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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TRP REPRESSOR BINDING PROTEIN WRBA IN C WITH FMN
Keywords ALPHA-BETA TWISTED OPEN SHEET, STRUCTURAL GENOMICS, PSI, PRO STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRU GENOMICS, NYSGXRC, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1YRH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  A 200 1447 48
2  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  B 200 1447 48
3  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  C 201 1452 48
4  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  D 201 1452 48
5  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  E 198 1437 48
6  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  F 202 1459 48
7  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  G 200 1447 48
8  Protein   TRP REPRESSOR BINDING PROTEIN WRBA  H 201 1452 48
9  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  A 1 0 31
10  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  B 1 0 31
11  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  C 1 0 31
12  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  D 1 0 31
13  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  E 1 0 31
14  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  F 1 0 31
15  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  G 1 0 31
16  Ligand   TRP REPRESSOR BINDING PROTEIN WRBA  H 1 0 31
17 Water     161 0 161
total       1772 11593 793

Proteins
Unit 1 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 2 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 3 ALA3 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 4 ALA3 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 5 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201
Unit 6 THR2 ALA3 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 7 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203
Unit 8 ALA3 PRO4 VAL5 LYS6 LEU7 ALA8 ILE9 VAL10 PHE11 TYR12 SER13 SER14 THR15 GLY16 THR17 GLY18 TYR19 ALA20 MSE21 ALA22 GLN23 GLU24 ALA25 ALA26 GLU27 ALA28 GLY29 ARG30 ALA31 ALA32 GLY33 ALA34 GLU35 VAL36 ARG37 LEU38 LEU39 LYS40 VAL41 ARG42 GLU43 THR44 ALA45 PRO46 GLN47 ASP48 VAL49 ILE50 ASP51 GLY52 GLN53 ASP54 ALA55 TRP56 LYS57 ALA58 ASN59 ILE60 GLU61 ALA62 MSE63 LYS64 ASP65 VAL66 PRO67 GLU68 ALA69 THR70 PRO71 ALA72 ASP73 LEU74 GLU75 TRP76 ALA77 GLU78 ALA79 ILE80 VAL81 PHE82 SER83 SER84 PRO85 THR86 ARG87 PHE88 GLY89 GLY90 ALA91 THR92 SER93 GLN94 MSE95 ARG96 ALA97 PHE98 ILE99 ASP100 THR101 LEU102 GLY103 GLY104 LEU105 TRP106 SER107 SER108 GLY109 LYS110 LEU111 ALA112 ASN113 LYS114 THR115 PHE116 SER117 ALA118 MSE119 THR120 SER121 ALA122 GLN123 ASN124 VAL125 ASN126 GLY127 GLY128 GLN129 GLU130 THR131 THR132 LEU133 GLN134 THR135 LEU136 TYR137 MSE138 THR139 ALA140 MSE141 HIS142 TRP143 GLY144 ALA145 VAL146 LEU147 THR148 PRO149 PRO150 GLY151 TYR152 THR153 ASP154 GLU155 VAL156 ILE157 PHE158 LYS159 SER160 GLY161 GLY162 ASN163 PRO164 TYR165 GLY166 ALA167 SER168 VAL169 THR170 ALA171 ASN172 GLY173 GLN174 PRO175 LEU176 LEU177 GLU178 ASN179 ASP180 ARG181 ALA182 SER183 ILE184 ARG185 HIS186 GLN187 VAL188 ARG189 ARG190 GLN191 VAL192 GLU193 LEU194 THR195 ALA196 LYS197 LEU198 LEU199 GLU200 GLY201 GLY202 SER203

Ligands
Unit 9 FMN404
Unit 10 FMN403
Unit 11 FMN402
Unit 12 FMN401
Unit 13 FMN408
Unit 14 FMN407
Unit 15 FMN406
Unit 16 FMN405

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany