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(-) Description

Title :  PSORALEN CROSS-LINKED D(CCGGTACCGG) FORMS HOLLIDAY JUNCTION
 
Authors :  B. F. Eichman, B. H. M. Mooers, M. Alberti, J. E. Hearst, P. S. Ho
Date :  02 Aug 00  (Deposition) - 21 Apr 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Psoralen, Cross-Linked Dna, Holliday Junction, Dna-Drug Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. F. Eichman, B. H. Mooers, M. Alberti, J. E. Hearst, P. S. Ho
The Crystal Structures Of Psoralen Cross-Linked Dnas: Drug-Dependent Formation Of Holliday Junctions.
J. Mol. Biol. V. 308 15 2001
PubMed-ID: 11302703  |  Reference-DOI: 10.1006/JMBI.2001.4567
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
    Chains: A, B
    Engineered: YES
    Other Details: DNA IS CROSS-LINKED BY PSORALEN
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1PSO1Ligand/Ion4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1PSO2Ligand/Ion4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDT A:5 , DA A:6 , DT B:15 , DA B:16BINDING SITE FOR RESIDUE PSO B 21

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1FHZ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:10
                                         
                  1fhz A  1 CCGGTACCGG 10
                                    10


Chain B from PDB  Type:DNA  Length:10
                                         
                  1fhz B 11 CCGGTACCGG 20
                                    20
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1FHZ)

(-) CATH Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  1fhz
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 Related Entries

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