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(-) Description

Title :  CRYSTAL STRUCTURE OF THE RNA OCTAMER GIC(GA)GCC
 
Authors :  S. B. Jang, K. Baeyens, M. S. Jeong, J. Santalucia Jr, D. Turner, S. R. Holbrook
Date :  09 Feb 04  (Deposition) - 18 May 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E  (2x)
Keywords :  Rna Double Helix, Rna Tandem G-A Base Pair (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. B. Jang, K. Baeyens, M. S. Jeong, J. Santalucia, D. Turner, S. R. Holbrook
Structures Of Two Rna Octamers Containing Tandem G. A Base Pairs.
Acta Crystallogr. , Sect. D V. 60 829 2004
PubMed-ID: 15103128  |  Reference-DOI: 10.1107/S0907444904003804
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-R(*GP*IP*CP*GP*AP*GP*CP*C)-3'
    Chains: A, B, C, D, E
    Engineered: YES
    Other Details: RNA DOUBLE HELIX
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12345
Asymmetric Unit : ABCDE
Biological Unit 1 (1x): AB   
Biological Unit 2 (1x):   CD 
Biological Unit 3 (2x):     E

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

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   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:7
                                       
                 1saq A 101 GCGAGCC 108
                            ||     
                            ||     
                          101|     
                           103     


Chain B from PDB  Type:RNA  Length:7
                                       
                 1saq B 109 GCGAGCC 116
                            ||     
                          109|     
                           111     


Chain C from PDB  Type:RNA  Length:7
                                       
                 1saq C 201 GCGAGCC 208
                            ||     
                          201|     
                           203     


Chain D from PDB  Type:RNA  Length:7
                                       
                 1saq D 209 GCGAGCC 216
                            ||     
                          209|     
                           211     


Chain E from PDB  Type:RNA  Length:7
                                       
                 1saq E 301 GCGAGCC 308
                            ||     
                          301|     
                           303
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(-) Related Entries Specified in the PDB File

1sa9 RNA OCTAMER GGCGAGCC