1UKV - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF RABGDP-DISSOCIATION INHIBITOR IN COMPLEX WITH PRENYLATED YPT1 GTPASE
• Keywords: GTPASE, HYDROLASE, GDP DISSOCIATION INHIBITOR, VESICULAR TRANSPORT, PROTEIN TRANSPORT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1UKV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SECRETORY PATHWAY GDP DISSOCIATION INHIBITOR	G	442	3528	0
2	Protein	GTP-BINDING PROTEIN YPT1	Y	197	1572	0
3	Ligand	GTP-BINDING PROTEIN YPT1	Y	3	0	49
4	Water			912	0	912
total				1554	5100	961

Proteins

Unit 1

THR 5 ILE 6 ASP 7 THR 8 ASP 9 TYR 10 ASP 11 VAL 12 ILE 13 VAL 14 LEU 15 GLY 16 THR 17 GLY 18 ILE 19 THR 20 GLU 21 CYS 22 ILE 23 LEU 24 SER 25 GLY 26 LEU 27 LEU 28 SER 29 VAL 30 ASP 31 GLY 32 LYS 33 LYS 34 VAL 35 LEU 36 HIS 37 ILE 38 ASP 39 LYS 40 GLN 41 ASP 42 HIS 43 TYR 44 GLY 45 GLY 46 GLU 47 ALA 48 ALA 49 SER 50 VAL 51 THR 52 LEU 53 SER 54 GLN 55 LEU 56 TYR 57 GLU 58 LYS 59 PHE 60 LYS 61 GLN 62 ASN 63 PRO 64 ILE 65 SER 66 LYS 67 GLU 68 GLU 69 ARG 70 GLU 71 SER 72 LYS 73 PHE 74 GLY 75 LYS 76 ASP 77 ARG 78 ASP 79 TRP 80 ASN 81 VAL 82 ASP 83 LEU 84 ILE 85 PRO 86 LYS 87 PHE 88 LEU 89 MET 90 ALA 91 ASN 92 GLY 93 GLU 94 LEU 95 THR 96 ASN 97 ILE 98 LEU 99 ILE 100 HIS 101 THR 102 ASP 103 VAL 104 THR 105 ARG 106 TYR 107 VAL 108 ASP 109 PHE 110 LYS 111 GLN 112 VAL 113 SER 114 GLY 115 SER 116 TYR 117 VAL 118 PHE 119 LYS 120 GLN 121 GLY 122 LYS 123 ILE 124 TYR 125 LYS 126 VAL 127 PRO 128 ALA 129 ASN 130 GLU 131 ILE 132 GLU 133 ALA 134 ILE 135 SER 136 SER 137 PRO 138 LEU 139 MET 140 GLY 141 ILE 142 PHE 143 GLU 144 LYS 145 ARG 146 ARG 147 MET 148 LYS 149 LYS 150 PHE 151 LEU 152 GLU 153 TRP 154 ILE 155 SER 156 SER 157 TYR 158 LYS 159 GLU 160 ASP 161 ASP 162 LEU 163 SER 164 THR 165 HIS 166 GLN 167 GLY 168 LEU 169 ASP 170 LEU 171 ASP 172 LYS 173 ASN 174 THR 175 MET 176 ASP 177 GLU 178 VAL 179 TYR 180 TYR 181 LYS 182 PHE 183 GLY 184 LEU 185 GLY 186 ASN 187 SER 188 THR 189 LYS 190 GLU 191 PHE 192 ILE 193 GLY 194 HIS 195 ALA 196 MET 197 ALA 198 LEU 199 TRP 200 THR 201 ASN 202 ASP 203 ASP 204 TYR 205 LEU 206 GLN 207 GLN 208 PRO 209 ALA 210 ARG 211 PRO 212 SER 213 PHE 214 GLU 215 ARG 216 ILE 217 LEU 218 LEU 219 TYR 220 CYS 221 GLN 222 SER 223 VAL 224 ALA 225 ARG 226 TYR 227 GLY 228 LYS 229 SER 230 PRO 231 TYR 232 LEU 233 TYR 234 PRO 235 MET 236 TYR 237 GLY 238 LEU 239 GLY 240 GLU 241 LEU 242 PRO 243 GLN 244 GLY 245 PHE 246 ALA 247 ARG 248 LEU 249 SER 250 ALA 251 ILE 252 TYR 253 GLY 254 GLY 255 THR 256 TYR 257 MET 258 LEU 259 ASP 260 THR 261 PRO 262 ILE 263 ASP 264 GLU 265 VAL 266 LEU 267 TYR 268 LYS 269 LYS 270 ASP 271 THR 272 GLY 273 LYS 274 PHE 275 GLU 276 GLY 277 VAL 278 LYS 279 THR 280 LYS 281 LEU 282 GLY 283 THR 284 PHE 285 LYS 286 ALA 287 PRO 288 LEU 289 VAL 290 ILE 291 ALA 292 ASP 293 PRO 294 THR 295 TYR 296 PHE 297 PRO 298 GLU 299 LYS 300 CYS 301 LYS 302 SER 303 THR 304 GLY 305 GLN 306 ARG 307 VAL 308 ILE 309 ARG 310 ALA 311 ILE 312 CYS 313 ILE 314 LEU 315 ASN 316 HIS 317 PRO 318 VAL 319 PRO 320 ASN 321 THR 322 SER 323 ASN 324 ALA 325 ASP 326 SER 327 LEU 328 GLN 329 ILE 330 ILE 331 ILE 332 PRO 333 GLN 334 SER 335 GLN 336 LEU 337 GLY 338 ARG 339 LYS 340 SER 341 ASP 342 ILE 343 TYR 344 VAL 345 ALA 346 ILE 347 VAL 348 SER 349 ASP 350 ALA 351 HIS 352 ASN 353 VAL 354 CYS 355 SER 356 LYS 357 GLY 358 HIS 359 TYR 360 LEU 361 ALA 362 ILE 363 ILE 364 SER 365 THR 366 ILE 367 ILE 368 GLU 369 THR 370 ASP 371 LYS 372 PRO 373 HIS 374 ILE 375 GLU 376 LEU 377 GLU 378 PRO 379 ALA 380 PHE 381 LYS 382 LEU 383 LEU 384 GLY 385 PRO 386 ILE 387 GLU 388 GLU 389 LYS 390 PHE 391 MET 392 GLY 393 ILE 394 ALA 395 GLU 396 LEU 397 PHE 398 GLU 399 PRO 400 ARG 401 GLU 402 ASP 403 GLY 404 SER 405 LYS 406 ASP 407 ASN 408 ILE 409 TYR 410 LEU 411 SER 412 ARG 413 SER 414 TYR 415 ASP 416 ALA 417 SER 418 SER 419 HIS 420 PHE 421 GLU 422 SER 423 MET 424 THR 425 ASP 426 ASP 427 VAL 428 LYS 429 ASP 430 ILE 431 TYR 432 PHE 433 ARG 434 VAL 435 THR 436 GLY 437 HIS 438 PRO 439 LEU 440 VAL 441 LEU 442 LYS 443 GLN 444 ARG 445 GLN 446

Unit 2

SER 3 GLU 4 TYR 5 ASP 6 TYR 7 LEU 8 PHE 9 LYS 10 LEU 11 LEU 12 LEU 13 ILE 14 GLY 15 ASN 16 SER 17 GLY 18 VAL 19 GLY 20 LYS 21 SER 22 CYS 23 LEU 24 LEU 25 LEU 26 ARG 27 PHE 28 SER 29 ASP 30 ASP 31 THR 32 TYR 33 THR 34 ASN 35 ASP 36 TYR 37 ILE 38 SER 39 THR 40 ILE 41 GLY 42 VAL 43 ASP 44 PHE 45 LYS 46 ILE 47 LYS 48 THR 49 VAL 50 GLU 51 LEU 52 ASP 53 GLY 54 LYS 55 THR 56 VAL 57 LYS 58 LEU 59 GLN 60 ILE 61 TRP 62 ASP 63 THR 64 ALA 65 GLY 66 GLN 67 GLU 68 ARG 69 PHE 70 ARG 71 THR 72 ILE 73 THR 74 SER 75 SER 76 TYR 77 TYR 78 ARG 79 GLY 80 SER 81 HIS 82 GLY 83 ILE 84 ILE 85 ILE 86 VAL 87 TYR 88 ASP 89 VAL 90 THR 91 ASP 92 GLN 93 GLU 94 SER 95 PHE 96 ASN 97 GLY 98 VAL 99 LYS 100 MET 101 TRP 102 LEU 103 GLN 104 GLU 105 ILE 106 ASP 107 ARG 108 TYR 109 ALA 110 THR 111 SER 112 THR 113 VAL 114 LEU 115 LYS 116 LEU 117 LEU 118 VAL 119 GLY 120 ASN 121 LYS 122 CYS 123 ASP 124 LEU 125 LYS 126 ASP 127 LYS 128 ARG 129 VAL 130 VAL 131 GLU 132 TYR 133 ASP 134 VAL 135 ALA 136 LYS 137 GLU 138 PHE 139 ALA 140 ASP 141 ALA 142 ASN 143 LYS 144 MET 145 PRO 146 PHE 147 LEU 148 GLU 149 THR 150 SER 151 ALA 152 LEU 153 ASP 154 SER 155 THR 156 ASN 157 VAL 158 GLU 159 ASP 160 ALA 161 PHE 162 LEU 163 THR 164 MET 165 ALA 166 ARG 167 GLN 168 ILE 169 LYS 170 GLU 171 SER 172 MET 173 SER 174 GLN 175 GLN 176 ASN 177 LEU 178 ASN 179 GLU 180 THR 181 THR 182 GLN 183 LYS 184 LYS 185 GLU 186 ASP 187 LYS 188 GLY 189 ASN 190 VAL 191 ASN 192 LEU 193 LYS 194 GLY 195 GLN 196 SER 197 LEU 198 CYS 206

Ligands

Unit 3

GER 1206 GDP 1207 MG 1208