2TRA | TRNA07 - JenaLib

Title :   RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS

Authors :   E. Westhof, P. Dumas, D. Moras

Date :   06 Nov 87 (Deposition) - 06 Nov 87 (Release) - 22 Jun 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.00

Chains :   Asym./Biol. Unit : A

Keywords :   T-Rna, Single Strand, Loops (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Westhof, P. Dumas, D. Moras
Restrained Refinement Of Two Crystalline Forms Of Yeast Aspartic Acid And Phenylalanine Transfer Rna Crystals.
Acta Crystallogr. , Sect. A V. 44 112 1988
PubMed-ID: 3272146 | Reference-DOI: 10.1107/S010876738700446X
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (7, 10)

Asymmetric/Biological Unit (7, 10)

No.	Name	Count	Type	Full Name
1	1MG	1	Mod. Nucleotide	1N-METHYLGUANOSINE-5'-MONOPHOSPHATE
2	5MC	1	Mod. Nucleotide	5-METHYLCYTIDINE-5'-MONOPHOSPHATE
3	5MU	1	Mod. Nucleotide	5-METHYLURIDINE 5'-MONOPHOSPHATE
4	H2U	2	Mod. Nucleotide	5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
5	MG	1	Ligand/Ion	MAGNESIUM ION
6	PSU	3	Mod. Nucleotide	PSEUDOURIDINE-5'-MONOPHOSPHATE
7	SPM	1	Ligand/Ion	SPERMINE

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	U A:5 , G A:6 , H2U A:19 , G A:67 , HOH A:147 , HOH A:150 , HOH A:161	BINDING SITE FOR RESIDUE SPM A 76
2	AC2	SOFTWARE	C A:31 , HOH A:166 , HOH A:167 , HOH A:168 , HOH A:169 , HOH A:170 , HOH A:171	BINDING SITE FOR RESIDUE MG A 77

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:73
                                                                                                        
                  2tra A  1 UCCGUGAUAGUUuAAuGGuCAGAAUGGGCGCuUGUCgCGUGCCAGAUcGGGGuuCAAUUCCCCGUCGCGGAGC 73
                                    10  |  |  20        30 |    | 40       |50  ||    60        70   
                                       13-PSU |           32-PSU|         48-5MC||                   
                                          16-H2U               37-1MG          53-5MU                
                                             19-H2U                             54-PSU

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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