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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND FUNCTION OF YBDK
Keywords STRUCTURAL GENOMICS, UNKNOWN FUNCTION, YBDK, HYPOTHETICAL PR CARBOXYLATE-AMINE LIGASE, STRUCTURE 2 FUNCTION PROJECT, S2F
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1R8G     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL PROTEIN YBDK  A 352 2683 80
2  Protein   HYPOTHETICAL PROTEIN YBDK  B 358 2735 80
3 Water     656 0 656
total       1366 5418 816

Proteins
Unit 1 LEU3 PRO4 ASP5 PHE6 HIS7 VAL8 SER9 GLU10 PRO11 PHE12 THR13 LEU14 GLY15 ILE16 GLU17 LEU18 GLU19 MSE20 GLN21 VAL22 VAL23 ASN24 PRO25 PRO26 GLY27 TYR28 ASP29 LEU30 SER31 GLN32 ASP33 SER34 SER35 MSE36 LEU37 ILE38 ASP39 ALA40 VAL41 LYS42 ASN43 LYS44 ILE45 THR46 ALA47 GLY48 GLU49 VAL50 LYS51 HIS52 ASP53 ILE54 THR55 GLU56 SER57 MSE58 LEU59 GLU60 LEU61 ALA62 THR63 ASP64 VAL65 CYS66 ARG67 ASP68 ILE69 ASN70 GLN71 ALA72 ALA73 GLY74 GLN75 PHE76 SER77 ALA78 MSE79 GLN80 LYS81 VAL82 VAL83 LEU84 GLN85 ALA86 ALA87 THR88 ASP89 HIS90 HIS91 LEU92 GLU93 ILE94 CYS95 GLY96 GLY97 GLY98 THR99 HIS100 PRO101 PHE102 GLN103 LYS104 TRP105 ASN122 PHE123 GLY124 TYR125 LEU126 ILE127 GLN128 GLN129 ALA130 THR131 VAL132 PHE133 GLY134 GLN135 HIS136 VAL137 HIS138 VAL139 GLY140 CYS141 ALA142 SER143 GLY144 ASP145 ASP146 ALA147 ILE148 TYR149 LEU150 LEU151 HIS152 GLY153 LEU154 SER155 ARG156 PHE157 VAL158 PRO159 HIS160 PHE161 ILE162 ALA163 LEU164 SER165 ALA166 ALA167 SER168 PRO169 TYR170 MSE171 GLN172 GLY173 THR174 ASP175 THR176 ARG177 PHE178 ALA179 SER180 SER181 ARG182 PRO183 ASN184 ILE185 PHE186 SER187 ALA188 PHE189 PRO190 ASP191 ASN192 GLY193 PRO194 MSE195 PRO196 TRP197 VAL198 SER199 ASN200 TRP201 GLN202 GLN203 PHE204 GLU205 ALA206 LEU207 PHE208 ARG209 CYS210 LEU211 SER212 TYR213 THR214 THR215 MSE216 ILE217 ASP218 SER219 ILE220 LYS221 ASP222 LEU223 HIS224 TRP225 ASP226 ILE227 ARG228 PRO229 SER230 PRO231 HIS232 PHE233 GLY234 THR235 VAL236 GLU237 VAL238 ARG239 VAL240 MSE241 ASP242 THR243 PRO244 LEU245 THR246 LEU247 SER248 HIS249 ALA250 VAL251 ASN252 MSE253 ALA254 GLY255 LEU256 ILE257 GLN258 ALA259 THR260 ALA261 HIS262 TRP263 LEU264 LEU265 THR266 GLU267 ARG268 PRO269 PHE270 LYS271 HIS272 GLN273 GLU274 LYS275 ASP276 TYR277 LEU278 LEU279 TYR280 LYS281 PHE282 ASN283 ARG284 PHE285 GLN286 ALA287 CYS288 ARG289 TYR290 GLY291 LEU292 GLU293 GLY294 VAL295 ILE296 THR297 ASP298 PRO299 HIS300 THR301 GLY302 ASP303 ARG304 ARG305 PRO306 LEU307 THR308 GLU309 ASP310 THR311 LEU312 ARG313 LEU314 LEU315 GLU316 LYS317 ILE318 ALA319 PRO320 SER321 ALA322 HIS323 LYS324 ILE325 GLY326 ALA327 SER328 SER329 ALA330 ILE331 GLU332 ALA333 LEU334 HIS335 ARG336 GLN337 VAL338 VAL339 SER340 GLY341 LEU342 ASN343 GLU344 ALA345 GLN346 LEU347 MSE348 ARG349 ASP350 PHE351 VAL352 ALA353 ASP354 GLY355 GLY356 SER357 LEU358 ILE359 GLY360 LEU361 VAL362 LYS363 LYS364 HIS365 CYS366 GLU367 ILE368 TRP369 ALA370
Unit 2 PRO2 LEU3 PRO4 ASP5 PHE6 HIS7 VAL8 SER9 GLU10 PRO11 PHE12 THR13 LEU14 GLY15 ILE16 GLU17 LEU18 GLU19 MSE20 GLN21 VAL22 VAL23 ASN24 PRO25 PRO26 GLY27 TYR28 ASP29 LEU30 SER31 GLN32 ASP33 SER34 SER35 MSE36 LEU37 ILE38 ASP39 ALA40 VAL41 LYS42 ASN43 LYS44 ILE45 THR46 ALA47 GLY48 GLU49 VAL50 LYS51 HIS52 ILE54 THR55 GLU56 SER57 MSE58 LEU59 GLU60 LEU61 ALA62 THR63 ASP64 VAL65 CYS66 ARG67 ASP68 ILE69 ASN70 GLN71 ALA72 ALA73 GLY74 GLN75 PHE76 SER77 ALA78 MSE79 GLN80 LYS81 VAL82 VAL83 LEU84 GLN85 ALA86 ALA87 THR88 ASP89 HIS90 HIS91 LEU92 GLU93 ILE94 CYS95 GLY96 GLY97 GLY98 THR99 HIS100 PRO101 PHE102 GLN103 LYS104 TRP105 GLN106 GLN117 ARG118 THR119 LEU120 GLU121 ASN122 PHE123 GLY124 TYR125 LEU126 ILE127 GLN128 GLN129 ALA130 THR131 VAL132 PHE133 GLY134 GLN135 HIS136 VAL137 HIS138 VAL139 GLY140 CYS141 ALA142 SER143 GLY144 ASP145 ASP146 ALA147 ILE148 TYR149 LEU150 LEU151 HIS152 GLY153 LEU154 SER155 ARG156 PHE157 VAL158 PRO159 HIS160 PHE161 ILE162 ALA163 LEU164 SER165 ALA166 ALA167 SER168 PRO169 TYR170 MSE171 GLN172 GLY173 THR174 ASP175 THR176 ARG177 PHE178 ALA179 SER180 SER181 ARG182 PRO183 ASN184 ILE185 PHE186 SER187 ALA188 PHE189 PRO190 ASP191 ASN192 GLY193 PRO194 MSE195 PRO196 TRP197 VAL198 SER199 ASN200 TRP201 GLN202 GLN203 PHE204 GLU205 ALA206 LEU207 PHE208 ARG209 CYS210 LEU211 SER212 TYR213 THR214 THR215 MSE216 ILE217 ASP218 SER219 ILE220 LYS221 ASP222 LEU223 HIS224 TRP225 ASP226 ILE227 ARG228 PRO229 SER230 PRO231 HIS232 PHE233 GLY234 THR235 VAL236 GLU237 VAL238 ARG239 VAL240 MSE241 ASP242 THR243 PRO244 LEU245 THR246 LEU247 SER248 HIS249 ALA250 VAL251 ASN252 MSE253 ALA254 GLY255 LEU256 ILE257 GLN258 ALA259 THR260 ALA261 HIS262 TRP263 LEU264 LEU265 THR266 GLU267 ARG268 PRO269 PHE270 LYS271 HIS272 GLN273 GLU274 LYS275 ASP276 TYR277 LEU278 LEU279 TYR280 LYS281 PHE282 ASN283 ARG284 PHE285 GLN286 ALA287 CYS288 ARG289 TYR290 GLY291 LEU292 GLU293 GLY294 VAL295 ILE296 THR297 ASP298 PRO299 HIS300 THR301 GLY302 ASP303 ARG304 ARG305 PRO306 LEU307 THR308 GLU309 ASP310 THR311 LEU312 ARG313 LEU314 LEU315 GLU316 LYS317 ILE318 ALA319 PRO320 SER321 ALA322 HIS323 LYS324 ILE325 GLY326 ALA327 SER328 SER329 ALA330 ILE331 GLU332 ALA333 LEU334 HIS335 ARG336 GLN337 VAL338 VAL339 SER340 GLY341 LEU342 ASN343 GLU344 ALA345 GLN346 LEU347 MSE348 ARG349 ASP350 PHE351 VAL352 ALA353 ASP354 GLY355 GLY356 SER357 LEU358 ILE359 GLY360 LEU361 VAL362 LYS363 LYS364 HIS365 CYS366 GLU367 ILE368 TRP369 ALA370

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany