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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND LOCATION OF GENE PRODUCT 8 IN THE BACTERIOPHAGE T4 BASEPLATE
Keywords BACTERIOPHAGE T4, BASEPLATE, DIMER, BETA SANDWICH, VIRAL PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1N7Z     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BASEPLATE STRUCTURAL PROTEIN GP8  A 328 2535 96
2  Protein   BASEPLATE STRUCTURAL PROTEIN GP8  B 328 2535 96
3  Protein   BASEPLATE STRUCTURAL PROTEIN GP8  C 328 2535 96
4  Protein   BASEPLATE STRUCTURAL PROTEIN GP8  D 328 2535 96
5  Ligand   BASEPLATE STRUCTURAL PROTEIN GP8  A 9 0 9
6  Ligand   BASEPLATE STRUCTURAL PROTEIN GP8  B 6 0 6
7  Ligand   BASEPLATE STRUCTURAL PROTEIN GP8  C 9 0 9
8  Ligand   BASEPLATE STRUCTURAL PROTEIN GP8  D 6 0 6
9 Water     1025 0 1025
total       2367 10140 1439

Proteins
Unit 1 ILE7 TYR8 ARG9 ALA10 ILE11 VAL12 THR13 SER14 LYS15 PHE16 ARG17 THR18 GLU19 LYS20 MSE21 LEU22 ASN23 PHE24 TYR25 ASN26 SER27 ILE28 GLY29 SER30 GLY31 PRO32 ASP33 LYS34 ASN35 THR36 ILE37 PHE38 ILE39 THR40 PHE41 GLY42 ARG43 SER44 GLU45 PRO46 TRP47 SER48 SER49 ASN50 GLU51 ASN52 GLU53 VAL54 GLY55 PHE56 ALA57 PRO58 PRO59 TYR60 PRO61 THR62 ASP63 SER64 VAL65 LEU66 GLY67 VAL68 THR69 ASP70 MSE71 TRP72 THR73 HIS74 MSE75 MSE76 GLY77 THR78 VAL79 LYS80 VAL81 LEU82 PRO83 SER84 MSE85 LEU86 ASP87 ALA88 VAL89 ILE90 PRO91 ARG92 ARG93 ASP94 TRP95 GLY96 ASP97 THR98 ARG99 TYR100 PRO101 ASP102 PRO103 TYR104 THR105 PHE106 ARG107 ILE108 ASN109 ASP110 ILE111 VAL112 VAL113 CYS114 ASN115 SER116 ALA117 PRO118 TYR119 ASN120 ALA121 THR122 GLU123 SER124 GLY125 ALA126 GLY127 TRP128 LEU129 VAL130 TYR131 ARG132 CYS133 LEU134 ASP135 VAL136 PRO137 ASP138 THR139 GLY140 MSE141 CYS142 SER143 ILE144 ALA145 SER146 LEU147 THR148 ASP149 LYS150 ASP151 GLU152 CYS153 LEU154 LYS155 LEU156 GLY157 GLY158 LYS159 TRP160 THR161 PRO162 SER163 ALA164 ARG165 SER166 MSE167 THR168 PRO169 PRO170 GLU171 GLY172 ARG173 GLY174 ASP175 ALA176 GLU177 GLY178 THR179 ILE180 GLU181 PRO182 GLY183 ASP184 GLY185 TYR186 VAL187 TRP188 GLU189 TYR190 LEU191 PHE192 GLU193 ILE194 PRO195 PRO196 ASP197 VAL198 SER199 ILE200 ASN201 ARG202 CYS203 THR204 ASN205 GLU206 TYR207 ILE208 VAL209 VAL210 PRO211 TRP212 PRO213 GLU214 GLU215 LEU216 LYS217 GLU218 ASP219 PRO220 THR221 ARG222 TRP223 GLY224 TYR225 GLU226 ASP227 ASN228 LEU229 THR230 TRP231 GLN232 GLN233 ASP234 ASP235 PHE236 GLY237 LEU238 ILE239 TYR240 ARG241 VAL242 LYS243 ALA244 ASN245 THR246 ILE247 ARG248 PHE249 LYS250 ALA251 TYR252 LEU253 ASP254 SER255 VAL256 TYR257 PHE258 PRO259 GLU260 ALA261 ALA262 LEU263 PRO264 GLY265 ASN266 LYS267 GLY268 PHE269 ARG270 GLN271 ILE272 SER273 ILE274 ILE275 THR276 ASN277 PRO278 LEU279 GLU280 ALA281 LYS282 ALA283 HIS284 PRO285 ASN286 ASP287 PRO288 ASN289 VAL290 LYS291 ALA292 GLU293 LYS294 ASP295 TYR296 TYR297 ASP298 PRO299 GLU300 ASP301 LEU302 MSE303 ARG304 HIS305 SER306 GLY307 GLU308 MSE309 ILE310 TYR311 MSE312 GLU313 ASN314 ARG315 PRO316 PRO317 ILE318 ILE319 MSE320 ALA321 MSE322 ASP323 GLN324 THR325 GLU326 GLU327 ILE328 ASN329 ILE330 LEU331 PHE332 THR333 PHE334
Unit 2 ILE7 TYR8 ARG9 ALA10 ILE11 VAL12 THR13 SER14 LYS15 PHE16 ARG17 THR18 GLU19 LYS20 MSE21 LEU22 ASN23 PHE24 TYR25 ASN26 SER27 ILE28 GLY29 SER30 GLY31 PRO32 ASP33 LYS34 ASN35 THR36 ILE37 PHE38 ILE39 THR40 PHE41 GLY42 ARG43 SER44 GLU45 PRO46 TRP47 SER48 SER49 ASN50 GLU51 ASN52 GLU53 VAL54 GLY55 PHE56 ALA57 PRO58 PRO59 TYR60 PRO61 THR62 ASP63 SER64 VAL65 LEU66 GLY67 VAL68 THR69 ASP70 MSE71 TRP72 THR73 HIS74 MSE75 MSE76 GLY77 THR78 VAL79 LYS80 VAL81 LEU82 PRO83 SER84 MSE85 LEU86 ASP87 ALA88 VAL89 ILE90 PRO91 ARG92 ARG93 ASP94 TRP95 GLY96 ASP97 THR98 ARG99 TYR100 PRO101 ASP102 PRO103 TYR104 THR105 PHE106 ARG107 ILE108 ASN109 ASP110 ILE111 VAL112 VAL113 CYS114 ASN115 SER116 ALA117 PRO118 TYR119 ASN120 ALA121 THR122 GLU123 SER124 GLY125 ALA126 GLY127 TRP128 LEU129 VAL130 TYR131 ARG132 CYS133 LEU134 ASP135 VAL136 PRO137 ASP138 THR139 GLY140 MSE141 CYS142 SER143 ILE144 ALA145 SER146 LEU147 THR148 ASP149 LYS150 ASP151 GLU152 CYS153 LEU154 LYS155 LEU156 GLY157 GLY158 LYS159 TRP160 THR161 PRO162 SER163 ALA164 ARG165 SER166 MSE167 THR168 PRO169 PRO170 GLU171 GLY172 ARG173 GLY174 ASP175 ALA176 GLU177 GLY178 THR179 ILE180 GLU181 PRO182 GLY183 ASP184 GLY185 TYR186 VAL187 TRP188 GLU189 TYR190 LEU191 PHE192 GLU193 ILE194 PRO195 PRO196 ASP197 VAL198 SER199 ILE200 ASN201 ARG202 CYS203 THR204 ASN205 GLU206 TYR207 ILE208 VAL209 VAL210 PRO211 TRP212 PRO213 GLU214 GLU215 LEU216 LYS217 GLU218 ASP219 PRO220 THR221 ARG222 TRP223 GLY224 TYR225 GLU226 ASP227 ASN228 LEU229 THR230 TRP231 GLN232 GLN233 ASP234 ASP235 PHE236 GLY237 LEU238 ILE239 TYR240 ARG241 VAL242 LYS243 ALA244 ASN245 THR246 ILE247 ARG248 PHE249 LYS250 ALA251 TYR252 LEU253 ASP254 SER255 VAL256 TYR257 PHE258 PRO259 GLU260 ALA261 ALA262 LEU263 PRO264 GLY265 ASN266 LYS267 GLY268 PHE269 ARG270 GLN271 ILE272 SER273 ILE274 ILE275 THR276 ASN277 PRO278 LEU279 GLU280 ALA281 LYS282 ALA283 HIS284 PRO285 ASN286 ASP287 PRO288 ASN289 VAL290 LYS291 ALA292 GLU293 LYS294 ASP295 TYR296 TYR297 ASP298 PRO299 GLU300 ASP301 LEU302 MSE303 ARG304 HIS305 SER306 GLY307 GLU308 MSE309 ILE310 TYR311 MSE312 GLU313 ASN314 ARG315 PRO316 PRO317 ILE318 ILE319 MSE320 ALA321 MSE322 ASP323 GLN324 THR325 GLU326 GLU327 ILE328 ASN329 ILE330 LEU331 PHE332 THR333 PHE334
Unit 3 ILE7 TYR8 ARG9 ALA10 ILE11 VAL12 THR13 SER14 LYS15 PHE16 ARG17 THR18 GLU19 LYS20 MSE21 LEU22 ASN23 PHE24 TYR25 ASN26 SER27 ILE28 GLY29 SER30 GLY31 PRO32 ASP33 LYS34 ASN35 THR36 ILE37 PHE38 ILE39 THR40 PHE41 GLY42 ARG43 SER44 GLU45 PRO46 TRP47 SER48 SER49 ASN50 GLU51 ASN52 GLU53 VAL54 GLY55 PHE56 ALA57 PRO58 PRO59 TYR60 PRO61 THR62 ASP63 SER64 VAL65 LEU66 GLY67 VAL68 THR69 ASP70 MSE71 TRP72 THR73 HIS74 MSE75 MSE76 GLY77 THR78 VAL79 LYS80 VAL81 LEU82 PRO83 SER84 MSE85 LEU86 ASP87 ALA88 VAL89 ILE90 PRO91 ARG92 ARG93 ASP94 TRP95 GLY96 ASP97 THR98 ARG99 TYR100 PRO101 ASP102 PRO103 TYR104 THR105 PHE106 ARG107 ILE108 ASN109 ASP110 ILE111 VAL112 VAL113 CYS114 ASN115 SER116 ALA117 PRO118 TYR119 ASN120 ALA121 THR122 GLU123 SER124 GLY125 ALA126 GLY127 TRP128 LEU129 VAL130 TYR131 ARG132 CYS133 LEU134 ASP135 VAL136 PRO137 ASP138 THR139 GLY140 MSE141 CYS142 SER143 ILE144 ALA145 SER146 LEU147 THR148 ASP149 LYS150 ASP151 GLU152 CYS153 LEU154 LYS155 LEU156 GLY157 GLY158 LYS159 TRP160 THR161 PRO162 SER163 ALA164 ARG165 SER166 MSE167 THR168 PRO169 PRO170 GLU171 GLY172 ARG173 GLY174 ASP175 ALA176 GLU177 GLY178 THR179 ILE180 GLU181 PRO182 GLY183 ASP184 GLY185 TYR186 VAL187 TRP188 GLU189 TYR190 LEU191 PHE192 GLU193 ILE194 PRO195 PRO196 ASP197 VAL198 SER199 ILE200 ASN201 ARG202 CYS203 THR204 ASN205 GLU206 TYR207 ILE208 VAL209 VAL210 PRO211 TRP212 PRO213 GLU214 GLU215 LEU216 LYS217 GLU218 ASP219 PRO220 THR221 ARG222 TRP223 GLY224 TYR225 GLU226 ASP227 ASN228 LEU229 THR230 TRP231 GLN232 GLN233 ASP234 ASP235 PHE236 GLY237 LEU238 ILE239 TYR240 ARG241 VAL242 LYS243 ALA244 ASN245 THR246 ILE247 ARG248 PHE249 LYS250 ALA251 TYR252 LEU253 ASP254 SER255 VAL256 TYR257 PHE258 PRO259 GLU260 ALA261 ALA262 LEU263 PRO264 GLY265 ASN266 LYS267 GLY268 PHE269 ARG270 GLN271 ILE272 SER273 ILE274 ILE275 THR276 ASN277 PRO278 LEU279 GLU280 ALA281 LYS282 ALA283 HIS284 PRO285 ASN286 ASP287 PRO288 ASN289 VAL290 LYS291 ALA292 GLU293 LYS294 ASP295 TYR296 TYR297 ASP298 PRO299 GLU300 ASP301 LEU302 MSE303 ARG304 HIS305 SER306 GLY307 GLU308 MSE309 ILE310 TYR311 MSE312 GLU313 ASN314 ARG315 PRO316 PRO317 ILE318 ILE319 MSE320 ALA321 MSE322 ASP323 GLN324 THR325 GLU326 GLU327 ILE328 ASN329 ILE330 LEU331 PHE332 THR333 PHE334
Unit 4 ILE7 TYR8 ARG9 ALA10 ILE11 VAL12 THR13 SER14 LYS15 PHE16 ARG17 THR18 GLU19 LYS20 MSE21 LEU22 ASN23 PHE24 TYR25 ASN26 SER27 ILE28 GLY29 SER30 GLY31 PRO32 ASP33 LYS34 ASN35 THR36 ILE37 PHE38 ILE39 THR40 PHE41 GLY42 ARG43 SER44 GLU45 PRO46 TRP47 SER48 SER49 ASN50 GLU51 ASN52 GLU53 VAL54 GLY55 PHE56 ALA57 PRO58 PRO59 TYR60 PRO61 THR62 ASP63 SER64 VAL65 LEU66 GLY67 VAL68 THR69 ASP70 MSE71 TRP72 THR73 HIS74 MSE75 MSE76 GLY77 THR78 VAL79 LYS80 VAL81 LEU82 PRO83 SER84 MSE85 LEU86 ASP87 ALA88 VAL89 ILE90 PRO91 ARG92 ARG93 ASP94 TRP95 GLY96 ASP97 THR98 ARG99 TYR100 PRO101 ASP102 PRO103 TYR104 THR105 PHE106 ARG107 ILE108 ASN109 ASP110 ILE111 VAL112 VAL113 CYS114 ASN115 SER116 ALA117 PRO118 TYR119 ASN120 ALA121 THR122 GLU123 SER124 GLY125 ALA126 GLY127 TRP128 LEU129 VAL130 TYR131 ARG132 CYS133 LEU134 ASP135 VAL136 PRO137 ASP138 THR139 GLY140 MSE141 CYS142 SER143 ILE144 ALA145 SER146 LEU147 THR148 ASP149 LYS150 ASP151 GLU152 CYS153 LEU154 LYS155 LEU156 GLY157 GLY158 LYS159 TRP160 THR161 PRO162 SER163 ALA164 ARG165 SER166 MSE167 THR168 PRO169 PRO170 GLU171 GLY172 ARG173 GLY174 ASP175 ALA176 GLU177 GLY178 THR179 ILE180 GLU181 PRO182 GLY183 ASP184 GLY185 TYR186 VAL187 TRP188 GLU189 TYR190 LEU191 PHE192 GLU193 ILE194 PRO195 PRO196 ASP197 VAL198 SER199 ILE200 ASN201 ARG202 CYS203 THR204 ASN205 GLU206 TYR207 ILE208 VAL209 VAL210 PRO211 TRP212 PRO213 GLU214 GLU215 LEU216 LYS217 GLU218 ASP219 PRO220 THR221 ARG222 TRP223 GLY224 TYR225 GLU226 ASP227 ASN228 LEU229 THR230 TRP231 GLN232 GLN233 ASP234 ASP235 PHE236 GLY237 LEU238 ILE239 TYR240 ARG241 VAL242 LYS243 ALA244 ASN245 THR246 ILE247 ARG248 PHE249 LYS250 ALA251 TYR252 LEU253 ASP254 SER255 VAL256 TYR257 PHE258 PRO259 GLU260 ALA261 ALA262 LEU263 PRO264 GLY265 ASN266 LYS267 GLY268 PHE269 ARG270 GLN271 ILE272 SER273 ILE274 ILE275 THR276 ASN277 PRO278 LEU279 GLU280 ALA281 LYS282 ALA283 HIS284 PRO285 ASN286 ASP287 PRO288 ASN289 VAL290 LYS291 ALA292 GLU293 LYS294 ASP295 TYR296 TYR297 ASP298 PRO299 GLU300 ASP301 LEU302 MSE303 ARG304 HIS305 SER306 GLY307 GLU308 MSE309 ILE310 TYR311 MSE312 GLU313 ASN314 ARG315 PRO316 PRO317 ILE318 ILE319 MSE320 ALA321 MSE322 ASP323 GLN324 THR325 GLU326 GLU327 ILE328 ASN329 ILE330 LEU331 PHE332 THR333 PHE334

Ligands
Unit 5 CL1701 CL1702 CL1703 CL1704 CL1705 CL1706 CL1707 CL1708 CL1729
Unit 6 CL1709 CL1710 CL1711 CL1712 CL1713 CL1714
Unit 7 CL1715 CL1716 CL1717 CL1718 CL1719 CL1720 CL1721 CL1722 CL1730
Unit 8 CL1723 CL1724 CL1725 CL1726 CL1727 CL1728

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany