Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PURINE PHOSPHORIBOSYLTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3
Keywords PURINE PHOSPHORIBOSYLTRANSFERASE, PYROCOCCUS HORIKOSHII, STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VDM     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  A 151 1227 0
2  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  B 149 1207 0
3  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  C 143 1159 0
4  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  D 147 1193 0
5  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  E 149 1211 0
6  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  F 150 1213 0
7  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  G 152 1233 0
8  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  H 149 1214 0
9  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  I 146 1184 0
10  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  J 147 1195 0
11  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  K 146 1189 0
12  Protein   PURINE PHOSPHORIBOSYLTRANSFERASE  L 149 1207 0
13 Water     749 0 749
total       2527 14432 749

Proteins
Unit 1 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 GLU66 ARG67 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152 GLU153
Unit 2 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152 GLU153
Unit 3 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 4 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 5 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 ILE64 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152 GLU153
Unit 6 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 ILE64 ASP65 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 7 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 ILE64 ASP65 GLU66 ARG67 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 8 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 ARG67 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152 GLU153
Unit 9 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 10 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 ARG67 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 11 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152
Unit 12 MET1 ASP2 LYS3 VAL4 TYR5 LEU6 THR7 TRP8 TRP9 GLN10 VAL11 ASP12 ARG13 ALA14 ILE15 PHE16 ALA17 LEU18 ALA19 GLU20 LYS21 LEU22 ARG23 GLU24 TYR25 LYS26 PRO27 ASP28 VAL29 ILE30 ILE31 GLY32 VAL33 ALA34 ARG35 GLY36 GLY37 LEU38 ILE39 PRO40 ALA41 VAL42 ARG43 LEU44 SER45 HIS46 ILE47 LEU48 GLY49 ASP50 ILE51 PRO52 LEU53 LYS54 VAL55 ILE56 ASP57 VAL58 LYS59 PHE60 TYR61 LYS62 GLY63 GLY68 GLU69 LYS70 PRO71 VAL72 ILE73 THR74 ILE75 PRO76 ILE77 HIS78 GLY79 ASP80 LEU81 LYS82 ASP83 LYS84 ARG85 VAL86 VAL87 ILE88 VAL89 ASP90 ASP91 VAL92 SER93 ASP94 THR95 GLY96 LYS97 THR98 LEU99 GLU100 VAL101 VAL102 ILE103 GLU104 GLU105 VAL106 LYS107 LYS108 LEU109 GLY110 ALA111 LYS112 GLU113 ILE114 LYS115 ILE116 ALA117 CYS118 LEU119 ALA120 MET121 LYS122 PRO123 TRP124 THR125 SER126 VAL127 VAL128 PRO129 ASP130 TYR131 TYR132 VAL133 PHE134 ARG135 THR136 GLU137 LYS138 TRP139 ILE140 VAL141 PHE142 PRO143 TRP144 GLU145 GLU146 PHE147 PRO148 VAL149 ILE150 GLU151 LYS152 GLU153

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany