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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DROSOPHILA DEOXYRIBONUCLEOTIDE KINASE C WITH THE SUBSTRATE DEOXYTHYMIDINE
Keywords PROTEIN-DEOXYNUCLEOSIDE COMPLEX, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1OT3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DEOXYRIBONUCLEOSIDE KINASE  A 197 1640 0
2  Protein   DEOXYRIBONUCLEOSIDE KINASE  B 192 1596 0
3  Protein   DEOXYRIBONUCLEOSIDE KINASE  C 197 1640 0
4  Protein   DEOXYRIBONUCLEOSIDE KINASE  D 191 1587 0
5  Protein   DEOXYRIBONUCLEOSIDE KINASE  E 192 1596 0
6  Protein   DEOXYRIBONUCLEOSIDE KINASE  F 192 1596 0
7  Protein   DEOXYRIBONUCLEOSIDE KINASE  G 192 1596 0
8  Protein   DEOXYRIBONUCLEOSIDE KINASE  H 192 1596 0
9  Ligand   DEOXYRIBONUCLEOSIDE KINASE  A 3 0 27
10  Ligand   DEOXYRIBONUCLEOSIDE KINASE  B 2 0 22
11  Ligand   DEOXYRIBONUCLEOSIDE KINASE  C 2 0 22
12  Ligand   DEOXYRIBONUCLEOSIDE KINASE  D 2 0 22
13  Ligand   DEOXYRIBONUCLEOSIDE KINASE  E 2 0 22
14  Ligand   DEOXYRIBONUCLEOSIDE KINASE  F 2 0 22
15  Ligand   DEOXYRIBONUCLEOSIDE KINASE  G 2 0 22
16  Ligand   DEOXYRIBONUCLEOSIDE KINASE  H 2 0 22
17 Water     310 0 310
total       1872 12847 491
Proteins
Unit 1 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 ARG195 ARG196 PRO197 GLN198 SER199 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 2 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 3 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 ARG195 ARG196 PRO197 GLN198 SER199 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 4 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 5 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 6 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 7 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Unit 8 THR12 LYS13 TYR14 ALA15 GLU16 GLY17 THR18 GLN19 PRO20 PHE21 THR22 VAL23 LEU24 ILE25 GLU26 GLY27 ASN28 ILE29 GLY30 SER31 GLY32 LYS33 THR34 THR35 TYR36 LEU37 ASN38 HIS39 PHE40 GLU41 LYS42 TYR43 LYS44 ASN45 ASP46 ILE47 CYS48 LEU49 LEU50 THR51 GLU52 PRO53 VAL54 GLU55 LYS56 TRP57 ARG58 ASN59 VAL60 ASN61 GLY62 VAL63 ASN64 LEU65 LEU66 GLU67 LEU68 MET69 TYR70 LYS71 ASP72 PRO73 LYS74 LYS75 TRP76 ALA77 MET78 PRO79 PHE80 GLN81 SER82 TYR83 VAL84 THR85 LEU86 THR87 MET88 LEU89 GLN90 SER91 HIS92 THR93 ALA94 PRO95 THR96 ASN97 LYS98 LYS99 LEU100 LYS101 ILE102 MET103 GLU104 ARG105 SER106 ILE107 PHE108 SER109 ALA110 ARG111 TYR112 CYS113 PHE114 VAL115 GLU116 ASN117 MET118 ARG119 ARG120 ASN121 GLY122 SER123 LEU124 GLU125 GLN126 GLY127 MET128 TYR129 ASN130 THR131 LEU132 GLU133 GLU134 TRP135 TYR136 LYS137 PHE138 ILE139 GLU140 GLU141 SER142 ILE143 HIS144 VAL145 GLN146 ALA147 ASP148 LEU149 ILE150 ILE151 TYR152 LEU153 ARG154 THR155 SER156 PRO157 GLU158 VAL159 ALA160 TYR161 GLU162 ARG163 ILE164 ARG165 GLN166 ARG167 ALA168 ARG169 SER170 GLU171 GLU172 SER173 CYS174 VAL175 PRO176 LEU177 LYS178 TYR179 LEU180 GLN181 GLU182 LEU183 HIS184 GLU185 LEU186 HIS187 GLU188 ASP189 TRP190 LEU191 ILE192 HIS193 GLN194 CYS200 LYS201 VAL202 LEU203 VAL204 LEU205 ASP206 ALA207 ASP208
Ligands
Unit 9 SO41300 SO41308 THM1400
Unit 10 SO41306 THM1406
Unit 11 SO41305 THM1405
Unit 12 SO41301 THM1401
Unit 13 SO41302 THM1402
Unit 14 SO41304 THM1404
Unit 15 SO41303 THM1403
Unit 16 SO41307 THM1407
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany