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Sequence, Chains, Asymmetric and Biological Units

Title RECEPTOR-BINDING DOMAIN FROM SUBGROUP B FELINE LEUKEMIA VIRU
Keywords ANTIPARALLEL BETA-SANDWICH GLYCOPROTEIN, VIRAL PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FELINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN  A 205 1601 0
2  Protein   FELINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN  B 205 1601 0
3  Ligand    C 2 0 28
4  Ligand    D 2 0 28
5  Ligand    E 2 0 28
6  Ligand    F 5 0 64
7  Ligand   FELINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN  A 1 0 11
8 Water     178 0 178
total       600 3202 337

Proteins
Unit 1 PRO4 HIS5 GLN6 VAL7 TYR8 ASN9 VAL10 THR11 TRP12 THR13 ILE14 THR15 ASN16 LEU17 VAL18 THR19 GLY20 THR21 LYS22 ALA23 ASN24 ALA25 THR26 SER27 MET28 LEU29 GLY30 THR31 LEU32 THR33 ASP34 ALA35 PHE36 PRO37 THR38 MET39 TYR40 PHE41 ASP42 LEU43 CYS44 ASP45 ILE46 ILE47 GLY48 ASN49 THR50 TRP51 ASN52 PRO53 SER54 ASP55 GLN56 GLU57 PRO58 PHE59 PRO60 GLY61 TYR62 GLY63 CYS64 ASP65 GLN66 PRO67 MET68 ARG69 ARG70 TRP71 GLN72 GLN73 ARG74 ASN75 THR76 PRO77 PHE78 TYR79 VAL80 CYS81 PRO82 GLY83 HIS84 ALA85 ASN86 ARG87 LYS88 GLN89 CYS90 GLY91 GLY92 PRO93 GLN94 ASP95 GLY96 PHE97 CYS98 ALA99 VAL100 TRP101 GLY102 CYS103 GLU104 THR105 THR106 GLY107 GLU108 THR109 TYR110 TRP111 ARG112 PRO113 THR114 SER115 SER116 TRP117 ASP118 TYR119 ILE120 THR121 VAL122 LYS123 LYS124 GLY125 VAL126 THR127 GLN128 GLY129 ILE130 TYR131 GLN132 CYS133 SER134 GLY135 GLY136 GLY137 TRP138 CYS139 GLY140 PRO141 CYS142 TYR143 ASP144 LYS145 ALA146 VAL147 HIS148 SER149 SER150 THR151 THR152 GLY153 ALA154 SER155 GLU156 GLY157 GLY158 ARG159 CYS160 ASN161 PRO162 LEU163 ILE164 LEU165 GLN166 PHE167 THR168 GLN169 LYS170 GLY171 ARG172 GLN173 THR174 SER175 TRP176 ASP177 GLY178 PRO179 LYS180 SER181 TRP182 GLY183 LEU184 ARG185 LEU186 TYR187 ARG188 SER189 GLY190 TYR191 ASP192 PRO193 ILE194 ALA195 LEU196 PHE197 SER198 VAL199 SER200 ARG201 GLN202 VAL203 MET204 THR205 ILE206 THR207 PRO208
Unit 2 PRO4 HIS5 GLN6 VAL7 TYR8 ASN9 VAL10 THR11 TRP12 THR13 ILE14 THR15 ASN16 LEU17 VAL18 THR19 GLY20 THR21 LYS22 ALA23 ASN24 ALA25 THR26 SER27 MET28 LEU29 GLY30 THR31 LEU32 THR33 ASP34 ALA35 PHE36 PRO37 THR38 MET39 TYR40 PHE41 ASP42 LEU43 CYS44 ASP45 ILE46 ILE47 GLY48 ASN49 THR50 TRP51 ASN52 PRO53 SER54 ASP55 GLN56 GLU57 PRO58 PHE59 PRO60 GLY61 TYR62 GLY63 CYS64 ASP65 GLN66 PRO67 MET68 ARG69 ARG70 TRP71 GLN72 GLN73 ARG74 ASN75 THR76 PRO77 PHE78 TYR79 VAL80 CYS81 PRO82 GLY83 HIS84 ALA85 ASN86 ARG87 LYS88 GLN89 CYS90 GLY91 GLY92 PRO93 GLN94 ASP95 GLY96 PHE97 CYS98 ALA99 VAL100 TRP101 GLY102 CYS103 GLU104 THR105 THR106 GLY107 GLU108 THR109 TYR110 TRP111 ARG112 PRO113 THR114 SER115 SER116 TRP117 ASP118 TYR119 ILE120 THR121 VAL122 LYS123 LYS124 GLY125 VAL126 THR127 GLN128 GLY129 ILE130 TYR131 GLN132 CYS133 SER134 GLY135 GLY136 GLY137 TRP138 CYS139 GLY140 PRO141 CYS142 TYR143 ASP144 LYS145 ALA146 VAL147 HIS148 SER149 SER150 THR151 THR152 GLY153 ALA154 SER155 GLU156 GLY157 GLY158 ARG159 CYS160 ASN161 PRO162 LEU163 ILE164 LEU165 GLN166 PHE167 THR168 GLN169 LYS170 GLY171 ARG172 GLN173 THR174 SER175 TRP176 ASP177 GLY178 PRO179 LYS180 SER181 TRP182 GLY183 LEU184 ARG185 LEU186 TYR187 ARG188 SER189 GLY190 TYR191 ASP192 PRO193 ILE194 ALA195 LEU196 PHE197 SER198 VAL199 SER200 ARG201 GLN202 VAL203 MET204 THR205 ILE206 THR207 PRO208

Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2 MAN3 BMA4 NDG5
Unit 7 TOE219

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany