1DNO | AH0007 - JenaLib

Title :   A-DNA/RNA DODECAMER R(GCG)D(TATACGC) MG BINDING SITES

Authors :   H. Robinson, Y. -G. Gao, R. Sanishvili, A. Joachimiak, A. H. -J. Wang

Date :   16 Dec 99 (Deposition) - 10 Apr 00 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.40

Chains :   Asym./Biol. Unit : A,B

Keywords :   Dna Conformation, Rna/Dna Hybrid, Metal Ions, Dna/Rna Complex, Dna/Rna Hybrid Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Robinson, Y. G. Gao, R. Sanishvili, A. Joachimiak, A. H. Wang
Hexahydrated Magnesium Ions Bind In The Deep Major Groove And At The Outer Mouth Of A-Form Nucleic Acid Duplexes.
Nucleic Acids Res. V. 28 1760 2000
PubMed-ID: 10734195 | Reference-DOI: 10.1093/NAR/28.8.1760
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 4)

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HOH B:197 , HOH B:198 , HOH B:199 , HOH B:200 , HOH B:201 , HOH B:202	BINDING SITE FOR RESIDUE MG B 21
2	AC2	SOFTWARE	HOH A:205 , HOH B:203 , HOH B:204 , HOH B:206 , HOH B:207 , HOH B:208	BINDING SITE FOR RESIDUE MG B 22
3	AC3	SOFTWARE	HOH B:209 , HOH B:210 , HOH B:211 , HOH B:212 , HOH B:213 , HOH B:214	BINDING SITE FOR RESIDUE MG B 23
4	AC4	SOFTWARE	HOH A:215 , HOH A:216 , HOH A:217 , HOH A:218 , HOH B:219 , HOH B:220	BINDING SITE FOR RESIDUE MG A 24

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:DNA/RNA  Length:10
                                         
                  1dno A  1 GCGTATACGC 10
                                    10

Chain B from PDB  Type:DNA/RNA  Length:10
                                         
                  1dno B 11 GCGTATACGC 20
                                    20

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Classification and Annotation

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Gene Ontology (0, 0)

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