 84 VAL 85 THR 86 HIS 87 PRO 88 GLN 89 ALA 90 GLY 91 ASN 92 LEU 93 GLY 94 GLY 95 GLY 96 GLY 97 PHE 98 MSE 99 LEU 100 ILE 101 ARG 102 SER 103 LYS 104 ASN 105 GLY 106 ASN 107 THR 108 THR 109 ALA 110 ILE 111 ASP 112 PHE 113 ARG 114 GLU 115 MSE 116 ALA 117 PRO 118 ALA 119 LYS 120 ALA 121 THR 122 ARG 123 ASP 124 MSE 125 PHE 126 LEU 127 ASP 128 ASP 129 GLN 130 GLY 131 ASN 132 PRO 133 ASP 134 SER 135 LYS 136 LYS 137 SER 138 LEU 139 THR 140 SER 141 HIS 142 LEU 143 ALA 144 SER 145 GLY 146 THR 147 PRO 148 GLY 149 THR 150 VAL 151 ALA 152 GLY 153 PHE 154 SER 155 LEU 156 ALA 157 LEU 158 ASP 159 LYS 160 TYR 161 GLY 162 THR 163 MSE 164 PRO 165 LEU 166 ASN 167 LYS 168 VAL 169 VAL 170 GLN 171 PRO 172 ALA 173 PHE 174 LYS 175 LEU 176 ALA 177 ARG 178 ASP 179 GLY 180 PHE 181 ILE 182 VAL 183 ASN 184 ASP 185 ALA 186 LEU 187 ALA 188 ASP 189 ASP 190 LEU 191 LYS 192 THR 193 TYR 194 GLY 195 SER 196 GLU 197 VAL 198 LEU 199 PRO 200 ASN 201 HIS 202 GLU 203 ASN 204 SER 205 LYS 206 ALA 207 ILE 208 PHE 209 TRP 210 LYS 211 GLU 212 GLY 213 GLU 214 PRO 215 LEU 216 LYS 217 LYS 218 GLY 219 ASP 220 THR 221 LEU 222 VAL 223 GLN 224 ALA 225 ASN 226 LEU 227 ALA 228 LYS 229 SER 230 LEU 231 GLU 232 MSE 233 ILE 234 ALA 235 GLU 236 ASN 237 GLY 238 PRO 239 ASP 240 GLU 241 PHE 242 TYR 243 LYS 244 GLY 245 THR 246 ILE 247 ALA 248 GLU 249 GLN 250 ILE 251 ALA 252 GLN 253 GLU 254 MSE 255 GLN 256 LYS 257 ASN 258 GLY 259 GLY 260 LEU 261 ILE 262 THR 263 LYS 264 GLU 265 ASP 266 LEU 267 ALA 268 ALA 269 TYR 270 LYS 271 ALA 272 VAL 273 GLU 274 ARG 275 THR 276 PRO 277 ILE 278 SER 279 GLY 280 ASP 281 TYR 282 ARG 283 GLY 284 TYR 285 GLN 286 VAL 287 TYR 288 SER 289 MSE 290 PRO 291 PRO 292 PRO 293 SER 294 SER 295 GLY 296 GLY 297 ILE 298 HIS 299 ILE 300 VAL 301 GLN 302 ILE 303 LEU 304 ASN 305 ILE 306 LEU 307 GLU 308 ASN 309 PHE 310 ASP 311 MSE 312 LYS 313 LYS 314 TYR 315 GLY 316 PHE 317 GLY 318 SER 319 ALA 320 ASP 321 ALA 322 MSE 323 GLN 324 ILE 325 MSE 326 ALA 327 GLU 328 ALA 329 GLU 330 LYS 331 TYR 332 ALA 333 TYR 334 ALA 335 ASP 336 ARG 337 SER 338 GLU 339 TYR 340 LEU 341 GLY 342 ASP 343 PRO 344 ASP 345 PHE 346 VAL 347 LYS 348 VAL 349 PRO 350 TRP 351 GLN 352 ALA 353 LEU 354 THR 355 ASN 356 LYS 357 ALA 358 TYR 359 ALA 360 LYS 361 SER 362 ILE 363 ALA 364 ASP 365 GLN 366 ILE 367 ASP 368 ILE 369 ASN 370 LYS 371 ALA 372 LYS 373 PRO 374 SER 375 SER 376 GLU 377 ILE 378 ARG 379 PRO 380 GLY 381 LYS 382 LEU 383 ALA 384 PRO 385 TYR 386 GLU 387
Unit 2	THR 391 THR 392 HIS 393 TYR 394 SER 395 VAL 396 VAL 397 ASP 398 LYS 399 ASP 400 GLY 401 ASN 402 ALA 403 VAL 404 ALA 405 VAL 406 THR 407 TYR 408 THR 409 LEU 410 ASN 411 THR 412 THR 413 PHE 414 GLY 415 THR 416 GLY 417 ILE 418 VAL 419 ALA 420 GLY 421 GLU 422 SER 423 GLY 424 ILE 425 LEU 426 LEU 427 ASN 428 ASN 429 GLN 430 MSE 431 ASP 432 ASP 433 PHE 434 SER 435 ALA 436 LYS 437 PRO 438 GLY 439 VAL 440 PRO 441 ASN 442 VAL 443 TYR 444 GLY 445 LEU 446 VAL 447 GLY 448 GLY 449 ASP 450 ALA 451 ASN 452 ALA 453 VAL 454 GLY 455 PRO 456 ASN 457 LYS 458 ARG 459 PRO 460 LEU 461 SER 462 SER 463 MSE 464 SER 465 PRO 466 THR 467 ILE 468 VAL 469 VAL 470 LYS 471 ASP 472 GLY 473 LYS 474 THR 475 TRP 476 LEU 477 VAL 478 THR 479 GLY 480 SER 481 PRO 482 GLY 483 GLY 484 SER 485 ARG 486 ILE 487 ILE 488 THR 489 THR 490 VAL 491 LEU 492 GLN 493 MSE 494 VAL 495 VAL 496 ASN 497 SER 498 ILE 499 ASP 500 TYR 501 GLY 502 LEU 503 ASN 504 VAL 505 ALA 506 GLU 507 ALA 508 THR 509 ASN 510 ALA 511 PRO 512 ARG 513 PHE 514 HIS 515 HIS 516 GLN 517 TRP 518 LEU 519 PRO 520 ASP 521 GLU 522 LEU 523 ARG 524 VAL 525 GLU 526 LYS 527 GLY 528 PHE 529 SER 530 PRO 531 ASP 532 THR 533 LEU 534 LYS 535 LEU 536 LEU 537 GLU 538 ALA 539 LYS 540 GLY 541 GLN 542 LYS 543 VAL 544 ALA 545 LEU 546 LYS 547 GLU 548 ALA 549 MSE 550 GLY 551 SER 552 THR 553 GLN 554 SER 555 ILE 556 MSE 557 VAL 558 GLY 559 PRO 560 ASP 561 GLY 562 GLU 563 LEU 564 TYR 565 GLY 566 ALA 567 SER 568 ASP 569 PRO 570 ARG 571 SER 572 VAL 573 ASP 574 ASP 575 LEU 576 THR 577 ALA 578 GLY 579 TYR 580
Unit 3	GLU 37 GLU 38 ASP 39 VAL 40 PHE 41 HIS 42 PRO 43 VAL 44 ARG 45 ALA 46 LYS 47 GLN 48 GLY 49 MSE 50 VAL 51 ALA 52 SER 53 VAL 54 ASP 55 ALA 56 THR 57 ALA 58 THR 59 GLN 60 VAL 61 GLY 62 VAL 63 ASP 64 ILE 65 LEU 66 LYS 67 GLU 68 GLY 69 GLY 70 ASN 71 ALA 72 VAL 73 ASP 74 ALA 75 ALA 76 VAL 77 ALA 78 VAL 79 GLY 80 TYR 81 ALA 82 LEU 83 ALA 84 VAL 85 THR 86 HIS 87 PRO 88 GLN 89 ALA 90 GLY 91 ASN 92 LEU 93 GLY 94 GLY 95 GLY 96 GLY 97 PHE 98 MSE 99 LEU 100 ILE 101 ARG 102 SER 103 LYS 104 ASN 105 GLY 106 ASN 107 THR 108 THR 109 ALA 110 ILE 111 ASP 112 PHE 113 ARG 114 GLU 115 MSE 116 ALA 117 PRO 118 ALA 119 LYS 120 ALA 121 THR 122 ARG 123 ASP 124 MSE 125 PHE 126 LEU 127 ASP 128 ASP 129 GLN 130 GLY 131 ASN 132 PRO 133 ASP 134 SER 135 LYS 136 LYS 137 SER 138 LEU 139 THR 140 SER 141 HIS 142 LEU 143 ALA 144 SER 145 GLY 146 THR 147 PRO 148 GLY 149 THR 150 VAL 151 ALA 152 GLY 153 PHE 154 SER 155 LEU 156 ALA 157 LEU 158 ASP 159 LYS 160 TYR 161 GLY 162 THR 163 MSE 164 PRO 165 LEU 166 ASN 167 LYS 168 VAL 169 VAL 170 GLN 171 PRO 172 ALA 173 PHE 174 LYS 175 LEU 176 ALA 177 ARG 178 ASP 179 GLY 180 PHE 181 ILE 182 VAL 183 ASN 184 ASP 185 ALA 186 LEU 187 ALA 188 ASP 189 ASP 190 LEU 191 LYS 192 THR 193 TYR 194 GLY 195 SER 196 GLU 197 VAL 198 LEU 199 PRO 200 ASN 201 HIS 202 GLU 203 ASN 204 SER 205 LYS 206 ALA 207 ILE 208 PHE 209 TRP 210 LYS 211 GLU 212 GLY 213 GLU 214 PRO 215 LEU 216 LYS 217 LYS 218 GLY 219 ASP 220 THR 221 LEU 222 VAL 223 GLN 224 ALA 225 ASN 226 LEU 227 ALA 228 LYS 229 SER 230 LEU 231 GLU 232 MSE 233 ILE 234 ALA 235 GLU 236 ASN 237 GLY 238 PRO 239 ASP 240 GLU 241 PHE 242 TYR 243 LYS 244 GLY 245 THR 246 ILE 247 ALA 248 GLU 249 GLN 250 ILE 251 ALA 252 GLN 253 GLU 254 MSE 255 GLN 256 LYS 257 ASN 258 GLY 259 GLY 260 LEU 261 ILE 262 THR 263 LYS 264 GLU 265 ASP 266 LEU 267 ALA 268 ALA 269 TYR 270 LYS 271 ALA 272 VAL 273 GLU 274 ARG 275 THR 276 PRO 277 ILE 278 SER 279 GLY 280 ASP 281 TYR 282 ARG 283 GLY 284 TYR 285 GLN 286 VAL 287 TYR 288 SER 289 MSE 290 PRO 291 PRO 292 PRO 293 SER 294 SER 295 GLY 296 GLY 297 ILE 298 HIS 299 ILE 300 VAL 301 GLN 302 ILE 303 LEU 304 ASN 305 ILE 306 LEU 307 GLU 308 ASN 309 PHE 310 ASP 311 MSE 312 LYS 313 LYS 314 TYR 315 GLY 316 PHE 317 GLY 318 SER 319 ALA 320 ASP 321 ALA 322 MSE 323 GLN 324 ILE 325 MSE 326 ALA 327 GLU 328 ALA 329 GLU 330 LYS 331 TYR 332 ALA 333 TYR 334 ALA 335 ASP 336 ARG 337 SER 338 GLU 339 TYR 340 LEU 341 GLY 342 ASP 343 PRO 344 ASP 345 PHE 346 VAL 347 LYS 348 VAL 349 PRO 350 TRP 351 GLN 352 ALA 353 LEU 354 THR 355 ASN 356 LYS 357 ALA 358 TYR 359 ALA 360 LYS 361 SER 362 ILE 363 ALA 364 ASP 365 GLN 366 ILE 367 ASP 368 ILE 369 ASN 370 LYS 371 ALA 372 LYS 373 PRO 374 SER 375 SER 376 GLU 377 ILE 378 ARG 379 PRO 380 GLY 381 LYS 382 LEU 383 ALA 384 PRO 385 TYR 386 GLU 387
Unit 4	THR 391 THR 392 HIS 393 TYR 394 SER 395 VAL 396 VAL 397 ASP 398 LYS 399 ASP 400 GLY 401 ASN 402 ALA 403 VAL 404 ALA 405 VAL 406 THR 407 TYR 408 THR 409 LEU 410 ASN 411 THR 412 THR 413 PHE 414 GLY 415 THR 416 GLY 417 ILE 418 VAL 419 ALA 420 GLY 421 GLU 422 SER 423 GLY 424 ILE 425 LEU 426 LEU 427 ASN 428 ASN 429 GLN 430 MSE 431 ASP 432 ASP 433 PHE 434 SER 435 ALA 436 LYS 437 PRO 438 GLY 439 VAL 440 PRO 441 ASN 442 VAL 443 TYR 444 GLY 445 LEU 446 VAL 447 GLY 448 GLY 449 ASP 450 ALA 451 ASN 452 ALA 453 VAL 454 GLY 455 PRO 456 ASN 457 LYS 458 ARG 459 PRO 460 LEU 461 SER 462 SER 463 MSE 464 SER 465 PRO 466 THR 467 ILE 468 VAL 469 VAL 470 LYS 471 ASP 472 GLY 473 LYS 474 THR 475 TRP 476 LEU 477 VAL 478 THR 479 GLY 480 SER 481 PRO 482 GLY 483 GLY 484 SER 485 ARG 486 ILE 487 ILE 488 THR 489 THR 490 VAL 491 LEU 492 GLN 493 MSE 494 VAL 495 VAL 496 ASN 497 SER 498 ILE 499 ASP 500 TYR 501 GLY 502 LEU 503 ASN 504 VAL 505 ALA 506 GLU 507 ALA 508 THR 509 ASN 510 ALA 511 PRO 512 ARG 513 PHE 514 HIS 515 HIS 516 GLN 517 TRP 518 LEU 519 PRO 520 ASP 521 GLU 522 LEU 523 ARG 524 VAL 525 GLU 526 LYS 527 GLY 528 PHE 529 SER 530 PRO 531 ASP 532 THR 533 LEU 534 LYS 535 LEU 536 LEU 537 GLU 538 ALA 539 LYS 540 GLY 541 GLN 542 LYS 543 VAL 544 ALA 545 LEU 546 LYS 547 GLU 548 ALA 549 MSE 550 GLY 551 SER 552 THR 553 GLN 554 SER 555 ILE 556 MSE 557 VAL 558 GLY 559 PRO 560 ASP 561 GLY 562 GLU 563 LEU 564 TYR 565 GLY 566 ALA 567 SER 568 ASP 569 PRO 570 ARG 571 SER 572 VAL 573 ASP 574 ASP 575 LEU 576 THR 577 ALA 578 GLY 579 TYR 580
Unit 6	GLU 601 CA 701
Unit 7	GLU 602 CA 702

Ligands

Unit 5

GOL 703