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Sequence, Chains, Asymmetric and Biological Units

Title N-TERMINAL TWO DOMAINS OF HUMAN CD46 (MEMBRANE COFACTOR PROT
Keywords VIRUS RECEPTOR, COMPLEMENT COFACTOR, SHORT CONSENSUS REPEAT, MEASLES VIRUS, GLYCOPROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1CKL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN (CD46)  A 126 1018 0
2  Protein   PROTEIN (CD46)  B 126 1018 0
3  Protein   PROTEIN (CD46)  C 126 1018 0
4  Protein   PROTEIN (CD46)  D 126 1018 0
5  Protein   PROTEIN (CD46)  E 126 1018 0
6  Protein   PROTEIN (CD46)  F 126 1018 0
7  Ligand    G 8 0 94
8  Ligand    H 4 0 50
9  Ligand    I 3 0 39
10  Ligand    J 3 0 39
11  Ligand    K 2 0 28
12  Ligand    L 2 0 28
13  Ligand    M 2 0 28
14  Ligand    N 5 0 61
15  Ligand    O 3 0 39
16  Ligand    P 8 0 94
17  Ligand    Q 6 0 72
18  Ligand    R 5 0 61
19  Ligand   PROTEIN (CD46)  A 2 0 2
20  Ligand   PROTEIN (CD46)  B 2 0 2
21  Ligand   PROTEIN (CD46)  C 1 0 1
22  Ligand   PROTEIN (CD46)  D 2 0 2
23  Ligand   PROTEIN (CD46)  E 2 0 2
24  Ligand   PROTEIN (CD46)  F 2 0 2
25 Water     12 0 12
total       830 6108 656
Proteins
Unit 1 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 2 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 3 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 4 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 5 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 6 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Ligands
Unit 7 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7 MAN8
Unit 8 NAG1 NAG2 BMA3 MAN4
Unit 9 NAG1 NAG2 BMA3
Unit 10 NAG1 NAG2 BMA3
Unit 11 NAG1 NAG2
Unit 12 NAG1 NAG2
Unit 13 NAG1 NAG2
Unit 14 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 15 NAG1 NAG2 BMA3
Unit 16 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7 MAN8
Unit 17 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6
Unit 18 NAG1 NAG2 BMA3 MAN4 MAN5
Unit 19 CL1042 CA1057
Unit 20 CL2042 CA2057
Unit 21 CA3057
Unit 22 CL4042 CA4057
Unit 23 CL5042 CA5057
Unit 24 CL6042 CA6057
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany