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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN INDIGOIDINE SYNTHASE A (IDGA)-LIKE P (TM1464) FROM THERMOTOGA MARITIMA MSB8 AT 1.90 A RESOLUTION
Keywords INDIGOIDINE SYNTHASE A-LIKE FOLD, STRUCTURAL GENOMICS, JOINT FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE BIOSYNTHETIC PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1VKM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  A 292 2208 80
2  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  B 292 2182 80
3  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  C 292 2204 80
4  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  D 292 2196 80
5  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  E 292 2167 80
6  Protein   CONSERVED HYPOTHETICAL PROTEIN TM1464  F 292 2186 80
7  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  A 5 0 20
8  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  B 6 0 27
9  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  C 6 0 24
10  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  D 5 0 23
11  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  E 7 0 28
12  Ligand   CONSERVED HYPOTHETICAL PROTEIN TM1464  F 4 0 16
13 Water     984 0 984
total       2769 13143 1602
Proteins
Unit 1 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Unit 2 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Unit 3 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Unit 4 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Unit 5 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Unit 6 LYS-7 ILE-6 HIS-5 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 VAL1 ILE2 ILE3 GLU4 SER5 ARG6 ILE7 GLU8 LYS9 GLY10 LYS11 PRO12 VAL13 VAL14 GLY15 MSE16 GLU17 THR18 THR19 VAL20 PHE21 VAL22 HIS23 GLY24 LEU25 PRO26 ARG27 LYS28 GLU29 ALA30 ILE31 GLU32 LEU33 PHE34 ARG35 ARG36 ALA37 LYS38 GLU39 ILE40 SER41 ARG42 GLU43 LYS44 GLY45 PHE46 GLN47 LEU48 ALA49 VAL50 ILE51 GLY52 ILE53 LEU54 LYS55 GLY56 LYS57 ILE58 VAL59 ALA60 GLY61 MSE62 SER63 GLU64 GLU65 GLU66 LEU67 GLU68 ALA69 MSE70 MSE71 ARG72 GLU73 GLY74 ALA75 ASP76 LYS77 VAL78 GLY79 THR80 ARG81 GLU82 ILE83 PRO84 ILE85 VAL86 VAL87 ALA88 GLU89 GLY90 LYS91 ASN92 ALA93 ALA94 THR95 THR96 VAL97 SER98 ALA99 THR100 ILE101 PHE102 LEU103 SER104 ARG105 ARG106 ILE107 GLY108 ILE109 GLU110 VAL111 VAL112 VAL113 THR114 GLY115 GLY116 THR117 GLY118 GLY119 VAL120 HIS121 PRO122 GLY123 ARG124 VAL125 ASP126 VAL127 SER128 GLN129 ASP130 LEU131 THR132 GLU133 MSE134 SER135 SER136 SER137 ARG138 ALA139 VAL140 LEU141 VAL142 SER143 SER144 GLY145 ILE146 LYS147 SER148 ILE149 LEU150 ASP151 VAL152 GLU153 ALA154 THR155 PHE156 GLU157 MSE158 LEU159 GLU160 THR161 LEU162 GLU163 ILE164 PRO165 LEU166 VAL167 GLY168 PHE169 ARG170 THR171 ASN172 GLU173 PHE174 PRO175 LEU176 PHE177 PHE178 SER179 ARG180 LYS181 SER182 GLY183 ARG184 ARG185 VAL186 PRO187 ARG188 ILE189 GLU190 ASN191 VAL192 GLU193 GLU194 VAL195 LEU196 LYS197 ILE198 TYR199 GLU200 SER201 MSE202 LYS203 GLU204 MSE205 GLU206 LEU207 GLU208 LYS209 THR210 LEU211 MSE212 VAL213 LEU214 ASN215 PRO216 VAL217 PRO218 GLU219 GLU220 TYR221 GLU222 ILE223 PRO224 HIS225 ASP226 GLU227 ILE228 GLU229 ARG230 LEU231 LEU232 GLU233 LYS234 ILE235 GLU236 LEU237 GLU238 VAL239 GLU240 GLY241 LYS242 GLU243 VAL244 THR245 PRO246 PHE247 LEU248 LEU249 LYS250 LYS251 LEU252 VAL253 GLU254 MSE255 THR256 ASN257 GLY258 ARG259 THR260 LEU261 LYS262 ALA263 ASN264 LEU265 ALA266 LEU267 LEU268 GLU269 GLU270 ASN271 VAL272 LYS273 LEU274 ALA275 GLY276 GLU277 ILE278 ALA279 VAL280 LYS281 LEU282 LYS283 ARG284
Ligands
Unit 7 MN300 MN400 MN401 UNL600 EDO601
Unit 8 MN300 MN400 UNL600 EDO601 EDO602 EDO603
Unit 9 MN300 MN400 MN401 UNL600 EDO601 EDO602
Unit 10 MN300 MN400 UNL600 EDO601 EDO602
Unit 11 MN300 MN400 MN401 UNL600 EDO601 EDO602 EDO603
Unit 12 MN300 MN400 MN401 UNL600
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany