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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE 46KDA DOMAIN OF HUMAN CARDIAC TROPONIN IN THE CA2+ SATURATED FORM
Keywords THIN FILAMENT, MUSCLE REGULATION, CA2+ BINDING PROTEIN, EF- HAND, COILED-COIL, CONTRACTILE PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1J1D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TROPONIN C  A 159 1269 0
2  Protein   TROPONIN T  B 70 611 0
3  Protein   TROPONIN I  C 118 942 0
4  Protein   TROPONIN C  D 160 1274 0
5  Protein   TROPONIN T  E 75 656 0
6  Protein   TROPONIN I  F 116 917 0
7  Ligand   TROPONIN C  A 3 0 3
8  Ligand   TROPONIN C  D 3 0 3
9 Water     102 0 102
total       806 5669 108

Proteins
Unit 1 MET1 ASP2 ASP3 ILE4 TYR5 LYS6 ALA7 ALA8 VAL9 GLU10 GLN11 LEU12 THR13 GLU14 GLU15 GLN16 LYS17 ASN18 GLU19 PHE20 LYS21 ALA22 ALA23 PHE24 ASP25 ILE26 PHE27 VAL28 LEU29 GLY30 ALA31 GLU32 ASP33 GLY34 SER35 ILE36 SER37 THR38 LYS39 GLU40 LEU41 GLY42 LYS43 VAL44 MET45 ARG46 MET47 LEU48 GLY49 GLN50 ASN51 PRO52 THR53 PRO54 GLU55 GLU56 LEU57 GLN58 GLU59 MET60 ILE61 ASP62 GLU63 VAL64 ASP65 GLU66 ASP67 GLY68 SER69 GLY70 THR71 VAL72 ASP73 PHE74 ASP75 GLU76 PHE77 LEU78 VAL79 MET80 MET81 VAL82 ARG83 SER84 MET85 LYS86 ASP87 ASP88 SER89 LYS92 SER93 GLU94 GLU95 GLU96 LEU97 SER98 ASP99 LEU100 PHE101 ARG102 MET103 PHE104 ASP105 LYS106 ASN107 ALA108 ASP109 GLY110 TYR111 ILE112 ASP113 LEU114 GLU115 GLU116 LEU117 LYS118 ILE119 MET120 LEU121 GLN122 ALA123 THR124 GLY125 GLU126 THR127 ILE128 THR129 GLU130 ASP131 ASP132 ILE133 GLU134 GLU135 LEU136 MET137 LYS138 ASP139 GLY140 ASP141 LYS142 ASN143 ASN144 ASP145 GLY146 ARG147 ILE148 ASP149 TYR150 ASP151 GLU152 PHE153 LEU154 GLU155 PHE156 MET157 LYS158 GLY159 VAL160 GLU161
Unit 2 GLN202 THR203 GLU204 ARG205 GLU206 LYS207 LYS208 LYS209 LYS210 ILE211 LEU212 ALA213 GLU214 ARG215 ARG216 LYS217 VAL218 LEU219 ALA220 ILE221 ASP222 HIS223 LEU224 ASN225 GLU226 ASP227 GLN228 LEU229 ARG230 GLU231 LYS232 ALA233 LYS234 GLU235 LEU236 TRP237 GLN238 THR239 ILE240 TYR241 ASN242 LEU243 GLU244 ALA245 GLU246 LYS247 PHE248 ASP249 LEU250 GLN251 GLU252 LYS253 PHE254 LYS255 GLN256 GLN257 LYS258 TYR259 GLU260 ILE261 ASN262 VAL263 LEU264 ARG265 ASN266 ARG267 ILE268 ASN269 ASP270 ASN271
Unit 3 ALA35 LYS36 LYS37 LYS38 SER39 LYS40 ILE41 SER42 ALA43 SER44 ARG45 LYS46 LEU47 GLN48 LEU49 LYS50 THR51 LEU52 LEU53 LEU54 GLN55 ILE56 ALA57 LYS58 GLN59 GLU60 LEU61 GLU62 ARG63 GLU64 ALA65 GLU66 GLU67 ARG68 ARG69 GLY70 GLU71 LYS72 GLY73 ARG74 ALA75 LEU76 SER77 THR78 ARG79 ALA80 GLN81 PRO82 LEU83 GLU84 LEU85 ALA86 GLY87 LEU88 GLY89 PHE90 ALA91 GLU92 LEU93 GLN94 ASP95 LEU96 ALA97 ARG98 GLN99 LEU100 HIS101 ALA102 ARG103 VAL104 ASP105 LYS106 VAL107 ASP108 GLU109 GLU110 ARG111 TYR112 ASP113 ILE114 GLU115 ALA116 LYS117 VAL118 THR119 LYS120 ASN121 ILE122 THR123 GLU124 ILE125 ALA126 ASP127 LEU128 THR129 GLN130 LYS131 ILE132 PHE133 ASP134 LEU135 ARG136 ARG145 ARG146 VAL147 ARG148 ILE149 SER150 ALA151 ASP152 ALA153 MET154 MET155 GLN156 ALA157 LEU158 LEU159 GLY160
Unit 4 ASP2 ASP3 ILE4 TYR5 LYS6 ALA7 ALA8 VAL9 GLU10 GLN11 LEU12 THR13 GLU14 GLU15 GLN16 LYS17 ASN18 GLU19 PHE20 LYS21 ALA22 ALA23 PHE24 ASP25 ILE26 PHE27 VAL28 LEU29 GLY30 ALA31 GLU32 ASP33 GLY34 SER35 ILE36 SER37 THR38 LYS39 GLU40 LEU41 GLY42 LYS43 VAL44 MET45 ARG46 MET47 LEU48 GLY49 GLN50 ASN51 PRO52 THR53 PRO54 GLU55 GLU56 LEU57 GLN58 GLU59 MET60 ILE61 ASP62 GLU63 VAL64 ASP65 GLU66 ASP67 GLY68 SER69 GLY70 THR71 VAL72 ASP73 PHE74 ASP75 GLU76 PHE77 LEU78 VAL79 MET80 MET81 VAL82 ARG83 SER84 MET85 LYS86 ASP87 ASP88 SER89 LYS90 GLY91 LYS92 SER93 GLU94 GLU95 GLU96 LEU97 SER98 ASP99 LEU100 PHE101 ARG102 MET103 PHE104 ASP105 LYS106 ASN107 ALA108 ASP109 GLY110 TYR111 ILE112 ASP113 LEU114 GLU115 GLU116 LEU117 LYS118 ILE119 MET120 LEU121 GLN122 ALA123 THR124 GLY125 GLU126 THR127 ILE128 THR129 GLU130 ASP131 ASP132 ILE133 GLU134 GLU135 LEU136 MET137 LYS138 ASP139 GLY140 ASP141 LYS142 ASN143 ASN144 ASP145 GLY146 ARG147 ILE148 ASP149 TYR150 ASP151 GLU152 PHE153 LEU154 GLU155 PHE156 MET157 LYS158 GLY159 VAL160 GLU161
Unit 5 LYS200 ARG201 GLN202 THR203 GLU204 ARG205 GLU206 LYS207 LYS208 LYS209 LYS210 ILE211 LEU212 ALA213 GLU214 ARG215 ARG216 LYS217 VAL218 LEU219 ALA220 ILE221 ASP222 HIS223 LEU224 ASN225 GLU226 ASP227 GLN228 LEU229 ARG230 GLU231 LYS232 ALA233 LYS234 GLU235 LEU236 TRP237 GLN238 THR239 ILE240 TYR241 ASN242 LEU243 GLU244 ALA245 GLU246 LYS247 PHE248 ASP249 LEU250 GLN251 GLU252 LYS253 PHE254 LYS255 GLN256 GLN257 LYS258 TYR259 GLU260 ILE261 ASN262 VAL263 LEU264 ARG265 ASN266 ARG267 ILE268 ASN269 ASP270 ASN271 GLN272 LYS273 VAL274
Unit 6 LYS37 LYS38 SER39 LYS40 ILE41 SER42 ALA43 SER44 ARG45 LYS46 LEU47 GLN48 LEU49 LYS50 THR51 LEU52 LEU53 LEU54 GLN55 ILE56 ALA57 LYS58 GLN59 GLU60 LEU61 GLU62 ARG63 GLU64 ALA65 GLU66 GLU67 ARG68 ARG69 GLY70 GLU71 LYS72 GLY73 ARG74 ALA75 LEU76 SER77 THR78 ARG79 ALA80 GLN81 PRO82 LEU83 GLU84 LEU85 ALA86 GLY87 LEU88 GLY89 PHE90 ALA91 GLU92 LEU93 GLN94 ASP95 LEU96 ALA97 ARG98 GLN99 LEU100 HIS101 ALA102 ARG103 VAL104 ASP105 LYS106 VAL107 ASP108 GLU109 GLU110 ARG111 TYR112 ASP113 ILE114 GLU115 ALA116 LYS117 VAL118 THR119 LYS120 ASN121 ILE122 THR123 GLU124 ILE125 ALA126 ASP127 LEU128 THR129 GLN130 LYS131 ILE132 PHE133 ASP134 LEU135 ARG136 GLY137 LYS138 ILE149 SER150 ALA151 ASP152 ALA153 MET154 MET155 GLN156 ALA157 LEU158 LEU159 GLY160 ALA161 ARG162

Ligands
Unit 7 CA201 CA202 CA203
Unit 8 CA201 CA202 CA203

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany