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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A YBJQ-LIKE PROTEIN OF UNKNOWN FUNCTION FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTION
Keywords YBJQ-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCT GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, UNKNOWN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VPH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL PROTEIN SSO2532  A 138 1095 0
2  Protein   HYPOTHETICAL PROTEIN SSO2532  B 137 1083 0
3  Protein   HYPOTHETICAL PROTEIN SSO2532  C 144 1144 0
4  Protein   HYPOTHETICAL PROTEIN SSO2532  D 138 1101 0
5  Protein   HYPOTHETICAL PROTEIN SSO2532  E 138 1095 0
6  Protein   HYPOTHETICAL PROTEIN SSO2532  F 143 1140 0
7  Ligand   HYPOTHETICAL PROTEIN SSO2532  A 3 0 11
8  Ligand   HYPOTHETICAL PROTEIN SSO2532  B 1 0 5
9  Ligand   HYPOTHETICAL PROTEIN SSO2532  C 4 0 12
10  Ligand   HYPOTHETICAL PROTEIN SSO2532  D 5 0 20
11  Ligand   HYPOTHETICAL PROTEIN SSO2532  E 1 0 5
12  Ligand   HYPOTHETICAL PROTEIN SSO2532  F 3 0 11
13 Water     286 0 286
total       1141 6658 350

Proteins
Unit 1 HIS0 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137
Unit 2 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137
Unit 3 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137
Unit 4 HIS0 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137
Unit 5 HIS0 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137
Unit 6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 MET1 LYS2 VAL3 TYR4 PHE5 ASP6 ASP7 ILE8 TYR9 VAL10 SER11 THR12 ALA13 ARG14 GLN15 PHE16 GLU17 LEU18 VAL19 ASP20 ILE21 THR22 ASP23 GLN24 VAL25 GLU26 GLN27 ILE28 VAL29 GLU30 LYS31 SER32 GLY33 ILE34 LYS35 ASN36 GLY37 ILE38 CYS39 LEU40 ILE41 PHE42 VAL43 ALA44 HIS45 SER46 THR47 ALA48 ALA49 ILE50 VAL51 ALA52 ASN53 GLU54 HIS55 GLU56 ARG57 GLY58 LEU59 MET60 GLU61 ASP62 ILE63 LEU64 THR65 LYS66 ILE67 LYS68 GLU69 PHE70 THR71 GLU72 PRO73 SER74 ARG75 SER76 TRP77 LYS78 HIS79 ASN80 LEU81 ILE82 ASP83 ASP84 ASN85 ALA86 HIS87 ALA88 HIS89 LEU90 GLY91 ALA92 THR93 PHE94 LEU95 GLY96 ALA97 GLU98 ARG99 VAL100 PHE101 PRO102 VAL103 ARG104 GLU105 GLY106 LYS107 LEU108 VAL109 ARG110 GLY111 THR112 TRP113 GLN114 ASN115 ILE116 PHE117 LEU118 VAL119 GLU120 LEU121 ASP122 GLY123 PRO124 ARG125 SER126 GLU127 ARG128 HIS129 ILE130 THR131 VAL132 GLU133 ILE134 LEU135 GLY136 GLU137

Ligands
Unit 7 K138 PO4139 PO4140
Unit 8 PO4138
Unit 9 K138 PO4139 PO4140 CL141
Unit 10 K138 PO4139 PO4140 PO4141 EDO142
Unit 11 PO4138
Unit 12 K138 PO4139 PO4140

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany