1YM0 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF EARTHWORM FIBRINOLYTIC ENZYME COMPONENT NOVEL, GLYCOSYLATED TWO-CHAINED TRYPSIN
• Keywords: TWO CHAINS, GLYCOSYLATION, PYROGLUTAMATION, EIGHT-MEMBERED R PEPTIDE BOND, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YM0	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FIBRINOTIC ENZYME COMPONENT B	A	238	1774	0
2	Protein	FIBRINOTIC ENZYME COMPONENT B	B	27	190	8
3	Ligand		C	6	0	70
4	Ligand	FIBRINOTIC ENZYME COMPONENT B	A	5	0	13
5	Water			252	0	252
total				528	1964	343

Proteins

Unit 1

ILE 16 VAL 17 GLY 18 GLY 19 ILE 20 GLU 21 ALA 22 ARG 23 PRO 24 TYR 25 GLU 26 PHE 27 PRO 28 TRP 29 GLN 30 VAL 31 SER 32 VAL 33 ARG 34 ARG 35 LYS 36 SER 37 SER 37A ASP 38 SER 39 HIS 40 PHE 41 CYS 42 GLY 43 GLY 44 SER 45 ILE 46 ILE 47 ASN 48 ASP 49 ARG 50 TRP 51 VAL 52 VAL 53 CYS 54 ALA 55 ALA 56 HIS 57 CYS 58 MET 59 GLN 60 GLY 60A GLU 60B ALA 60C PRO 61 ALA 62 LEU 63 VAL 64 SER 65 LEU 66 VAL 67 VAL 68 GLY 69 GLU 70 HIS 71 ASP 72 SER 73 SER 74 ALA 75 ALA 76 SER 77 THR 78 VAL 79 ARG 80 GLN 81 THR 82 HIS 83 ASP 84 VAL 85 ASP 86 SER 87 ILE 88 PHE 89 VAL 90 ASN 91 GLU 92 ASN 93 TYR 94 ASP 95 PRO 96 ALA 97 THR 98 LEU 99 GLU 100 ASN 101 ASP 102 VAL 103 SER 104 VAL 105 ILE 106 LYS 107 THR 108 ALA 109 VAL 110 ALA 111 ILE 112 THR 113 PHE 114 ASP 115 ILE 116 ASN 117 VAL 118 GLY 119 PRO 120 ILE 121 CYS 122 ALA 123 PRO 124 ASP 125 PRO 126 ALA 127 ASN 128 ASP 129 TYR 130 VAL 131 TYR 133 ARG 134 LYS 135 SER 136 GLN 137 CYS 138 SER 139 GLY 140 TRP 141 GLY 142 THR 143 ILE 144 ASN 145 SER 146 GLY 147 GLY 148 VAL 149 CYS 150 CYS 151 PRO 152 ALA 153 VAL 154 LEU 155 ARG 156 TYR 157 VAL 158 THR 159 LEU 160 ASN 161 ILE 162 THR 163 THR 164 ASN 165 ALA 166 PHE 167 CYS 168 ASP 169 ALA 170 VAL 171 TYR 172 THR 173 SER 174 ASP 174A THR 175 ILE 176 TYR 177 ASP 178 ASP 179 MET 180 ILE 181 CYS 182 ALA 183 THR 184 ASP 185 ASN 186 THR 186A GLY 186B MET 186C THR 186D ASP 187 ARG 188 ASP 189 SER 190 CYS 191 GLN 192 GLY 193 ASP 194 SER 195 GLY 196 GLY 197 PRO 198 LEU 199 SER 200 VAL 201 LYS 202 ASP 203 GLY 204 SER 204A GLY 205 ILE 206 PHE 207 SER 208 LEU 209 VAL 210 GLY 211 ILE 212 VAL 213 SER 214 TRP 215 GLY 216 ILE 217 GLY 219 CYS 220 ALA 221 SER 222 GLY 223 TYR 224 PRO 225 GLY 226 VAL 227 TYR 228 SER 229 ARG 230 VAL 231 GLY 232 PHE 233 HIS 234 ALA 235 GLY 236 TRP 237 ILE 238 THR 239 ASP 240 THR 241 ILE 242 THR 243 ASN 244 ASN 245

Unit 2

CYS 1 GLN 1A GLY 1B GLY 1C PRO 1D TYR 1E TRP 1F VAL 1G PRO 1H PRO 1I PCA 1J GLY 2 VAL 3 SER 4 GLN 5 TYR 6 SER 7 ASP 8 ALA 9 GLY 10 ASP 11 MET 12 GLU 13 LEU 13A PRO 13B PRO 13C GLY 13D

Ligands

Unit 3	NAG 1 NAG 2 MAN 3 MAN 4 FUC 5 FUC 6
Unit 4	MG 401 MG 402 MG 403 SO4 501 SO4 502