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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BACILLUS SUBTILIS YXEP PROTEIN (APC1829 DINUCLEAR METAL BINDING PEPTIDASE FROM M20 FAMILY
Keywords M20 FAMILY PEPTIDASE, DINUCLEAR METAL BINDING, STRUCTURAL GE PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUC GENOMICS, MCSG, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1YSJ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN YXEP  A 359 2715 64
2  Protein   PROTEIN YXEP  B 356 2696 64
3  Ligand   PROTEIN YXEP  A 2 0 2
4  Ligand   PROTEIN YXEP  B 2 0 2
5 Water     312 0 312
total       1031 5411 444
Proteins
Unit 1 ALA2 ASP3 LYS4 ALA5 PHE6 HIS7 THR8 ARG9 LEU10 ILE11 ASN12 MSE13 ARG14 ARG15 ASP16 LEU17 HIS18 GLU19 HIS20 PRO21 GLU22 LEU23 SER24 PHE25 GLN26 GLU27 VAL28 GLU29 THR30 THR31 LYS32 LYS33 ILE34 ARG35 ARG36 TRP37 LEU38 GLU39 GLU40 GLU41 GLN42 ILE43 GLU44 ILE45 LEU46 ASP47 VAL48 PRO49 GLN50 LEU51 LYS52 THR53 GLY54 VAL55 ILE56 ALA57 GLU58 ILE59 LYS60 GLY61 ARG62 GLU63 ASP64 GLY65 PRO66 VAL67 ILE68 ALA69 ILE70 ARG71 ALA72 ASP73 ILE74 ASP75 ALA76 LEU77 PRO78 ILE79 GLN80 GLU81 GLN82 THR83 ASN84 LEU85 PRO86 PHE87 ALA88 SER89 LYS90 VAL91 ASP92 GLY93 THR94 MSE95 HIS96 ALA97 CYS98 GLY99 HIS100 ASP101 PHE102 HIS103 THR104 ALA105 SER106 ILE107 ILE108 GLY109 THR110 ALA111 MSE112 LEU113 LEU114 ASN115 GLN116 ARG117 ARG118 ALA119 GLU120 LEU121 LYS122 GLY123 THR124 VAL125 ARG126 PHE127 ILE128 PHE129 GLN130 PRO131 ALA132 GLU133 GLU134 ILE135 ALA136 ALA137 GLY138 ALA139 ARG140 LYS141 VAL142 LEU143 GLU144 ALA145 GLY146 VAL147 LEU148 ASN149 GLY150 VAL151 SER152 ALA153 ILE154 PHE155 GLY156 MSE157 HIS158 ASN159 LYS160 PRO161 ASP162 LEU163 PRO164 VAL165 GLY166 THR167 ILE168 GLY169 VAL170 LYS171 GLU172 GLY173 PRO174 LEU175 MSE176 ALA177 SER178 VAL179 ASP180 ARG181 PHE182 GLU183 ILE184 VAL185 ILE186 LYS187 GLY188 LYS189 ASN198 SER199 ILE200 ASP201 PRO202 ILE203 ALA204 ALA205 ALA206 GLY207 GLN208 ILE209 ILE210 SER211 GLY212 LEU213 GLN214 ASN226 ALA227 VAL228 VAL229 SER230 ILE231 THR232 ARG233 VAL234 GLN235 ALA236 GLY237 THR238 SER239 TRP240 ASN241 VAL242 ILE243 PRO244 ASP245 GLN246 ALA247 GLU248 MSE249 GLU250 GLY251 THR252 VAL253 ARG254 THR255 PHE256 GLN257 LYS258 GLU259 ALA260 ARG261 GLN262 ALA263 VAL264 PRO265 GLU266 HIS267 MSE268 ARG269 ARG270 VAL271 ALA272 GLU273 GLY274 ILE275 ALA276 ALA277 GLY278 TYR279 GLY280 ALA281 GLN282 ALA283 GLU284 PHE285 LYS286 TRP287 PHE288 PRO289 TYR290 LEU291 PRO292 SER293 VAL294 GLN295 ASN296 ASP297 GLY298 THR299 PHE300 LEU301 ASN302 ALA303 ALA304 SER305 GLU306 ALA307 ALA308 ALA309 ARG310 LEU311 GLY312 TYR313 GLN314 THR315 VAL316 HIS317 ALA318 GLU319 GLN320 SER321 PRO322 GLY323 GLY324 GLU325 ASP326 PHE327 ALA328 LEU329 TYR330 GLN331 GLU332 LYS333 ILE334 PRO335 GLY336 PHE337 PHE338 VAL339 TRP340 MSE341 GLY342 THR343 ASN344 GLY345 THR346 GLU347 GLU348 TRP349 HIS350 HIS351 PRO352 ALA353 PHE354 THR355 LEU356 ASP357 GLU358 GLU359 ALA360 LEU361 THR362 VAL363 ALA364 SER365 GLN366 TYR367 PHE368 ALA369 GLU370 LEU371 ALA372 VAL373 ILE374 VAL375 LEU376 GLU377 THR378 ILE379
Unit 2 ASP3 LYS4 ALA5 PHE6 HIS7 THR8 ARG9 LEU10 ILE11 ASN12 MSE13 ARG14 ARG15 ASP16 LEU17 HIS18 GLU19 HIS20 PRO21 GLU22 LEU23 SER24 PHE25 GLN26 GLU27 VAL28 GLU29 THR30 THR31 LYS32 LYS33 ILE34 ARG35 ARG36 TRP37 LEU38 GLU39 GLU40 GLU41 GLN42 ILE43 GLU44 ILE45 LEU46 ASP47 VAL48 PRO49 GLN50 LEU51 LYS52 THR53 GLY54 VAL55 ILE56 ALA57 GLU58 ILE59 LYS60 GLY61 ARG62 GLU63 ASP64 GLY65 PRO66 VAL67 ILE68 ALA69 ILE70 ARG71 ALA72 ASP73 ILE74 ASP75 ALA76 LEU77 PRO78 ILE79 GLN80 GLU81 GLN82 THR83 ASN84 LEU85 PRO86 PHE87 ALA88 SER89 LYS90 VAL91 ASP92 GLY93 THR94 MSE95 HIS96 ALA97 CYS98 GLY99 HIS100 ASP101 PHE102 HIS103 THR104 ALA105 SER106 ILE107 ILE108 GLY109 THR110 ALA111 MSE112 LEU113 LEU114 ASN115 GLN116 ARG117 ARG118 ALA119 GLU120 LEU121 LYS122 GLY123 THR124 VAL125 ARG126 PHE127 ILE128 PHE129 GLN130 PRO131 ALA132 GLU133 GLU134 ILE135 ALA136 ALA137 GLY138 ALA139 ARG140 LYS141 VAL142 LEU143 GLU144 ALA145 GLY146 VAL147 LEU148 ASN149 GLY150 VAL151 SER152 ALA153 ILE154 PHE155 GLY156 MSE157 HIS158 ASN159 LYS160 PRO161 ASP162 LEU163 PRO164 VAL165 GLY166 THR167 ILE168 GLY169 VAL170 LYS171 GLU172 GLY173 PRO174 LEU175 MSE176 ALA177 SER178 VAL179 ASP180 ARG181 PHE182 GLU183 ILE184 VAL185 ILE186 LYS187 GLY188 LYS189 ILE200 ASP201 PRO202 ILE203 ALA204 ALA205 ALA206 GLY207 GLN208 ILE209 ILE210 SER211 GLY212 LEU213 GLN214 ASN226 ALA227 VAL228 VAL229 SER230 ILE231 THR232 ARG233 VAL234 GLN235 ALA236 GLY237 THR238 SER239 TRP240 ASN241 VAL242 ILE243 PRO244 ASP245 GLN246 ALA247 GLU248 MSE249 GLU250 GLY251 THR252 VAL253 ARG254 THR255 PHE256 GLN257 LYS258 GLU259 ALA260 ARG261 GLN262 ALA263 VAL264 PRO265 GLU266 HIS267 MSE268 ARG269 ARG270 VAL271 ALA272 GLU273 GLY274 ILE275 ALA276 ALA277 GLY278 TYR279 GLY280 ALA281 GLN282 ALA283 GLU284 PHE285 LYS286 TRP287 PHE288 PRO289 TYR290 LEU291 PRO292 SER293 VAL294 GLN295 ASN296 ASP297 GLY298 THR299 PHE300 LEU301 ASN302 ALA303 ALA304 SER305 GLU306 ALA307 ALA308 ALA309 ARG310 LEU311 GLY312 TYR313 GLN314 THR315 VAL316 HIS317 ALA318 GLU319 GLN320 SER321 PRO322 GLY323 GLY324 GLU325 ASP326 PHE327 ALA328 LEU329 TYR330 GLN331 GLU332 LYS333 ILE334 PRO335 GLY336 PHE337 PHE338 VAL339 TRP340 MSE341 GLY342 THR343 ASN344 GLY345 THR346 GLU347 GLU348 TRP349 HIS350 HIS351 PRO352 ALA353 PHE354 THR355 LEU356 ASP357 GLU358 GLU359 ALA360 LEU361 THR362 VAL363 ALA364 SER365 GLN366 TYR367 PHE368 ALA369 GLU370 LEU371 ALA372 VAL373 ILE374 VAL375 LEU376 GLU377 THR378 ILE379
Ligands
Unit 3 NI381 NI382
Unit 4 NI381 NI382
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany