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Sequence, Chains, Asymmetric and Biological Units

Title L-RHAMNOSE ISOMERASE
Keywords BETA-ALPHA-8-BARRELS, ALDOSE-KETOSE ISOMERIZATION, HYDRIDE S ISOMERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1D8W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-RHAMNOSE ISOMERASE  A 402 3155 64
2  Protein   L-RHAMNOSE ISOMERASE  B 402 3154 64
3  Protein   L-RHAMNOSE ISOMERASE  C 401 3147 64
4  Protein   L-RHAMNOSE ISOMERASE  D 403 3154 72
5  Ligand   L-RHAMNOSE ISOMERASE  A 1 0 1
6  Ligand   L-RHAMNOSE ISOMERASE  B 1 0 1
7  Ligand   L-RHAMNOSE ISOMERASE  C 1 0 1
8  Ligand   L-RHAMNOSE ISOMERASE  D 1 0 1
9 Water     1809 0 1809
total       3421 12610 2077

Proteins
Unit 1 THR11 GLN12 LEU13 GLU14 GLN15 ALA16 TRP17 GLU18 LEU19 ALA20 LYS21 GLN22 ARG23 PHE24 ALA25 ALA26 VAL27 GLY28 ILE29 ASP30 VAL31 GLU32 GLU33 ALA34 LEU35 ARG36 GLN37 LEU38 ASP39 ARG40 LEU41 PRO42 VAL43 SER44 MSE45 HIS46 CYS47 TRP48 GLN49 GLY50 ASP51 ASP52 VAL53 SER54 GLY55 PHE56 GLU57 ASN72 TYR73 PRO74 GLY75 LYS76 ALA77 ARG78 ASN79 ALA80 SER81 GLU82 LEU83 ARG84 ALA85 ASP86 LEU87 GLU88 GLN89 ALA90 MSE91 ARG92 LEU93 ILE94 PRO95 GLY96 PRO97 LYS98 ARG99 LEU100 ASN101 LEU102 HIS103 ALA104 ILE105 TYR106 LEU107 GLU108 SER109 ASP110 THR111 PRO112 VAL113 SER114 ARG115 ASP116 GLN117 ILE118 LYS119 PRO120 GLU121 HIS122 PHE123 LYS124 ASN125 TRP126 VAL127 GLU128 TRP129 ALA130 LYS131 ALA132 ASN133 GLN134 LEU135 GLY136 LEU137 ASP138 PHE139 ASN140 PRO141 SER142 CYS143 PHE144 SER145 HIS146 PRO147 LEU148 SER149 ALA150 ASP151 GLY152 PHE153 THR154 LEU155 SER156 HIS157 ALA158 ASP159 ASP160 SER161 ILE162 ARG163 GLN164 PHE165 TRP166 ILE167 ASP168 HIS169 CYS170 LYS171 ALA172 SER173 ARG174 ARG175 VAL176 SER177 ALA178 TYR179 PHE180 GLY181 GLU182 GLN183 LEU184 GLY185 THR186 PRO187 SER188 VAL189 MSE190 ASN191 ILE192 TRP193 ILE194 PRO195 ASP196 GLY197 MSE198 LYS199 ASP200 ILE201 THR202 VAL203 ASP204 ARG205 LEU206 ALA207 PRO208 ARG209 GLN210 ARG211 LEU212 LEU213 ALA214 ALA215 LEU216 ASP217 GLU218 VAL219 ILE220 SER221 GLU222 LYS223 LEU224 ASN225 PRO226 ALA227 HIS228 HIS229 ILE230 ASP231 ALA232 VAL233 GLU234 SER235 LYS236 LEU237 PHE238 GLY239 ILE240 GLY241 ALA242 GLU243 SER244 TYR245 THR246 VAL247 GLY248 SER249 ASN250 GLU251 PHE252 TYR253 MSE254 GLY255 TYR256 ALA257 THR258 SER259 ARG260 GLN261 THR262 ALA263 LEU264 CYS265 LEU266 ASP267 ALA268 GLY269 HIS270 PHE271 HIS272 PRO273 THR274 GLU275 VAL276 ILE277 SER278 ASP279 LYS280 ILE281 SER282 ALA283 ALA284 MSE285 LEU286 TYR287 VAL288 PRO289 GLN290 LEU291 LEU292 LEU293 HIS294 VAL295 SER296 ARG297 PRO298 VAL299 ARG300 TRP301 ASP302 SER303 ASP304 HIS305 VAL306 VAL307 LEU308 LEU309 ASP310 ASP311 GLU312 THR313 GLN314 ALA315 ILE316 ALA317 SER318 GLU319 ILE320 VAL321 ARG322 HIS323 ASP324 LEU325 PHE326 ASP327 ARG328 VAL329 HIS330 ILE331 GLY332 LEU333 ASP334 PHE335 PHE336 ASP337 ALA338 SER339 ILE340 ASN341 ARG342 ILE343 ALA344 ALA345 TRP346 VAL347 ILE348 GLY349 THR350 ARG351 ASN352 MSE353 LYS354 LYS355 ALA356 LEU357 LEU358 ARG359 ALA360 LEU361 LEU362 GLU363 PRO364 THR365 ALA366 GLU367 LEU368 ARG369 LYS370 LEU371 GLU372 ALA373 PRO374 GLY375 ASP376 TYR377 THR378 ALA379 ARG380 LEU381 ALA382 LEU383 LEU384 GLU385 GLU386 GLN387 LYS388 SER389 LEU390 PRO391 TRP392 GLN393 ALA394 VAL395 TRP396 GLU397 MSE398 TYR399 CYS400 GLN401 ARG402 HIS403 ASP404 THR405 PRO406 ALA407 GLY408 SER409 GLU410 TRP411 LEU412 GLU413 SER414 VAL415 ARG416 ALA417 TYR418 GLU419 LYS420 GLU421 ILE422 LEU423 SER424 ARG425 ARG426
Unit 2 THR10 THR11 GLN12 LEU13 GLU14 GLN15 ALA16 TRP17 GLU18 LEU19 ALA20 LYS21 GLN22 ARG23 PHE24 ALA25 ALA26 VAL27 GLY28 ILE29 ASP30 VAL31 GLU32 GLU33 ALA34 LEU35 ARG36 GLN37 LEU38 ASP39 ARG40 LEU41 PRO42 VAL43 SER44 MSE45 HIS46 CYS47 TRP48 GLN49 GLY50 ASP51 ASP52 VAL53 SER54 GLY55 PHE56 GLU57 TYR73 PRO74 GLY75 LYS76 ALA77 ARG78 ASN79 ALA80 SER81 GLU82 LEU83 ARG84 ALA85 ASP86 LEU87 GLU88 GLN89 ALA90 MSE91 ARG92 LEU93 ILE94 PRO95 GLY96 PRO97 LYS98 ARG99 LEU100 ASN101 LEU102 HIS103 ALA104 ILE105 TYR106 LEU107 GLU108 SER109 ASP110 THR111 PRO112 VAL113 SER114 ARG115 ASP116 GLN117 ILE118 LYS119 PRO120 GLU121 HIS122 PHE123 LYS124 ASN125 TRP126 VAL127 GLU128 TRP129 ALA130 LYS131 ALA132 ASN133 GLN134 LEU135 GLY136 LEU137 ASP138 PHE139 ASN140 PRO141 SER142 CYS143 PHE144 SER145 HIS146 PRO147 LEU148 SER149 ALA150 ASP151 GLY152 PHE153 THR154 LEU155 SER156 HIS157 ALA158 ASP159 ASP160 SER161 ILE162 ARG163 GLN164 PHE165 TRP166 ILE167 ASP168 HIS169 CYS170 LYS171 ALA172 SER173 ARG174 ARG175 VAL176 SER177 ALA178 TYR179 PHE180 GLY181 GLU182 GLN183 LEU184 GLY185 THR186 PRO187 SER188 VAL189 MSE190 ASN191 ILE192 TRP193 ILE194 PRO195 ASP196 GLY197 MSE198 LYS199 ASP200 ILE201 THR202 VAL203 ASP204 ARG205 LEU206 ALA207 PRO208 ARG209 GLN210 ARG211 LEU212 LEU213 ALA214 ALA215 LEU216 ASP217 GLU218 VAL219 ILE220 SER221 GLU222 LYS223 LEU224 ASN225 PRO226 ALA227 HIS228 HIS229 ILE230 ASP231 ALA232 VAL233 GLU234 SER235 LYS236 LEU237 PHE238 GLY239 ILE240 GLY241 ALA242 GLU243 SER244 TYR245 THR246 VAL247 GLY248 SER249 ASN250 GLU251 PHE252 TYR253 MSE254 GLY255 TYR256 ALA257 THR258 SER259 ARG260 GLN261 THR262 ALA263 LEU264 CYS265 LEU266 ASP267 ALA268 GLY269 HIS270 PHE271 HIS272 PRO273 THR274 GLU275 VAL276 ILE277 SER278 ASP279 LYS280 ILE281 SER282 ALA283 ALA284 MSE285 LEU286 TYR287 VAL288 PRO289 GLN290 LEU291 LEU292 LEU293 HIS294 VAL295 SER296 ARG297 PRO298 VAL299 ARG300 TRP301 ASP302 SER303 ASP304 HIS305 VAL306 VAL307 LEU308 LEU309 ASP310 ASP311 GLU312 THR313 GLN314 ALA315 ILE316 ALA317 SER318 GLU319 ILE320 VAL321 ARG322 HIS323 ASP324 LEU325 PHE326 ASP327 ARG328 VAL329 HIS330 ILE331 GLY332 LEU333 ASP334 PHE335 PHE336 ASP337 ALA338 SER339 ILE340 ASN341 ARG342 ILE343 ALA344 ALA345 TRP346 VAL347 ILE348 GLY349 THR350 ARG351 ASN352 MSE353 LYS354 LYS355 ALA356 LEU357 LEU358 ARG359 ALA360 LEU361 LEU362 GLU363 PRO364 THR365 ALA366 GLU367 LEU368 ARG369 LYS370 LEU371 GLU372 ALA373 PRO374 GLY375 ASP376 TYR377 THR378 ALA379 ARG380 LEU381 ALA382 LEU383 LEU384 GLU385 GLU386 GLN387 LYS388 SER389 LEU390 PRO391 TRP392 GLN393 ALA394 VAL395 TRP396 GLU397 MSE398 TYR399 CYS400 GLN401 ARG402 HIS403 ASP404 THR405 PRO406 ALA407 GLY408 SER409 GLU410 TRP411 LEU412 GLU413 SER414 VAL415 ARG416 ALA417 TYR418 GLU419 LYS420 GLU421 ILE422 LEU423 SER424 ARG425 ARG426
Unit 3 THR11 GLN12 LEU13 GLU14 GLN15 ALA16 TRP17 GLU18 LEU19 ALA20 LYS21 GLN22 ARG23 PHE24 ALA25 ALA26 VAL27 GLY28 ILE29 ASP30 VAL31 GLU32 GLU33 ALA34 LEU35 ARG36 GLN37 LEU38 ASP39 ARG40 LEU41 PRO42 VAL43 SER44 MSE45 HIS46 CYS47 TRP48 GLN49 GLY50 ASP51 ASP52 VAL53 SER54 GLY55 PHE56 GLU57 TYR73 PRO74 GLY75 LYS76 ALA77 ARG78 ASN79 ALA80 SER81 GLU82 LEU83 ARG84 ALA85 ASP86 LEU87 GLU88 GLN89 ALA90 MSE91 ARG92 LEU93 ILE94 PRO95 GLY96 PRO97 LYS98 ARG99 LEU100 ASN101 LEU102 HIS103 ALA104 ILE105 TYR106 LEU107 GLU108 SER109 ASP110 THR111 PRO112 VAL113 SER114 ARG115 ASP116 GLN117 ILE118 LYS119 PRO120 GLU121 HIS122 PHE123 LYS124 ASN125 TRP126 VAL127 GLU128 TRP129 ALA130 LYS131 ALA132 ASN133 GLN134 LEU135 GLY136 LEU137 ASP138 PHE139 ASN140 PRO141 SER142 CYS143 PHE144 SER145 HIS146 PRO147 LEU148 SER149 ALA150 ASP151 GLY152 PHE153 THR154 LEU155 SER156 HIS157 ALA158 ASP159 ASP160 SER161 ILE162 ARG163 GLN164 PHE165 TRP166 ILE167 ASP168 HIS169 CYS170 LYS171 ALA172 SER173 ARG174 ARG175 VAL176 SER177 ALA178 TYR179 PHE180 GLY181 GLU182 GLN183 LEU184 GLY185 THR186 PRO187 SER188 VAL189 MSE190 ASN191 ILE192 TRP193 ILE194 PRO195 ASP196 GLY197 MSE198 LYS199 ASP200 ILE201 THR202 VAL203 ASP204 ARG205 LEU206 ALA207 PRO208 ARG209 GLN210 ARG211 LEU212 LEU213 ALA214 ALA215 LEU216 ASP217 GLU218 VAL219 ILE220 SER221 GLU222 LYS223 LEU224 ASN225 PRO226 ALA227 HIS228 HIS229 ILE230 ASP231 ALA232 VAL233 GLU234 SER235 LYS236 LEU237 PHE238 GLY239 ILE240 GLY241 ALA242 GLU243 SER244 TYR245 THR246 VAL247 GLY248 SER249 ASN250 GLU251 PHE252 TYR253 MSE254 GLY255 TYR256 ALA257 THR258 SER259 ARG260 GLN261 THR262 ALA263 LEU264 CYS265 LEU266 ASP267 ALA268 GLY269 HIS270 PHE271 HIS272 PRO273 THR274 GLU275 VAL276 ILE277 SER278 ASP279 LYS280 ILE281 SER282 ALA283 ALA284 MSE285 LEU286 TYR287 VAL288 PRO289 GLN290 LEU291 LEU292 LEU293 HIS294 VAL295 SER296 ARG297 PRO298 VAL299 ARG300 TRP301 ASP302 SER303 ASP304 HIS305 VAL306 VAL307 LEU308 LEU309 ASP310 ASP311 GLU312 THR313 GLN314 ALA315 ILE316 ALA317 SER318 GLU319 ILE320 VAL321 ARG322 HIS323 ASP324 LEU325 PHE326 ASP327 ARG328 VAL329 HIS330 ILE331 GLY332 LEU333 ASP334 PHE335 PHE336 ASP337 ALA338 SER339 ILE340 ASN341 ARG342 ILE343 ALA344 ALA345 TRP346 VAL347 ILE348 GLY349 THR350 ARG351 ASN352 MSE353 LYS354 LYS355 ALA356 LEU357 LEU358 ARG359 ALA360 LEU361 LEU362 GLU363 PRO364 THR365 ALA366 GLU367 LEU368 ARG369 LYS370 LEU371 GLU372 ALA373 PRO374 GLY375 ASP376 TYR377 THR378 ALA379 ARG380 LEU381 ALA382 LEU383 LEU384 GLU385 GLU386 GLN387 LYS388 SER389 LEU390 PRO391 TRP392 GLN393 ALA394 VAL395 TRP396 GLU397 MSE398 TYR399 CYS400 GLN401 ARG402 HIS403 ASP404 THR405 PRO406 ALA407 GLY408 SER409 GLU410 TRP411 LEU412 GLU413 SER414 VAL415 ARG416 ALA417 TYR418 GLU419 LYS420 GLU421 ILE422 LEU423 SER424 ARG425 ARG426
Unit 4 MSE9 THR10 THR11 GLN12 LEU13 GLU14 GLN15 ALA16 TRP17 GLU18 LEU19 ALA20 LYS21 GLN22 ARG23 PHE24 ALA25 ALA26 VAL27 GLY28 ILE29 ASP30 VAL31 GLU32 GLU33 ALA34 LEU35 ARG36 GLN37 LEU38 ASP39 ARG40 LEU41 PRO42 VAL43 SER44 MSE45 HIS46 CYS47 TRP48 GLN49 GLY50 ASP51 ASP52 VAL53 SER54 GLY55 PHE56 GLU57 TYR73 PRO74 GLY75 LYS76 ALA77 ARG78 ASN79 ALA80 SER81 GLU82 LEU83 ARG84 ALA85 ASP86 LEU87 GLU88 GLN89 ALA90 MSE91 ARG92 LEU93 ILE94 PRO95 GLY96 PRO97 LYS98 ARG99 LEU100 ASN101 LEU102 HIS103 ALA104 ILE105 TYR106 LEU107 GLU108 SER109 ASP110 THR111 PRO112 VAL113 SER114 ARG115 ASP116 GLN117 ILE118 LYS119 PRO120 GLU121 HIS122 PHE123 LYS124 ASN125 TRP126 VAL127 GLU128 TRP129 ALA130 LYS131 ALA132 ASN133 GLN134 LEU135 GLY136 LEU137 ASP138 PHE139 ASN140 PRO141 SER142 CYS143 PHE144 SER145 HIS146 PRO147 LEU148 SER149 ALA150 ASP151 GLY152 PHE153 THR154 LEU155 SER156 HIS157 ALA158 ASP159 ASP160 SER161 ILE162 ARG163 GLN164 PHE165 TRP166 ILE167 ASP168 HIS169 CYS170 LYS171 ALA172 SER173 ARG174 ARG175 VAL176 SER177 ALA178 TYR179 PHE180 GLY181 GLU182 GLN183 LEU184 GLY185 THR186 PRO187 SER188 VAL189 MSE190 ASN191 ILE192 TRP193 ILE194 PRO195 ASP196 GLY197 MSE198 LYS199 ASP200 ILE201 THR202 VAL203 ASP204 ARG205 LEU206 ALA207 PRO208 ARG209 GLN210 ARG211 LEU212 LEU213 ALA214 ALA215 LEU216 ASP217 GLU218 VAL219 ILE220 SER221 GLU222 LYS223 LEU224 ASN225 PRO226 ALA227 HIS228 HIS229 ILE230 ASP231 ALA232 VAL233 GLU234 SER235 LYS236 LEU237 PHE238 GLY239 ILE240 GLY241 ALA242 GLU243 SER244 TYR245 THR246 VAL247 GLY248 SER249 ASN250 GLU251 PHE252 TYR253 MSE254 GLY255 TYR256 ALA257 THR258 SER259 ARG260 GLN261 THR262 ALA263 LEU264 CYS265 LEU266 ASP267 ALA268 GLY269 HIS270 PHE271 HIS272 PRO273 THR274 GLU275 VAL276 ILE277 SER278 ASP279 LYS280 ILE281 SER282 ALA283 ALA284 MSE285 LEU286 TYR287 VAL288 PRO289 GLN290 LEU291 LEU292 LEU293 HIS294 VAL295 SER296 ARG297 PRO298 VAL299 ARG300 TRP301 ASP302 SER303 ASP304 HIS305 VAL306 VAL307 LEU308 LEU309 ASP310 ASP311 GLU312 THR313 GLN314 ALA315 ILE316 ALA317 SER318 GLU319 ILE320 VAL321 ARG322 HIS323 ASP324 LEU325 PHE326 ASP327 ARG328 VAL329 HIS330 ILE331 GLY332 LEU333 ASP334 PHE335 PHE336 ASP337 ALA338 SER339 ILE340 ASN341 ARG342 ILE343 ALA344 ALA345 TRP346 VAL347 ILE348 GLY349 THR350 ARG351 ASN352 MSE353 LYS354 LYS355 ALA356 LEU357 LEU358 ARG359 ALA360 LEU361 LEU362 GLU363 PRO364 THR365 ALA366 GLU367 LEU368 ARG369 LYS370 LEU371 GLU372 ALA373 PRO374 GLY375 ASP376 TYR377 THR378 ALA379 ARG380 LEU381 ALA382 LEU383 LEU384 GLU385 GLU386 GLN387 LYS388 SER389 LEU390 PRO391 TRP392 GLN393 ALA394 VAL395 TRP396 GLU397 MSE398 TYR399 CYS400 GLN401 ARG402 HIS403 ASP404 THR405 PRO406 ALA407 GLY408 SER409 GLU410 TRP411 LEU412 GLU413 SER414 VAL415 ARG416 ALA417 TYR418 GLU419 LYS420 GLU421 ILE422 LEU423 SER424 ARG425 ARG426

Ligands
Unit 5 ZN450
Unit 6 ZN450
Unit 7 ZN450
Unit 8 ZN450

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany