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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF A COMPLEX OF THE GOLGIN-245 GRIP DOMAIN WITH AR
Keywords HYDROLASE/PROTEIN-BINDING, COMPLEX (GTPASE-GOLGIN), GOLGIN-2 ARL1, GOLGIN, GTPASE, G-PROTEIN, GOLGI, GRIP DIMER, PROTEIN VESICLE TRAFFICKING, HYDROLASE-PROTEIN-BINDING COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1UPT     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  A 169 1289 56
2  Protein   GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A MEMBER 4  B 58 455 32
3  Protein   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  C 163 1243 48
4  Protein   GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A MEMBER 4  D 52 402 32
5  Protein   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  E 168 1280 56
6  Protein   GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A MEMBER 4  F 56 443 32
7  Protein   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  G 170 1290 56
8  Protein   GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A MEMBER 4  H 51 402 24
9  Ligand   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  A 2 0 33
10  Ligand   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  C 2 0 33
11  Ligand   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  E 2 0 33
12  Ligand   ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1  G 2 0 33
13 Water     270 0 270
total       1165 6804 738
Proteins
Unit 1 HIS13 MSE14 THR15 ARG16 GLU17 MSE18 ARG19 ILE20 LEU21 ILE22 LEU23 GLY24 LEU25 ASP26 GLY27 ALA28 GLY29 LYS30 THR31 THR32 ILE33 LEU34 TYR35 ARG36 LEU37 GLN38 VAL39 GLY40 GLU41 VAL42 VAL43 THR44 THR45 ILE46 PRO47 THR48 ILE49 GLY50 PHE51 ASN52 VAL53 GLU54 THR55 VAL56 THR57 TYR58 LYS59 ASN60 LEU61 LYS62 PHE63 GLN64 VAL65 TRP66 ASP67 LEU68 GLY69 GLY70 LEU71 THR72 SER73 ILE74 ARG75 PRO76 TYR77 TRP78 ARG79 CYS80 TYR81 TYR82 SER83 ASN84 THR85 ASP86 ALA87 VAL88 ILE89 TYR90 VAL91 VAL92 ASP93 SER94 CYS95 ASP96 ARG97 ASP98 ARG99 ILE100 GLY101 ILE102 SER103 LYS104 SER105 GLU106 LEU107 VAL108 ALA109 MSE110 LEU111 GLU112 GLU113 GLU114 GLU115 LEU116 ARG117 LYS118 ALA119 ILE120 LEU121 VAL122 VAL123 PHE124 ALA125 ASN126 LYS127 GLN128 ASP129 MSE130 GLU131 GLN132 ALA133 MSE134 THR135 SER136 SER137 GLU138 MSE139 ALA140 ASN141 SER142 LEU143 GLY144 LEU145 PRO146 ALA147 LEU148 LYS149 ASP150 ARG151 LYS152 TRP153 GLN154 ILE155 PHE156 LYS157 THR158 SER159 ALA160 THR161 LYS162 GLY163 THR164 GLY165 LEU166 ASP167 GLU168 ALA169 MSE170 GLU171 TRP172 LEU173 VAL174 GLU175 THR176 LEU177 LYS178 SER179 ARG180 GLN181
