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Sequence, Chains, Asymmetric and Biological Units

Title CLASS II MHC I-AD IN COMPLEX WITH OVALBUMIN PEPTIDE 323-339
Keywords MHC II, CLASS II MHC, I-A, OVALBUMIN PEPTIDE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1IAO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MHC CLASS II I-AD  A 178 1417 0
2  Protein   MHC CLASS II I-AD  B 200 1596 0
3  Ligand   MHC CLASS II I-AD  B 1 0 14
4 Water     8 0 8
total       387 3013 22

Proteins
Unit 1 GLU1 ALA2 ASP3 HIS4 VAL5 GLY6 PHE7 TYR8 GLY9 THR10 THR11 VAL12 TYR13 GLN14 SER15 PRO16 GLY17 ASP18 ILE19 GLY20 GLN21 TYR22 THR23 HIS24 GLU25 PHE26 ASP27 GLY28 ASP29 GLU30 LEU31 PHE32 TYR33 VAL34 ASP35 LEU36 ASP37 LYS38 LYS39 LYS40 THR41 VAL42 TRP43 ARG44 LEU45 PRO46 GLU47 PHE48 GLY49 GLN50 LEU51 ILE52 LEU53 PHE54 GLU55 PRO56 GLN57 GLY58 GLY59 LEU60 GLN61 ASN62 ILE63 ALA64 ALA65 GLU66 LYS67 HIS68 ASN69 LEU70 GLY71 ILE72 LEU73 THR74 LYS75 ARG76 SER77 ASN78 PHE79 THR80 PRO81 ALA82 THR83 ASN84 GLU85 ALA86 PRO87 GLN88 ALA89 THR90 VAL91 PHE92 PRO93 LYS94 SER95 PRO96 VAL97 LEU98 LEU99 GLY100 GLN101 PRO102 ASN103 THR104 LEU105 ILE106 CYS107 PHE108 VAL109 ASP110 ASN111 ILE112 PHE113 PRO114 PRO115 VAL116 ILE117 ASN118 ILE119 THR120 TRP121 LEU122 ARG123 ASN124 SER125 LYS126 SER127 VAL128 THR129 ASP130 GLY131 VAL132 TYR133 GLU134 THR135 SER136 PHE137 LEU138 VAL139 ASN140 ARG141 ASP142 HIS143 SER144 PHE145 HIS146 LYS147 LEU148 SER149 TYR150 LEU151 THR152 PHE153 ILE154 PRO155 SER156 ASP157 ASP158 ASP159 ILE160 TYR161 ASP162 CYS163 LYS164 VAL165 GLU166 HIS167 TRP168 GLY169 LEU170 GLU171 GLU172 PRO173 VAL174 LEU175 LYS176 HIS177 TRP178
Unit 2 ARG1S SER1T GLY2S SER2T HIS6 PHE7 VAL8 VAL9 GLN10 PHE11 LYS12 GLY13 GLU14 CYS15 TYR16 TYR17 THR18 ASN19 GLY20 THR21 GLN22 ARG23 ILE24 ARG25 LEU26 VAL27 THR28 ARG29 TYR30 ILE31 TYR32 ASN33 ARG34 GLU35 GLU36 TYR37 VAL38 ARG39 TYR40 ASP41 SER42 ASP43 VAL44 GLY45 GLU46 TYR47 ARG48 ALA49 VAL50 THR51 GLU52 LEU53 GLY54 ARG55 PRO56 ASP57 ALA58 GLU59 TYR60 TRP61 ASN62 SER63 GLN64 PRO65 GLU66 ILE67 LEU68 ASP69 ARG70 THR71 ARG72 ALA73 GLU74 VAL75 ASP76 THR77 ALA78 CYS79 ARG80 HIS81 ASN82 TYR83 GLU84 GLY85 PRO86 GLU87 THR88 SER89 THR90 SER91 LEU92 ARG93 ARG94 LEU94A GLU95 GLN96 PRO97 ASN98 VAL99 ALA100 ILE101 SER102 LEU103 SER104 ARG105 THR106 GLU107 ALA108 LEU109 ASN110 HIS111 HIS112 ASN113 THR114 LEU115 VAL116 CYS117 SER118 VAL119 THR120 ASP121 PHE122 TYR123 PRO124 ALA125 LYS126 ILE127 LYS128 VAL129 ARG130 TRP131 PHE132 ARG133 ASN134 GLY135 GLN136 GLU137 GLU138 THR139 VAL140 GLY141 VAL142 SER143 SER144 THR145 GLN146 LEU147 ILE148 ARG149 ASN150 GLY151 ASP152 TRP153 THR154 PHE155 GLN156 VAL157 LEU158 VAL159 MET160 LEU161 GLU162 MET163 THR164 PRO165 HIS166 GLN167 GLY168 GLU169 VAL170 TYR171 THR172 CYS173 HIS174 VAL175 GLU176 HIS177 PRO178 SER179 LEU180 LYS181 SER182 PRO183 ILE184 THR185 VAL186 GLU187 TRP188 ILE323P SER324P GLN325P ALA326P VAL327P HIS328P ALA329P ALA330P HIS331P ALA332P GLU333P ILE334P

Ligands
Unit 3 NAG495

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany