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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF COBALAMIN-COMPLEXED BOVINE TRANSCOBALAMIN IN MO CRYSTAL FORM
Keywords ALPHA_6 - ALPHA_6 BARREL, TRANSPORT PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2BB6     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCOBALAMIN II  A 414 3254 0
2  Protein   TRANSCOBALAMIN II  B 414 3254 0
3  Protein   TRANSCOBALAMIN II  C 414 3254 0
4  Protein   TRANSCOBALAMIN II  D 414 3254 0
5  Ligand   TRANSCOBALAMIN II  A 2 0 92
6  Ligand   TRANSCOBALAMIN II  B 2 0 92
7  Ligand   TRANSCOBALAMIN II  C 2 0 92
8  Ligand   TRANSCOBALAMIN II  D 2 0 92
9 Water     764 0 764
total       2428 13016 1132
Proteins
Unit 1 ASN1 ILE2 CYS3 GLU4 ILE5 THR6 GLU7 VAL8 ASP9 SER10 THR11 LEU12 VAL13 GLU14 ARG15 LEU16 GLY17 GLN18 ARG19 LEU20 LEU21 PRO22 TRP23 MET24 ASP25 ARG26 LEU27 SER28 GLN29 GLU30 GLN31 LEU32 ASN33 PRO34 SER35 ILE36 TYR37 VAL38 GLY39 LEU40 ARG41 LEU42 SER43 SER44 LEU45 GLN46 ALA47 GLY48 ALA49 LYS50 GLU51 ALA52 HIS53 TYR54 LEU55 HIS56 SER57 LEU58 LYS59 LEU60 SER61 TYR62 GLN63 GLN64 SER65 LEU66 LEU67 ARG68 PRO69 ALA70 SER71 ASN72 LYS73 ASP74 ASP75 ASN76 ASP77 SER78 GLU79 ALA80 LYS81 PRO82 SER83 MET84 GLY85 GLN86 LEU87 ALA88 LEU89 TYR90 LEU91 LEU92 ALA93 LEU94 ARG95 ALA96 ASN97 CYS98 GLU99 PHE100 ILE101 GLY102 GLY103 ARG104 LYS105 GLY106 ASP107 ARG108 LEU109 VAL110 SER111 GLN112 LEU113 LYS114 ARG115 PHE116 LEU117 GLU118 ASP119 GLU120 LYS121 ARG122 ALA123 ILE124 GLY125 HIS126 ASN127 HIS128 GLN129 GLY130 HIS131 PRO132 ARG133 THR134 SER135 TYR136 TYR137 GLN138 TYR139 SER140 LEU141 GLY142 ILE143 LEU144 ALA145 LEU146 CYS147 VAL148 HIS149 GLN150 LYS151 ARG152 VAL153 HIS154 ASP155 SER156 VAL157 VAL158 GLY159 LYS160 LEU161 LEU162 TYR163 ALA164 VAL165 GLU166 HIS167 LYS168 PRO169 HIS170 LEU171 LEU172 GLN173 ASP174 HIS175 VAL176 SER177 VAL178 ASP179 THR180 MET181 ALA182 MET183 ALA184 GLY185 MET186 ALA187 PHE188 SER189 CYS190 LEU191 GLU192 LEU193 SER194 ASN195 LEU196 ASN197 PRO198 LYS199 GLN200 ARG201 ASN202 ARG203 ILE204 ASN205 LEU206 ALA207 LEU208 LYS209 ARG210 VAL211 GLN212 GLU213 LYS214 ILE215 LEU216 LYS217 ALA218 GLN219 THR220 PRO221 GLU222 GLY223 TYR224 PHE225 GLY226 ASN227 VAL228 TYR229 SER230 THR231 PRO232 LEU233 ALA234 LEU235 GLN236 LEU237 LEU238 MET239 GLY240 SER241 LEU242 ARG243 PRO244 SER245 VAL246 GLU247 LEU248 GLY249 THR250 ALA251 CYS252 LEU253 LYS254 ALA255 LYS256 ALA257 ALA258 LEU259 GLN260 ALA261 SER262 LEU263 GLN264 HIS265 LYS266 THR267 PHE268 GLN269 ASN270 PRO271 LEU272 MET273 ILE274 SER275 GLN276 LEU277 LEU278 PRO279 VAL280 LEU281 ASN282 GLN283 LYS284 SER285 TYR286 VAL287 ASP288 LEU289 ILE290 SER291 PRO292 ASP293 CYS294 GLN295 ALA296 PRO297 ARG298 ALA299 LEU300 LEU301 GLU302 PRO303 ALA304 LEU305 GLU306 THR307 PRO308 PRO309 GLN310 ALA311 LYS312 VAL313 PRO314 LYS315 PHE316 ILE317 ASP318 VAL319 LEU320 LEU321 LYS322 VAL323 SER324 GLY325 ILE326 SER327 PRO328 SER329 TYR330 ARG331 HIS332 SER333 VAL334 SER335 VAL336 PRO337 ALA338 GLY339 SER340 SER341 LEU342 GLU343 ASP344 ILE345 LEU346 LYS347 ASN348 ALA349 GLN350 GLU351 HIS352 GLY353 ARG354 PHE355 ARG356 PHE357 ARG358 THR359 GLN360 ALA361 SER362 LEU363 SER364 GLY365 PRO366 PHE367 LEU368 THR369 SER370 VAL371 LEU372 GLY373 ARG374 LYS375 ALA376 GLY377 GLU378 ARG379 GLU380 PHE381 TRP382 GLN383 VAL384 LEU385 ARG386 ASP387 PRO388 ASP389 THR390 PRO391 LEU392 GLN393 GLN394 GLY395 ILE396 ALA397 ASP398 TYR399 ARG400 PRO401 LYS402 ASP403 GLY404 GLU405 THR406 ILE407 GLU408 LEU409 ARG410 LEU411 VAL412 GLY413 TRP414
Unit 2 ASN1 ILE2 CYS3 GLU4 ILE5 THR6 GLU7 VAL8 ASP9 SER10 THR11 LEU12 VAL13 GLU14 ARG15 LEU16 GLY17 GLN18 ARG19 LEU20 LEU21 PRO22 TRP23 MET24 ASP25 ARG26 LEU27 SER28 GLN29 GLU30 GLN31 LEU32 ASN33 PRO34 SER35 ILE36 TYR37 VAL38 GLY39 LEU40 ARG41 LEU42 SER43 SER44 LEU45 GLN46 ALA47 GLY48 ALA49 LYS50 GLU51 ALA52 HIS53 TYR54 LEU55 HIS56 SER57 LEU58 LYS59 LEU60 SER61 TYR62 GLN63 GLN64 SER65 LEU66 LEU67 ARG68 PRO69 ALA70 SER71 ASN72 LYS73 ASP74 ASP75 ASN76 ASP77 SER78 GLU79 ALA80 LYS81 PRO82 SER83 MET84 GLY85 GLN86 LEU87 ALA88 LEU89 TYR90 LEU91 LEU92 ALA93 LEU94 ARG95 ALA96 ASN97 CYS98 GLU99 PHE100 ILE101 GLY102 GLY103 ARG104 LYS105 GLY106 ASP107 ARG108 LEU109 VAL110 SER111 GLN112 LEU113 LYS114 ARG115 PHE116 LEU117 GLU118 ASP119 GLU120 LYS121 ARG122 ALA123 ILE124 GLY125 HIS126 ASN127 HIS128 GLN129 GLY130 HIS131 PRO132 ARG133 THR134 SER135 TYR136 TYR137 GLN138 TYR139 SER140 LEU141 GLY142 ILE143 LEU144 ALA145 LEU146 CYS147 VAL148 HIS149 GLN150 LYS151 ARG152 VAL153 HIS154 ASP155 SER156 VAL157 VAL158 GLY159 LYS160 LEU161 LEU162 TYR163 ALA164 VAL165 GLU166 HIS167 LYS168 PRO169 HIS170 LEU171 LEU172 GLN173 ASP174 HIS175 VAL176 SER177 VAL178 ASP179 THR180 MET181 ALA182 MET183 ALA184 GLY185 MET186 ALA187 PHE188 SER189 CYS190 LEU191 GLU192 LEU193 SER194 ASN195 LEU196 ASN197 PRO198 LYS199 GLN200 ARG201 ASN202 ARG203 ILE204 ASN205 LEU206 ALA207 LEU208 LYS209 ARG210 VAL211 GLN212 GLU213 LYS214 ILE215 LEU216 LYS217 ALA218 GLN219 THR220 PRO221 GLU222 GLY223 TYR224 PHE225 GLY226 ASN227 VAL228 TYR229 SER230 THR231 PRO232 LEU233 ALA234 LEU235 GLN236 LEU237 LEU238 MET239 GLY240 SER241 LEU242 ARG243 PRO244 SER245 VAL246 GLU247 LEU248 GLY249 THR250 ALA251 CYS252 LEU253 LYS254 ALA255 LYS256 ALA257 ALA258 LEU259 GLN260 ALA261 SER262 LEU263 GLN264 HIS265 LYS266 THR267 PHE268 GLN269 ASN270 PRO271 LEU272 MET273 ILE274 SER275 GLN276 LEU277 LEU278 PRO279 VAL280 LEU281 ASN282 GLN283 LYS284 SER285 TYR286 VAL287 ASP288 LEU289 ILE290 SER291 PRO292 ASP293 CYS294 GLN295 ALA296 PRO297 ARG298 ALA299 LEU300 LEU301 GLU302 PRO303 ALA304 LEU305 GLU306 THR307 PRO308 PRO309 GLN310 ALA311 LYS312 VAL313 PRO314 LYS315 PHE316 ILE317 ASP318 VAL319 LEU320 LEU321 LYS322 VAL323 SER324 GLY325 ILE326 SER327 PRO328 SER329 TYR330 ARG331 HIS332 SER333 VAL334 SER335 VAL336 PRO337 ALA338 GLY339 SER340 SER341 LEU342 GLU343 ASP344 ILE345 LEU346 LYS347 ASN348 ALA349 GLN350 GLU351 HIS352 GLY353 ARG354 PHE355 ARG356 PHE357 ARG358 THR359 GLN360 ALA361 SER362 LEU363 SER364 GLY365 PRO366 PHE367 LEU368 THR369 SER370 VAL371 LEU372 GLY373 ARG374 LYS375 ALA376 GLY377 GLU378 ARG379 GLU380 PHE381 TRP382 GLN383 VAL384 LEU385 ARG386 ASP387 PRO388 ASP389 THR390 PRO391 LEU392 GLN393 GLN394 GLY395 ILE396 ALA397 ASP398 TYR399 ARG400 PRO401 LYS402 ASP403 GLY404 GLU405 THR406 ILE407 GLU408 LEU409 ARG410 LEU411 VAL412 GLY413 TRP414
Unit 3 ASN1 ILE2 CYS3 GLU4 ILE5 THR6 GLU7 VAL8 ASP9 SER10 THR11 LEU12 VAL13 GLU14 ARG15 LEU16 GLY17 GLN18 ARG19 LEU20 LEU21 PRO22 TRP23 MET24 ASP25 ARG26 LEU27 SER28 GLN29 GLU30 GLN31 LEU32 ASN33 PRO34 SER35 ILE36 TYR37 VAL38 GLY39 LEU40 ARG41 LEU42 SER43 SER44 LEU45 GLN46 ALA47 GLY48 ALA49 LYS50 GLU51 ALA52 HIS53 TYR54 LEU55 HIS56 SER57 LEU58 LYS59 LEU60 SER61 TYR62 GLN63 GLN64 SER65 LEU66 LEU67 ARG68 PRO69 ALA70 SER71 ASN72 LYS73 ASP74 ASP75 ASN76 ASP77 SER78 GLU79 ALA80 LYS81 PRO82 SER83 MET84 GLY85 GLN86 LEU87 ALA88 LEU89 TYR90 LEU91 LEU92 ALA93 LEU94 ARG95 ALA96 ASN97 CYS98 GLU99 PHE100 ILE101 GLY102 GLY103 ARG104 LYS105 GLY106 ASP107 ARG108 LEU109 VAL110 SER111 GLN112 LEU113 LYS114 ARG115 PHE116 LEU117 GLU118 ASP119 GLU120 LYS121 ARG122 ALA123 ILE124 GLY125 HIS126 ASN127 HIS128 GLN129 GLY130 HIS131 PRO132 ARG133 THR134 SER135 TYR136 TYR137 GLN138 TYR139 SER140 LEU141 GLY142 ILE143 LEU144 ALA145 LEU146 CYS147 VAL148 HIS149 GLN150 LYS151 ARG152 VAL153 HIS154 ASP155 SER156 VAL157 VAL158 GLY159 LYS160 LEU161 LEU162 TYR163 ALA164 VAL165 GLU166 HIS167 LYS168 PRO169 HIS170 LEU171 LEU172 GLN173 ASP174 HIS175 VAL176 SER177 VAL178 ASP179 THR180 MET181 ALA182 MET183 ALA184 GLY185 MET186 ALA187 PHE188 SER189 CYS190 LEU191 GLU192 LEU193 SER194 ASN195 LEU196 ASN197 PRO198 LYS199 GLN200 ARG201 ASN202 ARG203 ILE204 ASN205 LEU206 ALA207 LEU208 LYS209 ARG210 VAL211 GLN212 GLU213 LYS214 ILE215 LEU216 LYS217 ALA218 GLN219 THR220 PRO221 GLU222 GLY223 TYR224 PHE225 GLY226 ASN227 VAL228 TYR229 SER230 THR231 PRO232 LEU233 ALA234 LEU235 GLN236 LEU237 LEU238 MET239 GLY240 SER241 LEU242 ARG243 PRO244 SER245 VAL246 GLU247 LEU248 GLY249 THR250 ALA251 CYS252 LEU253 LYS254 ALA255 LYS256 ALA257 ALA258 LEU259 GLN260 ALA261 SER262 LEU263 GLN264 HIS265 LYS266 THR267 PHE268 GLN269 ASN270 PRO271 LEU272 MET273 ILE274 SER275 GLN276 LEU277 LEU278 PRO279 VAL280 LEU281 ASN282 GLN283 LYS284 SER285 TYR286 VAL287 ASP288 LEU289 ILE290 SER291 PRO292 ASP293 CYS294 GLN295 ALA296 PRO297 ARG298 ALA299 LEU300 LEU301 GLU302 PRO303 ALA304 LEU305 GLU306 THR307 PRO308 PRO309 GLN310 ALA311 LYS312 VAL313 PRO314 LYS315 PHE316 ILE317 ASP318 VAL319 LEU320 LEU321 LYS322 VAL323 SER324 GLY325 ILE326 SER327 PRO328 SER329 TYR330 ARG331 HIS332 SER333 VAL334 SER335 VAL336 PRO337 ALA338 GLY339 SER340 SER341 LEU342 GLU343 ASP344 ILE345 LEU346 LYS347 ASN348 ALA349 GLN350 GLU351 HIS352 GLY353 ARG354 PHE355 ARG356 PHE357 ARG358 THR359 GLN360 ALA361 SER362 LEU363 SER364 GLY365 PRO366 PHE367 LEU368 THR369 SER370 VAL371 LEU372 GLY373 ARG374 LYS375 ALA376 GLY377 GLU378 ARG379 GLU380 PHE381 TRP382 GLN383 VAL384 LEU385 ARG386 ASP387 PRO388 ASP389 THR390 PRO391 LEU392 GLN393 GLN394 GLY395 ILE396 ALA397 ASP398 TYR399 ARG400 PRO401 LYS402 ASP403 GLY404 GLU405 THR406 ILE407 GLU408 LEU409 ARG410 LEU411 VAL412 GLY413 TRP414
Unit 4 ASN1 ILE2 CYS3 GLU4 ILE5 THR6 GLU7 VAL8 ASP9 SER10 THR11 LEU12 VAL13 GLU14 ARG15 LEU16 GLY17 GLN18 ARG19 LEU20 LEU21 PRO22 TRP23 MET24 ASP25 ARG26 LEU27 SER28 GLN29 GLU30 GLN31 LEU32 ASN33 PRO34 SER35 ILE36 TYR37 VAL38 GLY39 LEU40 ARG41 LEU42 SER43 SER44 LEU45 GLN46 ALA47 GLY48 ALA49 LYS50 GLU51 ALA52 HIS53 TYR54 LEU55 HIS56 SER57 LEU58 LYS59 LEU60 SER61 TYR62 GLN63 GLN64 SER65 LEU66 LEU67 ARG68 PRO69 ALA70 SER71 ASN72 LYS73 ASP74 ASP75 ASN76 ASP77 SER78 GLU79 ALA80 LYS81 PRO82 SER83 MET84 GLY85 GLN86 LEU87 ALA88 LEU89 TYR90 LEU91 LEU92 ALA93 LEU94 ARG95 ALA96 ASN97 CYS98 GLU99 PHE100 ILE101 GLY102 GLY103 ARG104 LYS105 GLY106 ASP107 ARG108 LEU109 VAL110 SER111 GLN112 LEU113 LYS114 ARG115 PHE116 LEU117 GLU118 ASP119 GLU120 LYS121 ARG122 ALA123 ILE124 GLY125 HIS126 ASN127 HIS128 GLN129 GLY130 HIS131 PRO132 ARG133 THR134 SER135 TYR136 TYR137 GLN138 TYR139 SER140 LEU141 GLY142 ILE143 LEU144 ALA145 LEU146 CYS147 VAL148 HIS149 GLN150 LYS151 ARG152 VAL153 HIS154 ASP155 SER156 VAL157 VAL158 GLY159 LYS160 LEU161 LEU162 TYR163 ALA164 VAL165 GLU166 HIS167 LYS168 PRO169 HIS170 LEU171 LEU172 GLN173 ASP174 HIS175 VAL176 SER177 VAL178 ASP179 THR180 MET181 ALA182 MET183 ALA184 GLY185 MET186 ALA187 PHE188 SER189 CYS190 LEU191 GLU192 LEU193 SER194 ASN195 LEU196 ASN197 PRO198 LYS199 GLN200 ARG201 ASN202 ARG203 ILE204 ASN205 LEU206 ALA207 LEU208 LYS209 ARG210 VAL211 GLN212 GLU213 LYS214 ILE215 LEU216 LYS217 ALA218 GLN219 THR220 PRO221 GLU222 GLY223 TYR224 PHE225 GLY226 ASN227 VAL228 TYR229 SER230 THR231 PRO232 LEU233 ALA234 LEU235 GLN236 LEU237 LEU238 MET239 GLY240 SER241 LEU242 ARG243 PRO244 SER245 VAL246 GLU247 LEU248 GLY249 THR250 ALA251 CYS252 LEU253 LYS254 ALA255 LYS256 ALA257 ALA258 LEU259 GLN260 ALA261 SER262 LEU263 GLN264 HIS265 LYS266 THR267 PHE268 GLN269 ASN270 PRO271 LEU272 MET273 ILE274 SER275 GLN276 LEU277 LEU278 PRO279 VAL280 LEU281 ASN282 GLN283 LYS284 SER285 TYR286 VAL287 ASP288 LEU289 ILE290 SER291 PRO292 ASP293 CYS294 GLN295 ALA296 PRO297 ARG298 ALA299 LEU300 LEU301 GLU302 PRO303 ALA304 LEU305 GLU306 THR307 PRO308 PRO309 GLN310 ALA311 LYS312 VAL313 PRO314 LYS315 PHE316 ILE317 ASP318 VAL319 LEU320 LEU321 LYS322 VAL323 SER324 GLY325 ILE326 SER327 PRO328 SER329 TYR330 ARG331 HIS332 SER333 VAL334 SER335 VAL336 PRO337 ALA338 GLY339 SER340 SER341 LEU342 GLU343 ASP344 ILE345 LEU346 LYS347 ASN348 ALA349 GLN350 GLU351 HIS352 GLY353 ARG354 PHE355 ARG356 PHE357 ARG358 THR359 GLN360 ALA361 SER362 LEU363 SER364 GLY365 PRO366 PHE367 LEU368 THR369 SER370 VAL371 LEU372 GLY373 ARG374 LYS375 ALA376 GLY377 GLU378 ARG379 GLU380 PHE381 TRP382 GLN383 VAL384 LEU385 ARG386 ASP387 PRO388 ASP389 THR390 PRO391 LEU392 GLN393 GLN394 GLY395 ILE396 ALA397 ASP398 TYR399 ARG400 PRO401 LYS402 ASP403 GLY404 GLU405 THR406 ILE407 GLU408 LEU409 ARG410 LEU411 VAL412 GLY413 TRP414
Ligands
Unit 5 B120 CL901
Unit 6 B120 CL902
Unit 7 B120 CL904
Unit 8 B120 CL903
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany