1PPR - Sequence, Chains, Asymmetric and Biological Units

• Title: PERIDININ-CHLOROPHYLL-PROTEIN OF AMPHIDINIUM CARTERAE
• Keywords: LIGHT HARVESTING PROTEIN, PHOTOSYNTHESIS, CAROTENOIDS, DINOFLAGELLATES, LIGHT-HARVESTING PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1PPR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PERIDININ-CHLOROPHYLL PROTEIN	M	312	2282	0
2	Protein	PERIDININ-CHLOROPHYLL PROTEIN	N	312	2282	0
3	Protein	PERIDININ-CHLOROPHYLL PROTEIN	O	312	2282	0
4	Ligand	PERIDININ-CHLOROPHYLL PROTEIN	M	12	0	630
5	Ligand	PERIDININ-CHLOROPHYLL PROTEIN	O	1	0	46
6	Ligand	PERIDININ-CHLOROPHYLL PROTEIN	N	12	0	630
7	Ligand	PERIDININ-CHLOROPHYLL PROTEIN	O	11	0	584
8	Water			416	0	416
total				1388	6846	2306

Proteins

Unit 1	ASP 1 GLU 2 ILE 3 GLY 4 ASP 5 ALA 6 ALA 7 LYS 8 LYS 9 LEU 10 GLY 11 ASP 12 ALA 13 SER 14 TYR 15 ALA 16 PHE 17 ALA 18 LYS 19 GLU 20 VAL 21 ASP 22 TRP 23 ASN 24 ASN 25 GLY 26 ILE 27 PHE 28 LEU 29 GLN 30 ALA 31 PRO 32 GLY 33 LYS 34 LEU 35 GLN 36 PRO 37 LEU 38 GLU 39 ALA 40 LEU 41 LYS 42 ALA 43 ILE 44 ASP 45 LYS 46 MET 47 ILE 48 VAL 49 MET 50 GLY 51 ALA 52 ALA 53 ALA 54 ASP 55 PRO 56 LYS 57 LEU 58 LEU 59 LYS 60 ALA 61 ALA 62 ALA 63 GLU 64 ALA 65 HIS 66 HIS 67 LYS 68 ALA 69 ILE 70 GLY 71 SER 72 ILE 73 SER 74 GLY 75 PRO 76 ASN 77 GLY 78 VAL 79 THR 80 SER 81 ARG 82 ALA 83 ASP 84 TRP 85 ASP 86 ASN 87 VAL 88 ASN 89 ALA 90 ALA 91 LEU 92 GLY 93 ARG 94 VAL 95 ILE 96 ALA 97 SER 98 VAL 99 PRO 100 GLU 101 ASN 102 MET 103 VAL 104 MET 105 ASP 106 VAL 107 TYR 108 ASP 109 SER 110 VAL 111 SER 112 LYS 113 ILE 114 THR 115 ASP 116 PRO 117 LYS 118 VAL 119 PRO 120 ALA 121 TYR 122 MET 123 LYS 124 SER 125 LEU 126 VAL 127 ASN 128 GLY 129 ALA 130 ASP 131 ALA 132 GLU 133 LYS 134 ALA 135 TYR 136 GLU 137 GLY 138 PHE 139 LEU 140 ALA 141 PHE 142 LYS 143 ASP 144 VAL 145 VAL 146 LYS 147 LYS 148 SER 149 GLN 150 VAL 151 THR 152 SER 153 ALA 154 ALA 155 GLY 156 PRO 157 ALA 158 THR 159 VAL 160 PRO 161 SER 162 GLY 163 ASP 164 LYS 165 ILE 166 GLY 167 VAL 168 ALA 169 ALA 170 GLN 171 GLN 172 LEU 173 SER 174 GLU 175 ALA 176 SER 177 TYR 178 PRO 179 PHE 180 LEU 181 LYS 182 GLU 183 ILE 184 ASP 185 TRP 186 LEU 187 SER 188 ASP 189 VAL 190 TYR 191 MET 192 LYS 193 PRO 194 LEU 195 PRO 196 GLY 197 VAL 198 SER 199 ALA 200 GLN 201 GLN 202 SER 203 LEU 204 LYS 205 ALA 206 ILE 207 ASP 208 LYS 209 MET 210 ILE 211 VAL 212 MET 213 GLY 214 ALA 215 GLN 216 ALA 217 ASP 218 GLY 219 ASN 220 ALA 221 LEU 222 LYS 223 ALA 224 ALA 225 ALA 226 GLU 227 ALA 228 HIS 229 HIS 230 LYS 231 ALA 232 ILE 233 GLY 234 SER 235 ILE 236 ASP 237 ALA 238 THR 239 GLY 240 VAL 241 THR 242 SER 243 ALA 244 ALA 245 ASP 246 TYR 247 ALA 248 ALA 249 VAL 250 ASN 251 ALA 252 ALA 253 LEU 254 GLY 255 ARG 256 VAL 257 ILE 258 ALA 259 SER 260 VAL 261 PRO 262 LYS 263 SER 264 THR 265 VAL 266 MET 267 ASP 268 VAL 269 TYR 270 ASN 271 ALA 272 MET 273 ALA 274 GLY 275 VAL 276 THR 277 ASP 278 THR 279 SER 280 ILE 281 PRO 282 LEU 283 ASN 284 MET 285 PHE 286 SER 287 LYS 288 VAL 289 ASN 290 PRO 291 LEU 292 ASP 293 ALA 294 ASN 295 ALA 296 ALA 297 ALA 298 LYS 299 ALA 300 PHE 301 TYR 302 THR 303 PHE 304 LYS 305 ASP 306 VAL 307 VAL 308 GLN 309 ALA 310 ALA 311 GLN 312
Unit 2	ASP 1 GLU 2 ILE 3 GLY 4 ASP 5 ALA 6 ALA 7 LYS 8 LYS 9 LEU 10 GLY 11 ASP 12 ALA 13 SER 14 TYR 15 ALA 16 PHE 17 ALA 18 LYS 19 GLU 20 VAL 21 ASP 22 TRP 23 ASN 24 ASN 25 GLY 26 ILE 27 PHE 28 LEU 29 GLN 30 ALA 31 PRO 32 GLY 33 LYS 34 LEU 35 GLN 36 PRO 37 LEU 38 GLU 39 ALA 40 LEU 41 LYS 42 ALA 43 ILE 44 ASP 45 LYS 46 MET 47 ILE 48 VAL 49 MET 50 GLY 51 ALA 52 ALA 53 ALA 54 ASP 55 PRO 56 LYS 57 LEU 58 LEU 59 LYS 60 ALA 61 ALA 62 ALA 63 GLU 64 ALA 65 HIS 66 HIS 67 LYS 68 ALA 69 ILE 70 GLY 71 SER 72 ILE 73 SER 74 GLY 75 PRO 76 ASN 77 GLY 78 VAL 79 THR 80 SER 81 ARG 82 ALA 83 ASP 84 TRP 85 ASP 86 ASN 87 VAL 88 ASN 89 ALA 90 ALA 91 LEU 92 GLY 93 ARG 94 VAL 95 ILE 96 ALA 97 SER 98 VAL 99 PRO 100 GLU 101 ASN 102 MET 103 VAL 104 MET 105 ASP 106 VAL 107 TYR 108 ASP 109 SER 110 VAL 111 SER 112 LYS 113 ILE 114 THR 115 ASP 116 PRO 117 LYS 118 VAL 119 PRO 120 ALA 121 TYR 122 MET 123 LYS 124 SER 125 LEU 126 VAL 127 ASN 128 GLY 129 ALA 130 ASP 131 ALA 132 GLU 133 LYS 134 ALA 135 TYR 136 GLU 137 GLY 138 PHE 139 LEU 140 ALA 141 PHE 142 LYS 143 ASP 144 VAL 145 VAL 146 LYS 147 LYS 148 SER 149 GLN 150 VAL 151 THR 152 SER 153 ALA 154 ALA 155 GLY 156 PRO 157 ALA 158 THR 159 VAL 160 PRO 161 SER 162 GLY 163 ASP 164 LYS 165 ILE 166 GLY 167 VAL 168 ALA 169 ALA 170 GLN 171 GLN 172 LEU 173 SER 174 GLU 175 ALA 176 SER 177 TYR 178 PRO 179 PHE 180 LEU 181 LYS 182 GLU 183 ILE 184 ASP 185 TRP 186 LEU 187 SER 188 ASP 189 VAL 190 TYR 191 MET 192 LYS 193 PRO 194 LEU 195 PRO 196 GLY 197 VAL 198 SER 199 ALA 200 GLN 201 GLN 202 SER 203 LEU 204 LYS 205 ALA 206 ILE 207 ASP 208 LYS 209 MET 210 ILE 211 VAL 212 MET 213 GLY 214 ALA 215 GLN 216 ALA 217 ASP 218 GLY 219 ASN 220 ALA 221 LEU 222 LYS 223 ALA 224 ALA 225 ALA 226 GLU 227 ALA 228 HIS 229 HIS 230 LYS 231 ALA 232 ILE 233 GLY 234 SER 235 ILE 236 ASP 237 ALA 238 THR 239 GLY 240 VAL 241 THR 242 SER 243 ALA 244 ALA 245 ASP 246 TYR 247 ALA 248 ALA 249 VAL 250 ASN 251 ALA 252 ALA 253 LEU 254 GLY 255 ARG 256 VAL 257 ILE 258 ALA 259 SER 260 VAL 261 PRO 262 LYS 263 SER 264 THR 265 VAL 266 MET 267 ASP 268 VAL 269 TYR 270 ASN 271 ALA 272 MET 273 ALA 274 GLY 275 VAL 276 THR 277 ASP 278 THR 279 SER 280 ILE 281 PRO 282 LEU 283 ASN 284 MET 285 PHE 286 SER 287 LYS 288 VAL 289 ASN 290 PRO 291 LEU 292 ASP 293 ALA 294 ASN 295 ALA 296 ALA 297 ALA 298 LYS 299 ALA 300 PHE 301 TYR 302 THR 303 PHE 304 LYS 305 ASP 306 VAL 307 VAL 308 GLN 309 ALA 310 ALA 311 GLN 312
Unit 3	ASP 1 GLU 2 ILE 3 GLY 4 ASP 5 ALA 6 ALA 7 LYS 8 LYS 9 LEU 10 GLY 11 ASP 12 ALA 13 SER 14 TYR 15 ALA 16 PHE 17 ALA 18 LYS 19 GLU 20 VAL 21 ASP 22 TRP 23 ASN 24 ASN 25 GLY 26 ILE 27 PHE 28 LEU 29 GLN 30 ALA 31 PRO 32 GLY 33 LYS 34 LEU 35 GLN 36 PRO 37 LEU 38 GLU 39 ALA 40 LEU 41 LYS 42 ALA 43 ILE 44 ASP 45 LYS 46 MET 47 ILE 48 VAL 49 MET 50 GLY 51 ALA 52 ALA 53 ALA 54 ASP 55 PRO 56 LYS 57 LEU 58 LEU 59 LYS 60 ALA 61 ALA 62 ALA 63 GLU 64 ALA 65 HIS 66 HIS 67 LYS 68 ALA 69 ILE 70 GLY 71 SER 72 ILE 73 SER 74 GLY 75 PRO 76 ASN 77 GLY 78 VAL 79 THR 80 SER 81 ARG 82 ALA 83 ASP 84 TRP 85 ASP 86 ASN 87 VAL 88 ASN 89 ALA 90 ALA 91 LEU 92 GLY 93 ARG 94 VAL 95 ILE 96 ALA 97 SER 98 VAL 99 PRO 100 GLU 101 ASN 102 MET 103 VAL 104 MET 105 ASP 106 VAL 107 TYR 108 ASP 109 SER 110 VAL 111 SER 112 LYS 113 ILE 114 THR 115 ASP 116 PRO 117 LYS 118 VAL 119 PRO 120 ALA 121 TYR 122 MET 123 LYS 124 SER 125 LEU 126 VAL 127 ASN 128 GLY 129 ALA 130 ASP 131 ALA 132 GLU 133 LYS 134 ALA 135 TYR 136 GLU 137 GLY 138 PHE 139 LEU 140 ALA 141 PHE 142 LYS 143 ASP 144 VAL 145 VAL 146 LYS 147 LYS 148 SER 149 GLN 150 VAL 151 THR 152 SER 153 ALA 154 ALA 155 GLY 156 PRO 157 ALA 158 THR 159 VAL 160 PRO 161 SER 162 GLY 163 ASP 164 LYS 165 ILE 166 GLY 167 VAL 168 ALA 169 ALA 170 GLN 171 GLN 172 LEU 173 SER 174 GLU 175 ALA 176 SER 177 TYR 178 PRO 179 PHE 180 LEU 181 LYS 182 GLU 183 ILE 184 ASP 185 TRP 186 LEU 187 SER 188 ASP 189 VAL 190 TYR 191 MET 192 LYS 193 PRO 194 LEU 195 PRO 196 GLY 197 VAL 198 SER 199 ALA 200 GLN 201 GLN 202 SER 203 LEU 204 LYS 205 ALA 206 ILE 207 ASP 208 LYS 209 MET 210 ILE 211 VAL 212 MET 213 GLY 214 ALA 215 GLN 216 ALA 217 ASP 218 GLY 219 ASN 220 ALA 221 LEU 222 LYS 223 ALA 224 ALA 225 ALA 226 GLU 227 ALA 228 HIS 229 HIS 230 LYS 231 ALA 232 ILE 233 GLY 234 SER 235 ILE 236 ASP 237 ALA 238 THR 239 GLY 240 VAL 241 THR 242 SER 243 ALA 244 ALA 245 ASP 246 TYR 247 ALA 248 ALA 249 VAL 250 ASN 251 ALA 252 ALA 253 LEU 254 GLY 255 ARG 256 VAL 257 ILE 258 ALA 259 SER 260 VAL 261 PRO 262 LYS 263 SER 264 THR 265 VAL 266 MET 267 ASP 268 VAL 269 TYR 270 ASN 271 ALA 272 MET 273 ALA 274 GLY 275 VAL 276 THR 277 ASP 278 THR 279 SER 280 ILE 281 PRO 282 LEU 283 ASN 284 MET 285 PHE 286 SER 287 LYS 288 VAL 289 ASN 290 PRO 291 LEU 292 ASP 293 ALA 294 ASN 295 ALA 296 ALA 297 ALA 298 LYS 299 ALA 300 PHE 301 TYR 302 THR 303 PHE 304 LYS 305 ASP 306 VAL 307 VAL 308 GLN 309 ALA 310 ALA 311 GLN 312

Ligands

Unit 4	CLA 601 CLA 602 PID 611 PID 612 PID 613 PID 614 DGD 615 PID 621 PID 622 PID 623 PID 624 DGD 625
Unit 5	PID 612
Unit 6	CLA 601 CLA 602 PID 611 PID 612 PID 613 PID 614 DGD 615 PID 621 PID 622 PID 623 PID 624 DGD 625
Unit 7	CLA 601 CLA 602 PID 611 PID 613 PID 614 DGD 615 PID 621 PID 622 PID 623 PID 624 DGD 625