Unit 2 GLU2171 PRO2172 THR2173 GLU2174 PHE2175 GLU2176 TYR2177 LEU2178 ARG2179 LYS2180 VAL2181 LEU2182 PHE2183 GLU2184 TYR2185 MSE2186 MSE2187 GLY2188 ARG2189 GLU2190 THR2191 LYS2192 THR2193 MSE2194 ALA2195 LYS2196 VAL2197 ILE2198 THR2199 THR2200 VAL2201 LEU2202 LYS2203 PHE2204 PRO2205 ASP2206 ASP2207 GLN2208 THR2209 GLN2210 LYS2211 ILE2212 LEU2213 GLU2214 ARG2215 GLU2216 ASP2217 ALA2218 ARG2219 LEU2220 MSE2221 SER2222 TRP2223 LEU2224 ARG2225 SER2226 SER2227 SER2228
Unit 3 MSE18 ARG19 ILE20 LEU21 ILE22 LEU23 GLY24 LEU25 ASP26 GLY27 ALA28 GLY29 LYS30 THR31 THR32 ILE33 LEU34 TYR35 ARG36 LEU37 GLN38 VAL39 GLY40 GLU41 VAL42 VAL43 THR44 THR45 ILE46 PRO47 THR48 ILE49 GLY50 PHE51 ASN52 VAL53 GLU54 THR55 VAL56 THR57 TYR58 LYS59 ASN60 LEU61 LYS62 PHE63 GLN64 VAL65 TRP66 ASP67 LEU68 GLY69 GLY70 LEU71 THR72 SER73 ILE74 ARG75 PRO76 TYR77 TRP78 ARG79 CYS80 TYR81 TYR82 SER83 ASN84 THR85 ASP86 ALA87 VAL88 ILE89 TYR90 VAL91 VAL92 ASP93 SER94 CYS95 ASP96 ARG97 ASP98 ARG99 ILE100 GLY101 ILE102 SER103 LYS104 SER105 GLU106 LEU107 VAL108 ALA109 MSE110 LEU111 GLU112 GLU113 GLU114 GLU115 LEU116 ARG117 LYS118 ALA119 ILE120 LEU121 VAL122 VAL123 PHE124 ALA125 ASN126 LYS127 GLN128 ASP129 MSE130 GLU131 GLN132 ALA133 MSE134 THR135 SER136 SER137 GLU138 MSE139 ALA140 ASN141 SER142 LEU143 GLY144 LEU145 PRO146 ALA147 LEU148 LYS149 ASP150 ARG151 LYS152 TRP153 GLN154 ILE155 PHE156 LYS157 THR158 SER159 ALA160 THR161 LYS162 GLY163 THR164 GLY165 LEU166 ASP167 GLU168 ALA169 MSE170 GLU171 TRP172 LEU173 VAL174 GLU175 THR176 LEU177 LYS178 SER179 ARG180
Unit 4 GLY2170 GLU2171 PRO2172 THR2173 GLU2174 PHE2175 GLU2176 TYR2177 LEU2178 ARG2179 LYS2180 VAL2181 LEU2182 PHE2183 GLU2184 TYR2185 MSE2186 MSE2187 GLY2188 ARG2189 GLU2190 THR2191 LYS2192 THR2193 MSE2194 ALA2195 LYS2196 VAL2197 ILE2198 THR2199 THR2200 VAL2201 LEU2202 LYS2203 PHE2204 PRO2205 ASP2206 ASP2207 GLN2208 THR2209 GLN2210 LYS2211 ILE2212 LEU2213 GLU2214 ARG2215 GLU2216 ASP2217 ALA2218 ARG2219 LEU2220 MSE2221
Unit 5 HIS13 MSE14 THR15 ARG16 GLU17 MSE18 ARG19 ILE20 LEU21 ILE22 LEU23 GLY24 LEU25 ASP26 GLY27 ALA28 GLY29 LYS30 THR31 THR32 ILE33 LEU34 TYR35 ARG36 LEU37 GLN38 VAL39 GLY40 GLU41 VAL42 VAL43 THR44 THR45 ILE46 PRO47 THR48 ILE49 GLY50 PHE51 ASN52 VAL53 GLU54 THR55 VAL56 THR57 TYR58 LYS59 ASN60 LEU61 LYS62 PHE63 GLN64 VAL65 TRP66 ASP67 LEU68 GLY69 GLY70 LEU71 THR72 SER73 ILE74 ARG75 PRO76 TYR77 TRP78 ARG79 CYS80 TYR81 TYR82 SER83 ASN84 THR85 ASP86 ALA87 VAL88 ILE89 TYR90 VAL91 VAL92 ASP93 SER94 CYS95 ASP96 ARG97 ASP98 ARG99 ILE100 GLY101 ILE102 SER103 LYS104 SER105 GLU106 LEU107 VAL108 ALA109 MSE110 LEU111 GLU112 GLU113 GLU114 GLU115 LEU116 ARG117 LYS118 ALA119 ILE120 LEU121 VAL122 VAL123 PHE124 ALA125 ASN126 LYS127 GLN128 ASP129 MSE130 GLU131 GLN132 ALA133 MSE134 THR135 SER136 SER137 GLU138 MSE139 ALA140 ASN141 SER142 LEU143 GLY144 LEU145 PRO146 ALA147 LEU148 LYS149 ASP150 ARG151 LYS152 TRP153 GLN154 ILE155 PHE156 LYS157 THR158 SER159 ALA160 THR161 LYS162 GLY163 THR164 GLY165 LEU166 ASP167 GLU168 ALA169 MSE170 GLU171 TRP172 LEU173 VAL174 GLU175 THR176 LEU177 LYS178 SER179 ARG180
Unit 6 GLU2171 PRO2172 THR2173 GLU2174 PHE2175 GLU2176 TYR2177 LEU2178 ARG2179 LYS2180 VAL2181 LEU2182 PHE2183 GLU2184 TYR2185 MSE2186 MSE2187 GLY2188 ARG2189 GLU2190 THR2191 LYS2192 THR2193 MSE2194 ALA2195 LYS2196 VAL2197 ILE2198 THR2199 THR2200 VAL2201 LEU2202 LYS2203 PHE2204 PRO2205 ASP2206 ASP2207 GLN2208 THR2209 GLN2210 LYS2211 ILE2212 LEU2213 GLU2214 ARG2215 GLU2216 ASP2217 ALA2218 ARG2219 LEU2220 MSE2221 SER2222 TRP2223 LEU2224 ARG2225 SER2226
Unit 7 GLY11 SER12 HIS13 MSE14 THR15 ARG16 GLU17 MSE18 ARG19 ILE20 LEU21 ILE22 LEU23 GLY24 LEU25 ASP26 GLY27 ALA28 GLY29 LYS30 THR31 THR32 ILE33 LEU34 TYR35 ARG36 LEU37 GLN38 VAL39 GLY40 GLU41 VAL42 VAL43 THR44 THR45 ILE46 PRO47 THR48 ILE49 GLY50 PHE51 ASN52 VAL53 GLU54 THR55 VAL56 THR57 TYR58 LYS59 ASN60 LEU61 LYS62 PHE63 GLN64 VAL65 TRP66 ASP67 LEU68 GLY69 GLY70 LEU71 THR72 SER73 ILE74 ARG75 PRO76 TYR77 TRP78 ARG79 CYS80 TYR81 TYR82 SER83 ASN84 THR85 ASP86 ALA87 VAL88 ILE89 TYR90 VAL91 VAL92 ASP93 SER94 CYS95 ASP96 ARG97 ASP98 ARG99 ILE100 GLY101 ILE102 SER103 LYS104 SER105 GLU106 LEU107 VAL108 ALA109 MSE110 LEU111 GLU112 GLU113 GLU114 GLU115 LEU116 ARG117 LYS118 ALA119 ILE120 LEU121 VAL122 VAL123 PHE124 ALA125 ASN126 LYS127 GLN128 ASP129 MSE130 GLU131 GLN132 ALA133 MSE134 THR135 SER136 SER137 GLU138 MSE139 ALA140 ASN141 SER142 LEU143 GLY144 LEU145 PRO146 ALA147 LEU148 LYS149 ASP150 ARG151 LYS152 TRP153 GLN154 ILE155 PHE156 LYS157 THR158 SER159 ALA160 THR161 LYS162 GLY163 THR164 GLY165 LEU166 ASP167 GLU168 ALA169 MSE170 GLU171 TRP172 LEU173 VAL174 GLU175 THR176 LEU177 LYS178 SER179 ARG180
Unit 8 GLY2170 GLU2171 PRO2172 THR2173 GLU2174 PHE2175 GLU2176 TYR2177 LEU2178 ARG2179 LYS2180 VAL2181 LEU2182 PHE2183 GLU2184 TYR2185 MSE2186 MSE2187 GLY2188 ARG2189 GLU2190 THR2191 LYS2192 THR2193 MSE2194 ALA2195 LYS2196 VAL2197 ILE2198 THR2199 THR2200 VAL2201 LEU2202 LYS2203 PHE2204 PRO2205 ASP2206 ASP2207 GLN2208 THR2209 GLN2210 LYS2211 ILE2212 LEU2213 GLU2214 ARG2215 GLU2216 ASP2217 ALA2218 ARG2219 LEU2220
Ligands
Unit 9 GTP1182 MG1183
Unit 10 GTP1181 MG1182
Unit 11 GTP1181 MG1182
Unit 12 GTP1181 MG1182
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany