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Sequence, Chains, Asymmetric and Biological Units

Title NEWCASTLE DISEASE VIRUS HEMAGGLUTININ-NEURAMINIDASE: EVIDENC SECOND SIALIC ACID BINDING SITE AND IMPLICATIONS FOR FUSION
Keywords HYDROLASE, SIALIDASE, NEURAMINIDASE, HEMAGGLUTININ-NEURAMINI HEMAGGLUTININ, GLYCOPROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1USR     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN  A 448 3450 0
2  Protein   HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN  B 447 3446 0
3  Ligand    C 2 0 33
4  Ligand   HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN  A 3 0 36
5  Ligand   HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN  B 4 0 57
6 Water     921 0 921
total       1825 6896 1047
Proteins
Unit 1 GLY124 ALA125 PRO126 ILE127 HIS128 ASP129 PRO130 ASP131 PHE132 ILE133 GLY134 GLY135 ILE136 GLY137 LYS138 GLU139 LEU140 ILE141 VAL142 ASP143 ASN144 ALA145 SER146 ASP147 VAL148 THR149 SER150 PHE151 TYR152 PRO153 SER154 ALA155 PHE156 GLN157 GLU158 HIS159 LEU160 ASN161 PHE162 ILE163 PRO164 ALA165 PRO166 THR167 THR168 GLY169 SER170 GLY171 CYS172 THR173 ARG174 ILE175 PRO176 SER177 PHE178 ASP179 MET180 SER181 ALA182 THR183 HIS184 TYR185 CYS186 TYR187 THR188 HIS189 ASN190 VAL191 ILE192 LEU193 SER194 GLY195 CYS196 ARG197 ASP198 HIS199 SER200 HIS201 SER202 HIS203 GLN204 TYR205 LEU206 ALA207 LEU208 GLY209 VAL210 LEU211 ARG212 THR213 THR214 ALA215 THR216 GLY217 ARG218 ILE219 PHE220 PHE221 SER222 THR223 LEU224 ARG225 SER226 ILE227 SER228 LEU229 ASP230 ASP231 THR232 GLN233 ASN234 ARG235 LYS236 SER237 CYS238 SER239 VAL240 SER241 ALA242 THR243 PRO244 LEU245 GLY246 CYS247 ASP248 MET249 LEU250 CYS251 SER252 LYS253 VAL254 THR255 GLU256 THR257 GLU258 GLU259 GLU260 ASP261 TYR262 ASN263 SER264 ALA265 VAL266 PRO267 THR268 LEU269 MET270 ALA271 HIS272 GLY273 ARG274 LEU275 GLY276 PHE277 ASP278 GLY279 GLN280 TYR281 HIS282 GLU283 LYS284 ASP285 LEU286 ASP287 VAL288 THR289 THR290 LEU291 PHE292 GLU293 ASP294 TRP295 VAL296 ALA297 ASN298 TYR299 PRO300 GLY301 VAL302 GLY303 GLY304 GLY305 SER306 PHE307 ILE308 ASP309 GLY310 ARG311 VAL312 TRP313 PHE314 SER315 VAL316 TYR317 GLY318 GLY319 LEU320 LYS321 PRO322 ASN323 SER324 PRO325 SER326 ASP327 THR328 VAL329 GLN330 GLU331 GLY332 LYS333 TYR334 VAL335 ILE336 TYR337 LYS338 ARG339 TYR340 ASN341 ASP342 THR343 CYS344 PRO345 ASP346 GLU347 GLN348 ASP349 TYR350 GLN351 ILE352 ARG353 MET354 ALA355 LYS356 SER357 SER358 TYR359 LYS360 PRO361 GLY362 ARG363 PHE364 GLY365 GLY366 LYS367 ARG368 ILE369 GLN370 GLN371 ALA372 ILE373 LEU374 SER375 ILE376 LYS377 VAL378 SER379 THR380 SER381 LEU382 GLY383 GLU384 ASP385 PRO386 VAL387 LEU388 THR389 VAL390 PRO391 PRO392 ASN393 THR394 VAL395 THR396 LEU397 MET398 GLY399 ALA400 GLU401 GLY402 ARG403 ILE404 LEU405 THR406 VAL407 GLY408 THR409 SER410 HIS411 PHE412 LEU413 TYR414 GLN415 ARG416 GLY417 SER418 SER419 TYR420 PHE421 SER422 PRO423 ALA424 LEU425 LEU426 TYR427 PRO428 MET429 THR430 VAL431 SER432 ASN433 LYS434 THR435 ALA436 THR437 LEU438 HIS439 SER440 PRO441 TYR442 THR443 PHE444 ASN445 ALA446 PHE447 THR448 ARG449 PRO450 GLY451 SER452 ILE453 PRO454 CYS455 GLN456 ALA457 SER458 ALA459 ARG460 CYS461 PRO462 ASN463 SER464 CYS465 VAL466 THR467 GLY468 VAL469 TYR470 THR471 ASP472 PRO473 TYR474 PRO475 LEU476 ILE477 PHE478 TYR479 ARG480 ASN481 HIS482 THR483 LEU484 ARG485 GLY486 VAL487 PHE488 GLY489 THR490 MET491 LEU492 ASP493 SER494 GLU495 GLN496 ALA497 ARG498 LEU499 ASN500 PRO501 ALA502 SER503 ALA504 VAL505 PHE506 ASP507 SER508 THR509 SER510 ARG511 SER512 ARG513 ILE514 THR515 ARG516 VAL517 SER518 SER519 SER520 SER521 THR522 LYS523 ALA524 ALA525 TYR526 THR527 THR528 SER529 THR530 CYS531 PHE532 LYS533 VAL534 VAL535 LYS536 THR537 ASN538 LYS539 THR540 TYR541 CYS542 LEU543 SER544 ILE545 ALA546 GLU547 ILE548 SER549 ASN550 THR551 LEU552 PHE553 GLY554 GLU555 PHE556 ARG557 ILE558 VAL559 PRO560 LEU561 LEU562 VAL563 GLU564 ILE565 LEU566 LYS567 ASN568 ASP569 GLY570 VAL571
Unit 2 GLY124 ALA125 PRO126 ILE127 HIS128 ASP129 PRO130 ASP131 PHE132 ILE133 GLY134 GLY135 ILE136 GLY137 LYS138 GLU139 LEU140 ILE141 VAL142 ASP143 ASN144 ALA145 SER146 ASP147 VAL148 THR149 SER150 PHE151 TYR152 PRO153 SER154 ALA155 PHE156 GLN157 GLU158 HIS159 LEU160 ASN161 PHE162 ILE163 PRO164 ALA165 PRO166 THR167 THR168 GLY169 SER170 GLY171 CYS172 THR173 ARG174 ILE175 PRO176 SER177 PHE178 ASP179 MET180 SER181 ALA182 THR183 HIS184 TYR185 CYS186 TYR187 THR188 HIS189 ASN190 VAL191 ILE192 LEU193 SER194 GLY195 CYS196 ARG197 ASP198 HIS199 SER200 HIS201 SER202 HIS203 GLN204 TYR205 LEU206 ALA207 LEU208 GLY209 VAL210 LEU211 ARG212 THR213 THR214 ALA215 THR216 GLY217 ARG218 ILE219 PHE220 PHE221 SER222 THR223 LEU224 ARG225 SER226 ILE227 SER228 LEU229 ASP230 ASP231 THR232 GLN233 ASN234 ARG235 LYS236 SER237 CYS238 SER239 VAL240 SER241 ALA242 THR243 PRO244 LEU245 GLY246 CYS247 ASP248 MET249 LEU250 CYS251 SER252 LYS253 VAL254 THR255 GLU256 THR257 GLU258 GLU259 GLU260 ASP261 TYR262 ASN263 SER264 ALA265 VAL266 PRO267 THR268 LEU269 MET270 ALA271 HIS272 GLY273 ARG274 LEU275 GLY276 PHE277 ASP278 GLY279 GLN280 TYR281 HIS282 GLU283 LYS284 ASP285 LEU286 ASP287 VAL288 THR289 THR290 LEU291 PHE292 GLU293 ASP294 TRP295 VAL296 ALA297 ASN298 TYR299 PRO300 GLY301 VAL302 GLY303 GLY304 GLY305 SER306 PHE307 ILE308 ASP309 GLY310 ARG311 VAL312 TRP313 PHE314 SER315 VAL316 TYR317 GLY318 GLY319 LEU320 LYS321 PRO322 ASN323 SER324 PRO325 SER326 ASP327 THR328 VAL329 GLN330 GLU331 GLY332 LYS333 TYR334 VAL335 ILE336 TYR337 LYS338 ARG339 TYR340 ASN341 ASP342 THR343 CYS344 PRO345 ASP346 GLU347 GLN348 ASP349 TYR350 GLN351 ILE352 ARG353 MET354 ALA355 LYS356 SER357 SER358 TYR359 LYS360 PRO361 GLY362 ARG363 PHE364 GLY365 GLY366 LYS367 ARG368 ILE369 GLN370 GLN371 ALA372 ILE373 LEU374 SER375 ILE376 LYS377 VAL378 SER379 THR380 SER381 LEU382 GLY383 GLU384 ASP385 PRO386 VAL387 LEU388 THR389 VAL390 PRO391 PRO392 ASN393 THR394 VAL395 THR396 LEU397 MET398 GLY399 ALA400 GLU401 GLY402 ARG403 ILE404 LEU405 THR406 VAL407 GLY408 THR409 SER410 HIS411 PHE412 LEU413 TYR414 GLN415 ARG416 GLY417 SER418 SER419 TYR420 PHE421 SER422 PRO423 ALA424 LEU425 LEU426 TYR427 PRO428 MET429 THR430 VAL431 SER432 ASN433 LYS434 THR435 ALA436 THR437 LEU438 HIS439 SER440 PRO441 TYR442 THR443 PHE444 ASN445 ALA446 PHE447 THR448 ARG449 PRO450 GLY451 SER452 ILE453 PRO454 CYS455 GLN456 ALA457 SER458 ALA459 ARG460 CYS461 PRO462 ASN463 SER464 CYS465 VAL466 THR467 GLY468 VAL469 TYR470 THR471 ASP472 PRO473 TYR474 PRO475 LEU476 ILE477 PHE478 TYR479 ARG480 ASN481 HIS482 THR483 LEU484 ARG485 GLY486 VAL487 PHE488 GLY489 THR490 MET491 LEU492 ASP493 SER494 GLU495 GLN496 ALA497 ARG498 LEU499 ASN500 PRO501 ALA502 SER503 ALA504 VAL505 PHE506 ASP507 SER508 THR509 SER510 ARG511 SER512 ARG513 ILE514 THR515 ARG516 VAL517 SER518 SER519 SER520 SER521 THR522 LYS523 ALA524 ALA525 TYR526 THR527 THR528 SER529 THR530 CYS531 PHE532 LYS533 VAL534 VAL535 LYS536 THR537 ASN538 LYS539 THR540 TYR541 CYS542 LEU543 SER544 ILE545 ALA546 GLU547 ILE548 SER549 ASN550 THR551 LEU552 PHE553 GLY554 GLU555 PHE556 ARG557 ILE558 VAL559 PRO560 LEU561 LEU562 VAL563 GLU564 ILE565 LEU566 LYS567 ASN568 ASP569 GLY570
Ligands
Unit 3 WIA1 SIA2
Unit 4 DAN1572 NDG1573 CA1574
Unit 5 DAN1570 NDG1571 SIA1572 CA1573
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany