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Sequence, Chains, Asymmetric and Biological Units

Title HISTOCOMPATIBILITY ANTIGEN
Keywords HISTOCOMPATIBILITY ANTIGEN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1IEA     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MHC CLASS II I-EK  A 182 1488 0
2  Protein   MHC CLASS II I-EK  B 214 1680 0
3  Protein   MHC CLASS II I-EK  C 182 1488 0
4  Protein   MHC CLASS II I-EK  D 214 1680 0
5  Ligand   MHC CLASS II I-EK  A 2 0 28
6  Ligand   MHC CLASS II I-EK  B 1 0 14
7  Ligand   MHC CLASS II I-EK  C 2 0 28
8  Ligand   MHC CLASS II I-EK  D 1 0 14
9 Water     349 0 349
total       1147 6336 433

Proteins
Unit 1 ILE1 LYS2 GLU3 GLU4 HIS5 THR6 ILE7 ILE8 GLN9 ALA10 GLU11 PHE12 TYR13 LEU14 LEU15 PRO16 ASP17 LYS18 ARG19 GLY20 GLU21 PHE22 MET23 PHE24 ASP25 PHE26 ASP27 GLY28 ASP29 GLU30 ILE31 PHE32 HIS33 VAL34 ASP35 ILE36 GLU37 LYS38 SER39 GLU40 THR41 ILE42 TRP43 ARG44 LEU45 GLU46 GLU47 PHE48 ALA49 LYS50 PHE51 ALA52 SER53 PHE54 GLU55 ALA56 GLN57 GLY58 ALA59 LEU60 ALA61 ASN62 ILE63 ALA64 VAL65 ASP66 LYS67 ALA68 ASN69 LEU70 ASP71 VAL72 MET73 LYS74 GLU75 ARG76 SER77 ASN78 ASN79 THR80 PRO81 ASP82 ALA83 ASN84 VAL85 ALA86 PRO87 GLU88 VAL89 THR90 VAL91 LEU92 SER93 ARG94 SER95 PRO96 VAL97 ASN98 LEU99 GLY100 GLU101 PRO102 ASN103 ILE104 LEU105 ILE106 CYS107 PHE108 ILE109 ASP110 LYS111 PHE112 SER113 PRO114 PRO115 VAL116 VAL117 ASN118 VAL119 THR120 TRP121 LEU122 ARG123 ASN124 GLY125 ARG126 PRO127 VAL128 THR129 GLU130 GLY131 VAL132 SER133 GLU134 THR135 VAL136 PHE137 LEU138 PRO139 ARG140 ASP141 ASP142 HIS143 LEU144 PHE145 ARG146 LYS147 PHE148 HIS149 TYR150 LEU151 THR152 PHE153 LEU154 PRO155 SER156 THR157 ASP158 ASP159 PHE160 TYR161 ASP162 CYS163 GLU164 VAL165 ASP166 HIS167 TRP168 GLY169 LEU170 GLU171 GLU172 PRO173 LEU174 ARG175 LYS176 THR177 TRP178 GLU179 PHE180 GLU181 GLU182
Unit 2 GLY1L ILE1P GLY2L THR2P GLY3L ALA3P ARG4 GLY4L PHE4P PRO5 SER5L GLY5N ASN5P TRP6 LEU6L LYS6N GLU6P PHE7 VAL7L LYS7N GLY7P LEU8 GLY8L VAL8N LEU8P GLU9 GLY9L LYS9P TYR10 GLY10L CYS11 SER11L LYS12 GLY12L SER13 GLY13L GLU14 GLY14L CYS15 GLY15L HIS16 SER16L PHE17 TYR18 ASN19 GLY20 THR21 GLN22 ARG23 VAL24 ARG25 LEU26 LEU27 VAL28 ARG29 TYR30 PHE31 TYR32 ASN33 LEU34 GLU35 GLU36 ASN37 LEU38 ARG39 PHE40 ASP41 SER42 ASP43 VAL44 GLY45 GLU46 PHE47 ARG48 ALA49 VAL50 THR51 GLU52 LEU53 GLY54 ARG55 PRO56 ASP57 ALA58 GLU59 ASN60 TRP61 ASN62 SER63 GLN64 PRO65 GLU66 PHE67 LEU68 GLU69 GLN70 LYS71 ARG72 ALA73 GLU74 VAL75 ASP76 THR77 VAL78 CYS79 ARG80 HIS81 ASN82 TYR83 GLU84 ILE85 PHE86 ASP87 ASN88 PHE89 LEU90 VAL91 PRO92 ARG93 ARG94 VAL95 GLU96 PRO97 THR98 VAL99 THR100 VAL101 TYR102 PRO103 THR104 LYS105 THR106 GLN107 PRO108 LEU109 GLU110 HIS111 HIS112 ASN113 LEU114 LEU115 VAL116 CYS117 SER118 VAL119 SER120 ASP121 PHE122 TYR123 PRO124 GLY125 ASN126 ILE127 GLU128 VAL129 ARG130 TRP131 PHE132 ARG133 ASN134 GLY135 LYS136 GLU137 GLU138 LYS139 THR140 GLY141 ILE142 VAL143 SER144 THR145 GLY146 LEU147 VAL148 ARG149 ASN150 GLY151 ASP152 TRP153 THR154 PHE155 GLN156 THR157 LEU158 VAL159 MET160 LEU161 GLU162 THR163 VAL164 PRO165 GLN166 SER167 GLY168 GLU169 VAL170 TYR171 THR172 CYS173 GLN174 VAL175 GLU176 HIS177 PRO178 SER179 LEU180 THR181 ASP182 PRO183 VAL184 THR185 VAL186 GLU187 TRP188
Unit 3 ILE1 LYS2 GLU3 GLU4 HIS5 THR6 ILE7 ILE8 GLN9 ALA10 GLU11 PHE12 TYR13 LEU14 LEU15 PRO16 ASP17 LYS18 ARG19 GLY20 GLU21 PHE22 MET23 PHE24 ASP25 PHE26 ASP27 GLY28 ASP29 GLU30 ILE31 PHE32 HIS33 VAL34 ASP35 ILE36 GLU37 LYS38 SER39 GLU40 THR41 ILE42 TRP43 ARG44 LEU45 GLU46 GLU47 PHE48 ALA49 LYS50 PHE51 ALA52 SER53 PHE54 GLU55 ALA56 GLN57 GLY58 ALA59 LEU60 ALA61 ASN62 ILE63 ALA64 VAL65 ASP66 LYS67 ALA68 ASN69 LEU70 ASP71 VAL72 MET73 LYS74 GLU75 ARG76 SER77 ASN78 ASN79 THR80 PRO81 ASP82 ALA83 ASN84 VAL85 ALA86 PRO87 GLU88 VAL89 THR90 VAL91 LEU92 SER93 ARG94 SER95 PRO96 VAL97 ASN98 LEU99 GLY100 GLU101 PRO102 ASN103 ILE104 LEU105 ILE106 CYS107 PHE108 ILE109 ASP110 LYS111 PHE112 SER113 PRO114 PRO115 VAL116 VAL117 ASN118 VAL119 THR120 TRP121 LEU122 ARG123 ASN124 GLY125 ARG126 PRO127 VAL128 THR129 GLU130 GLY131 VAL132 SER133 GLU134 THR135 VAL136 PHE137 LEU138 PRO139 ARG140 ASP141 ASP142 HIS143 LEU144 PHE145 ARG146 LYS147 PHE148 HIS149 TYR150 LEU151 THR152 PHE153 LEU154 PRO155 SER156 THR157 ASP158 ASP159 PHE160 TYR161 ASP162 CYS163 GLU164 VAL165 ASP166 HIS167 TRP168 GLY169 LEU170 GLU171 GLU172 PRO173 LEU174 ARG175 LYS176 THR177 TRP178 GLU179 PHE180 GLU181 GLU182
Unit 4 GLY1L ILE1P GLY2L THR2P GLY3L ALA3P ARG4 GLY4L PHE4P PRO5 SER5L GLY5N ASN5P TRP6 LEU6L LYS6N GLU6P PHE7 VAL7L LYS7N GLY7P LEU8 GLY8L VAL8N LEU8P GLU9 GLY9L LYS9P TYR10 GLY10L CYS11 SER11L LYS12 GLY12L SER13 GLY13L GLU14 GLY14L CYS15 GLY15L HIS16 SER16L PHE17 TYR18 ASN19 GLY20 THR21 GLN22 ARG23 VAL24 ARG25 LEU26 LEU27 VAL28 ARG29 TYR30 PHE31 TYR32 ASN33 LEU34 GLU35 GLU36 ASN37 LEU38 ARG39 PHE40 ASP41 SER42 ASP43 VAL44 GLY45 GLU46 PHE47 ARG48 ALA49 VAL50 THR51 GLU52 LEU53 GLY54 ARG55 PRO56 ASP57 ALA58 GLU59 ASN60 TRP61 ASN62 SER63 GLN64 PRO65 GLU66 PHE67 LEU68 GLU69 GLN70 LYS71 ARG72 ALA73 GLU74 VAL75 ASP76 THR77 VAL78 CYS79 ARG80 HIS81 ASN82 TYR83 GLU84 ILE85 PHE86 ASP87 ASN88 PHE89 LEU90 VAL91 PRO92 ARG93 ARG94 VAL95 GLU96 PRO97 THR98 VAL99 THR100 VAL101 TYR102 PRO103 THR104 LYS105 THR106 GLN107 PRO108 LEU109 GLU110 HIS111 HIS112 ASN113 LEU114 LEU115 VAL116 CYS117 SER118 VAL119 SER120 ASP121 PHE122 TYR123 PRO124 GLY125 ASN126 ILE127 GLU128 VAL129 ARG130 TRP131 PHE132 ARG133 ASN134 GLY135 LYS136 GLU137 GLU138 LYS139 THR140 GLY141 ILE142 VAL143 SER144 THR145 GLY146 LEU147 VAL148 ARG149 ASN150 GLY151 ASP152 TRP153 THR154 PHE155 GLN156 THR157 LEU158 VAL159 MET160 LEU161 GLU162 THR163 VAL164 PRO165 GLN166 SER167 GLY168 GLU169 VAL170 TYR171 THR172 CYS173 GLN174 VAL175 GLU176 HIS177 PRO178 SER179 LEU180 THR181 ASP182 PRO183 VAL184 THR185 VAL186 GLU187 TRP188

Ligands
Unit 5 NAG193 NAG194
Unit 6 NAG199
Unit 7 NAG193 NAG194
Unit 8 NAG199

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany