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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A BACTERIAL SIGNAL PEPTIDASE APO-ENZYME IMPLICATIONS FOR SIGNAL PEPTIDE BINDING AND THE SER-LYS DYA MECHANISM.
Keywords SERINE PROTEASE, LYSINE GENERAL BASE, MEMBRANE PROTEIN, MOST FOLD, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1KN9     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SIGNAL PEPTIDASE I  A 234 1782 0
2  Protein   SIGNAL PEPTIDASE I  B 222 1688 0
3  Protein   SIGNAL PEPTIDASE I  C 234 1805 0
4  Protein   SIGNAL PEPTIDASE I  D 214 1623 0
5 Water     256 0 256
total       1160 6898 256
Proteins
Unit 1 VAL76 ARG77 SER78 PHE79 ILE80 TYR81 GLU82 PRO83 PHE84 GLN85 ILE86 PRO87 SER88 GLY89 SER90 MET91 MET92 PRO93 THR94 LEU95 LEU96 ILE97 GLY98 ASP99 PHE100 ILE101 LEU102 VAL103 GLU104 LYS105 PHE106 ALA107 TYR108 GLY109 ILE110 LYS111 ASP112 PRO113 ILE114 TYR115 GLN116 LYS117 THR118 LEU119 ILE120 GLU121 THR122 GLY123 HIS124 PRO125 LYS126 ARG127 GLY128 ASP129 ILE130 VAL131 VAL132 PHE133 LYS134 TYR135 PRO136 GLU137 ASP138 PRO139 LYS140 LEU141 ASP142 TYR143 ILE144 LYS145 ARG146 ALA147 VAL148 GLY149 LEU150 PRO151 GLY152 ASP153 LYS154 VAL155 THR156 TYR157 ASP158 PRO159 VAL160 SER161 LYS162 GLU163 LEU164 THR165 ILE166 GLN167 PRO168 GLY169 CYS170 SER171 SER172 ASN178 ALA179 LEU180 PRO181 VAL182 THR183 TYR184 SER185 ASN186 VAL187 GLU188 PRO189 SER190 ASP191 PHE192 VAL193 GLN194 THR195 PHE196 SER197 ARG198 ARG199 ASN200 GLY201 GLY202 GLU203 ALA204 THR205 SER206 GLY207 PHE208 PHE209 GLU210 VAL211 PRO212 LYS213 ASN214 GLU215 THR216 LYS217 GLU218 ASN219 GLY220 ILE221 ARG222 LEU223 SER224 GLU225 ARG226 LYS227 GLU228 THR229 LEU230 GLY231 ASP232 VAL233 THR234 HIS235 ARG236 ILE237 LEU238 THR239 VAL240 PRO241 ILE242 ALA243 GLN244 ASP245 GLN246 VAL247 GLY248 MET249 TYR250 TYR251 GLN252 GLN253 PRO254 GLY255 GLN256 GLN257 LEU258 ALA259 THR260 TRP261 ILE262 VAL263 PRO264 PRO265 GLY266 GLN267 TYR268 PHE269 MET270 MET271 GLY272 ASP273 ASN274 ARG275 ASP276 ASN277 SER278 ALA279 ASP280 SER281 ARG282 TYR283 TRP284 GLY285 PHE286 VAL287 PRO288 GLU289 ALA290 ASN291 LEU292 VAL293 GLY294 ARG295 ALA296 THR297 ALA298 ILE299 TRP300 MET301 SER302 PHE303 ASP304 LEU314 ARG315 LEU316 SER317 ARG318 ILE319 GLY320 GLY321 ILE322 HIS323
Unit 2 SER78 PHE79 ILE80 TYR81 GLU82 PRO83 PHE84 GLN85 ILE86 PRO87 SER88 GLY89 SER90 MET91 MET92 PRO93 THR94 LEU95 LEU96 ILE97 GLY98 ASP99 PHE100 ILE101 LEU102 VAL103 GLU104 LYS105 PHE106 ALA107 HIS124 PRO125 LYS126 ARG127 GLY128 ASP129 ILE130 VAL131 VAL132 PHE133 LYS134 TYR135 PRO136 GLU137 ASP138 PRO139 LYS140 LEU141 ASP142 TYR143 ILE144 LYS145 ARG146 ALA147 VAL148 GLY149 LEU150 PRO151 GLY152 ASP153 LYS154 VAL155 THR156 TYR157 ASP158 PRO159 VAL160 SER161 LYS162 GLU163 LEU164 THR165 ILE166 GLN167 PRO168 GLY169 CYS170 SER171 SER172 GLY173 GLN174 ALA175 CYS176 GLU177 ASN178 ALA179 LEU180 PRO181 VAL182 THR183 TYR184 SER185 ASN186 VAL187 GLU188 PRO189 SER190 ASP191 PHE192 VAL193 GLN194 THR195 PHE196 SER197 ARG198 ARG199 ASN200 GLY201 GLY202 GLU203 ALA204 THR205 SER206 GLY207 PHE208 PHE209 GLU210 VAL211 PRO212 LYS213 ASN214 GLU215 THR216 LYS217 GLU218 ASN219 GLY220 ILE221 ARG222 LEU223 SER224 GLU225 ARG226 LYS227 GLU228 THR229 LEU230 GLY231 ASP232 VAL233 THR234 HIS235 ARG236 ILE237 LEU238 THR239 VAL240 PRO241 ILE242 ALA243 GLN244 ASP245 GLN246 VAL247 GLY248 MET249 TYR250 TYR251 GLN252 GLN253 PRO254 GLY255 GLN256 GLN257 LEU258 ALA259 THR260 TRP261 ILE262 VAL263 PRO264 PRO265 GLY266 GLN267 TYR268 PHE269 MET270 MET271 GLY272 ASP273 ASN274 ARG275 ASP276 ASN277 SER278 ALA279 ASP280 SER281 ARG282 TYR283 TRP284 GLY285 PHE286 VAL287 PRO288 GLU289 ALA290 ASN291 LEU292 VAL293 GLY294 ARG295 ALA296 THR297 ALA298 ILE299 TRP300 MET301 SER302 PHE303 ASP304 GLY313 LEU314 ARG315 LEU316 SER317 ARG318 ILE319 GLY320 GLY321 ILE322 HIS323
Unit 3 VAL76 ARG77 SER78 PHE79 ILE80 TYR81 GLU82 PRO83 PHE84 GLN85 ILE86 PRO87 SER88 GLY89 SER90 MET91 MET92 PRO93 THR94 LEU95 LEU96 ILE97 GLY98 ASP99 PHE100 ILE101 LEU102 VAL103 GLU104 LYS105 PHE106 ALA107 TYR108 GLY109 ILE110 LYS111 ASP112 PRO113 ILE114 TYR115 GLN116 LYS117 THR118 LEU119 ILE120 GLU121 THR122 GLY123 HIS124 PRO125 LYS126 ARG127 GLY128 ASP129 ILE130 VAL131 VAL132 PHE133 LYS134 TYR135 PRO136 GLU137 ASP138 PRO139 LYS140 LEU141 ASP142 TYR143 ILE144 LYS145 ARG146 ALA147 VAL148 GLY149 LEU150 PRO151 GLY152 ASP153 LYS154 VAL155 THR156 TYR157 ASP158 PRO159 VAL160 SER161 LYS162 GLU163 LEU164 THR165 ILE166 GLN167 PRO168 GLY169 CYS170 SER171 SER172 ASN178 ALA179 LEU180 PRO181 VAL182 THR183 TYR184 SER185 ASN186 VAL187 GLU188 PRO189 SER190 ASP191 PHE192 VAL193 GLN194 THR195 PHE196 SER197 ARG198 ARG199 ASN200 GLY201 GLY202 GLU203 ALA204 THR205 SER206 GLY207 PHE208 PHE209 GLU210 VAL211 PRO212 LYS213 ASN214 GLU215 THR216 LYS217 GLU218 ASN219 GLY220 ILE221 ARG222 LEU223 SER224 GLU225 ARG226 LYS227 GLU228 THR229 LEU230 GLY231 ASP232 VAL233 THR234 HIS235 ARG236 ILE237 LEU238 THR239 VAL240 PRO241 ILE242 ALA243 GLN244 ASP245 GLN246 VAL247 GLY248 MET249 TYR250 TYR251 GLN252 GLN253 PRO254 GLY255 GLN256 GLN257 LEU258 ALA259 THR260 TRP261 ILE262 VAL263 PRO264 PRO265 GLY266 GLN267 TYR268 PHE269 MET270 MET271 GLY272 ASP273 ASN274 ARG275 ASP276 ASN277 SER278 ALA279 ASP280 SER281 ARG282 TYR283 TRP284 GLY285 PHE286 VAL287 PRO288 GLU289 ALA290 ASN291 LEU292 VAL293 GLY294 ARG295 ALA296 THR297 ALA298 ILE299 TRP300 MET301 SER302 PHE303 ASP304 LEU314 ARG315 LEU316 SER317 ARG318 ILE319 GLY320 GLY321 ILE322 HIS323
Unit 4 SER78 PHE79 ILE80 TYR81 GLU82 PRO83 PHE84 GLN85 ILE86 PRO87 SER88 GLY89 SER90 MET91 MET92 PRO93 THR94 LEU95 LEU96 ILE97 GLY98 ASP99 PHE100 ILE101 LEU102 VAL103 GLU104 LYS105 PHE106 PRO125 LYS126 ARG127 GLY128 ASP129 ILE130 VAL131 VAL132 PHE133 LYS134 TYR135 GLU137 ASP138 PRO139 LYS140 LEU141 ASP142 TYR143 ILE144 LYS145 ARG146 ALA147 VAL148 GLY149 LEU150 PRO151 GLY152 ASP153 LYS154 VAL155 THR156 TYR157 ASP158 PRO159 VAL160 SER161 LYS162 GLU163 LEU164 THR165 ILE166 GLN167 PRO168 GLY169 CYS170 SER171 SER172 GLY173 GLN174 ALA175 ASN178 ALA179 LEU180 PRO181 VAL182 THR183 TYR184 SER185 ASN186 VAL187 GLU188 PRO189 SER190 ASP191 PHE192 VAL193 GLN194 THR195 PHE196 SER197 ARG198 ARG199 GLU203 ALA204 THR205 SER206 GLY207 PHE208 PHE209 GLU210 VAL211 PRO212 LYS213 ASN214 GLU215 THR216 LYS217 GLU218 ASN219 GLY220 ILE221 ARG222 LEU223 SER224 GLU225 ARG226 LYS227 GLU228 THR229 LEU230 GLY231 ASP232 VAL233 THR234 HIS235 ARG236 ILE237 LEU238 THR239 VAL240 PRO241 ILE242 ALA243 GLN244 ASP245 GLN246 VAL247 GLY248 MET249 TYR250 TYR251 GLN252 GLN253 PRO254 GLY255 GLN256 GLN257 LEU258 ALA259 THR260 TRP261 ILE262 VAL263 PRO264 PRO265 GLY266 GLN267 TYR268 PHE269 MET270 MET271 GLY272 ASP273 ASN274 ARG275 ASP276 ASN277 SER278 ALA279 ASP280 SER281 ARG282 TYR283 TRP284 GLY285 PHE286 VAL287 PRO288 GLU289 ALA290 ASN291 LEU292 VAL293 GLY294 ARG295 ALA296 THR297 ALA298 ILE299 TRP300 MET301 SER302 PHE303 ASP304 GLY313 LEU314 ARG315 LEU316 SER317 ARG318 ILE319 GLY320 GLY321 ILE322 HIS323
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany